BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_L04
(804 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-3487|AAF46914.1| 140|Drosophila melanogaster CG3661-PA... 189 4e-48
M85295-1|AAA28867.1| 140|Drosophila melanogaster ribosomal prot... 174 1e-43
U43733-1|AAA86639.1| 904|Drosophila melanogaster Abrupt protein. 29 5.6
BT003807-1|AAO41490.1| 369|Drosophila melanogaster AT11330p pro... 29 5.6
BT001583-1|AAN71338.1| 894|Drosophila melanogaster RE25924p pro... 29 5.6
AE014134-2051|AAN10774.1| 894|Drosophila melanogaster CG4807-PB... 29 5.6
AE014134-2050|AAF53087.2| 904|Drosophila melanogaster CG4807-PA... 29 5.6
Z11527-1|CAA77616.1| 614|Drosophila melanogaster CYS3HIS finger... 29 7.4
BT021256-1|AAX33404.1| 608|Drosophila melanogaster RE58038p pro... 29 7.4
AE014297-3282|AAO41594.1| 599|Drosophila melanogaster CG4620-PB... 29 7.4
AE014297-3281|AAO41593.1| 599|Drosophila melanogaster CG4620-PA... 29 7.4
Z46891-1|CAA86993.1| 828|Drosophila melanogaster Calpain protein. 29 9.8
X78555-2|CAA55298.1| 828|Drosophila melanogaster calpain protein. 29 9.8
X78555-1|CAA55297.1| 805|Drosophila melanogaster calpain protein. 29 9.8
AY051678-1|AAK93102.1| 828|Drosophila melanogaster LD22862p pro... 29 9.8
AE013599-2880|AAF57563.1| 828|Drosophila melanogaster CG7563-PB... 29 9.8
>AE013599-3487|AAF46914.1| 140|Drosophila melanogaster CG3661-PA
protein.
Length = 140
Score = 189 bits (460), Expect = 4e-48
Identities = 89/93 (95%), Positives = 91/93 (97%)
Frame = +2
Query: 206 IKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGV 385
I+GRLNRLPAAG GDM VATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGV
Sbjct: 45 IRGRLNRLPAAGVGDMFVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGV 104
Query: 386 IVNNKGEMKGSAITGPVAKECADLWPRIASNAN 484
IVNNKGEMKGSAITGPVAKECADLWPRIASNA+
Sbjct: 105 IVNNKGEMKGSAITGPVAKECADLWPRIASNAS 137
Score = 70.1 bits (164), Expect = 3e-12
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = +1
Query: 100 AGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQG 204
AG KFRISLGLPVGAV+NCADNTGAKNLYVIAV G
Sbjct: 10 AGGKFRISLGLPVGAVMNCADNTGAKNLYVIAVHG 44
>M85295-1|AAA28867.1| 140|Drosophila melanogaster ribosomal protein
L17A protein.
Length = 140
Score = 174 bits (424), Expect = 1e-43
Identities = 83/93 (89%), Positives = 85/93 (91%)
Frame = +2
Query: 206 IKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGV 385
I+GRLNRLPAAG GDM VATVKKGKPELRKKV RQRKPFRRRDGVFIYFEDNAGV
Sbjct: 45 IRGRLNRLPAAGVGDMFVATVKKGKPELRKKVSVVPSARQRKPFRRRDGVFIYFEDNAGV 104
Query: 386 IVNNKGEMKGSAITGPVAKECADLWPRIASNAN 484
IVNNKGEMKGSAITGPVAKECADLWPRIASNA+
Sbjct: 105 IVNNKGEMKGSAITGPVAKECADLWPRIASNAS 137
Score = 70.1 bits (164), Expect = 3e-12
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = +1
Query: 100 AGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQG 204
AG KFRISLGLPVGAV+NCADNTGAKNLYVIAV G
Sbjct: 10 AGGKFRISLGLPVGAVMNCADNTGAKNLYVIAVHG 44
>U43733-1|AAA86639.1| 904|Drosophila melanogaster Abrupt protein.
Length = 904
Score = 29.5 bits (63), Expect = 5.6
Identities = 25/59 (42%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -1
Query: 378 ALSSKYINTPSRLLNG-FRCLMTTAGITFFRSSGLPFLTVATIMSPEPAAGSLF-RRPL 208
A+ N P LL G F AG F SG P LT+ IM E AAG+L RPL
Sbjct: 785 AMGHSLDNLPPGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPL 842
>BT003807-1|AAO41490.1| 369|Drosophila melanogaster AT11330p
protein.
Length = 369
Score = 29.5 bits (63), Expect = 5.6
Identities = 25/59 (42%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -1
Query: 378 ALSSKYINTPSRLLNG-FRCLMTTAGITFFRSSGLPFLTVATIMSPEPAAGSLF-RRPL 208
A+ N P LL G F AG F SG P LT+ IM E AAG+L RPL
Sbjct: 250 AMGHSLDNLPPGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPL 307
>BT001583-1|AAN71338.1| 894|Drosophila melanogaster RE25924p
protein.
Length = 894
Score = 29.5 bits (63), Expect = 5.6
Identities = 25/59 (42%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -1
Query: 378 ALSSKYINTPSRLLNG-FRCLMTTAGITFFRSSGLPFLTVATIMSPEPAAGSLF-RRPL 208
A+ N P LL G F AG F SG P LT+ IM E AAG+L RPL
Sbjct: 775 AMGHSLDNLPPGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPL 832
>AE014134-2051|AAN10774.1| 894|Drosophila melanogaster CG4807-PB,
isoform B protein.
Length = 894
Score = 29.5 bits (63), Expect = 5.6
Identities = 25/59 (42%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -1
Query: 378 ALSSKYINTPSRLLNG-FRCLMTTAGITFFRSSGLPFLTVATIMSPEPAAGSLF-RRPL 208
A+ N P LL G F AG F SG P LT+ IM E AAG+L RPL
Sbjct: 775 AMGHSLDNLPPGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPL 832
>AE014134-2050|AAF53087.2| 904|Drosophila melanogaster CG4807-PA,
isoform A protein.
Length = 904
Score = 29.5 bits (63), Expect = 5.6
Identities = 25/59 (42%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -1
Query: 378 ALSSKYINTPSRLLNG-FRCLMTTAGITFFRSSGLPFLTVATIMSPEPAAGSLF-RRPL 208
A+ N P LL G F AG F SG P LT+ IM E AAG+L RPL
Sbjct: 785 AMGHSLDNLPPGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPL 842
>Z11527-1|CAA77616.1| 614|Drosophila melanogaster CYS3HIS finger
protein protein.
Length = 614
Score = 29.1 bits (62), Expect = 7.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 320 RQRKPFRRRDGVFIYFEDN 376
R+R+P R+RDG F Y DN
Sbjct: 72 RRRRPVRKRDGTFNYSADN 90
>BT021256-1|AAX33404.1| 608|Drosophila melanogaster RE58038p
protein.
Length = 608
Score = 29.1 bits (62), Expect = 7.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 320 RQRKPFRRRDGVFIYFEDN 376
R+R+P R+RDG F Y DN
Sbjct: 66 RRRRPVRKRDGTFNYSADN 84
>AE014297-3282|AAO41594.1| 599|Drosophila melanogaster CG4620-PB,
isoform B protein.
Length = 599
Score = 29.1 bits (62), Expect = 7.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 320 RQRKPFRRRDGVFIYFEDN 376
R+R+P R+RDG F Y DN
Sbjct: 57 RRRRPVRKRDGTFNYSADN 75
>AE014297-3281|AAO41593.1| 599|Drosophila melanogaster CG4620-PA,
isoform A protein.
Length = 599
Score = 29.1 bits (62), Expect = 7.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 320 RQRKPFRRRDGVFIYFEDN 376
R+R+P R+RDG F Y DN
Sbjct: 57 RRRRPVRKRDGTFNYSADN 75
>Z46891-1|CAA86993.1| 828|Drosophila melanogaster Calpain protein.
Length = 828
Score = 28.7 bits (61), Expect = 9.8
Identities = 23/85 (27%), Positives = 35/85 (41%)
Frame = -3
Query: 463 RPQISTFFGYRPCDGRALHFALVIDYDTRIVLKVYKYSITPSERFPLPDDHCRHYLFPEF 284
RPQ FF Y+ GR+ HF + R L Y I PS P + +F E
Sbjct: 489 RPQGLNFFRYKSSVGRSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSET 548
Query: 283 RFTLFDCGHNHVPGTGRRQSVQATF 209
+ + + +HV G+ ++ F
Sbjct: 549 QNNMEE-NDDHVGYGGKADTITPGF 572
>X78555-2|CAA55298.1| 828|Drosophila melanogaster calpain protein.
Length = 828
Score = 28.7 bits (61), Expect = 9.8
Identities = 23/85 (27%), Positives = 35/85 (41%)
Frame = -3
Query: 463 RPQISTFFGYRPCDGRALHFALVIDYDTRIVLKVYKYSITPSERFPLPDDHCRHYLFPEF 284
RPQ FF Y+ GR+ HF + R L Y I PS P + +F E
Sbjct: 489 RPQGLNFFRYKSSVGRSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSET 548
Query: 283 RFTLFDCGHNHVPGTGRRQSVQATF 209
+ + + +HV G+ ++ F
Sbjct: 549 QNNMEE-NDDHVGYGGKADTITPGF 572
>X78555-1|CAA55297.1| 805|Drosophila melanogaster calpain protein.
Length = 805
Score = 28.7 bits (61), Expect = 9.8
Identities = 23/85 (27%), Positives = 35/85 (41%)
Frame = -3
Query: 463 RPQISTFFGYRPCDGRALHFALVIDYDTRIVLKVYKYSITPSERFPLPDDHCRHYLFPEF 284
RPQ FF Y+ GR+ HF + R L Y I PS P + +F E
Sbjct: 466 RPQGLNFFRYKSSVGRSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSET 525
Query: 283 RFTLFDCGHNHVPGTGRRQSVQATF 209
+ + + +HV G+ ++ F
Sbjct: 526 QNNMEE-NDDHVGYGGKADTITPGF 549
>AY051678-1|AAK93102.1| 828|Drosophila melanogaster LD22862p
protein.
Length = 828
Score = 28.7 bits (61), Expect = 9.8
Identities = 23/85 (27%), Positives = 35/85 (41%)
Frame = -3
Query: 463 RPQISTFFGYRPCDGRALHFALVIDYDTRIVLKVYKYSITPSERFPLPDDHCRHYLFPEF 284
RPQ FF Y+ GR+ HF + R L Y I PS P + +F E
Sbjct: 489 RPQGLNFFRYKSSVGRSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSET 548
Query: 283 RFTLFDCGHNHVPGTGRRQSVQATF 209
+ + + +HV G+ ++ F
Sbjct: 549 QNNMEE-NDDHVGYGGKADTITPGF 572
>AE013599-2880|AAF57563.1| 828|Drosophila melanogaster CG7563-PB,
isoform B protein.
Length = 828
Score = 28.7 bits (61), Expect = 9.8
Identities = 23/85 (27%), Positives = 35/85 (41%)
Frame = -3
Query: 463 RPQISTFFGYRPCDGRALHFALVIDYDTRIVLKVYKYSITPSERFPLPDDHCRHYLFPEF 284
RPQ FF Y+ GR+ HF + R L Y I PS P + +F E
Sbjct: 489 RPQGLNFFRYKSSVGRSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSET 548
Query: 283 RFTLFDCGHNHVPGTGRRQSVQATF 209
+ + + +HV G+ ++ F
Sbjct: 549 QNNMEE-NDDHVGYGGKADTITPGF 572
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,956,862
Number of Sequences: 53049
Number of extensions: 562729
Number of successful extensions: 1531
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1531
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3757402116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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