Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_L03
(867 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S57284-1|AAB25906.1| 437|Caenorhabditis elegans S-adenosylhomoc... 338 4e-93
M64306-1|AAA28062.1| 437|Caenorhabditis elegans S-adenosylhomoc... 338 4e-93
AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical ... 338 4e-93
AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical ... 29 3.3
U50199-6|AAA91266.1| 470|Caenorhabditis elegans Vacuolar h atpa... 29 4.3
Z22174-1|CAA80128.1| 732|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z81137-1|CAB03469.2| 503|Caenorhabditis elegans Hypothetical pr... 28 7.5
AF125959-3|AAD14731.1| 531|Caenorhabditis elegans Udp-glucurono... 28 7.5
>S57284-1|AAB25906.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 338 bits (830), Expect = 4e-93
Identities = 161/222 (72%), Positives = 181/222 (81%)
Frame = +3
Query: 201 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVL 380
KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVL
Sbjct: 5 KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64
Query: 381 IETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDG 560
IETL LGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EY WCIEQT++F DG
Sbjct: 65 IETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDG 124
Query: 561 KPLNMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVND 740
+PLNMILDDGGDLTNLVH KYP L ++G++EETTTGVHNL KM +G LKVPAINVND
Sbjct: 125 QPLNMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAKMLAKGDLKVPAINVND 184
Query: 741 SVTKSKFDNLYGCRESLLDGIKRAQT**LPGXFVXWQVMGDV 866
SVTKSKFDNLYG RESL DGIKRA L G GDV
Sbjct: 185 SVTKSKFDNLYGIRESLPDGIKRATDVMLAGKVAVVAGYGDV 226
>M64306-1|AAA28062.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 338 bits (830), Expect = 4e-93
Identities = 161/222 (72%), Positives = 181/222 (81%)
Frame = +3
Query: 201 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVL 380
KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVL
Sbjct: 5 KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64
Query: 381 IETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDG 560
IETL LGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EY WCIEQT++F DG
Sbjct: 65 IETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDG 124
Query: 561 KPLNMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVND 740
+PLNMILDDGGDLTNLVH KYP L ++G++EETTTGVHNL KM +G LKVPAINVND
Sbjct: 125 QPLNMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAKMLAKGDLKVPAINVND 184
Query: 741 SVTKSKFDNLYGCRESLLDGIKRAQT**LPGXFVXWQVMGDV 866
SVTKSKFDNLYG RESL DGIKRA L G GDV
Sbjct: 185 SVTKSKFDNLYGIRESLPDGIKRATDVMLAGKVAVVAGYGDV 226
>AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical
protein K02F2.2 protein.
Length = 437
Score = 338 bits (830), Expect = 4e-93
Identities = 161/222 (72%), Positives = 181/222 (81%)
Frame = +3
Query: 201 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVL 380
KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVL
Sbjct: 5 KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64
Query: 381 IETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDG 560
IETL LGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EY WCIEQT++F DG
Sbjct: 65 IETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDG 124
Query: 561 KPLNMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVND 740
+PLNMILDDGGDLTNLVH KYP L ++G++EETTTGVHNL KM +G LKVPAINVND
Sbjct: 125 QPLNMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAKMLAKGDLKVPAINVND 184
Query: 741 SVTKSKFDNLYGCRESLLDGIKRAQT**LPGXFVXWQVMGDV 866
SVTKSKFDNLYG RESL DGIKRA L G GDV
Sbjct: 185 SVTKSKFDNLYGIRESLPDGIKRATDVMLAGKVAVVAGYGDV 226
>AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical
protein H16O14.1 protein.
Length = 977
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -2
Query: 464 CSCGLVLCTI-NVTAGPLYLCSQFY*SLNKNRCLYCHV*AAGYSGTFEYFSWSI 306
C CG+++ I N+TA Y +N L + + G+ F YF WS+
Sbjct: 442 CECGILIAVIENITALITQFFLMCYLGVNAACALQSLLKSPGWRPGFRYFHWSL 495
>U50199-6|AAA91266.1| 470|Caenorhabditis elegans Vacuolar h atpase
protein 15 protein.
Length = 470
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 624 PDLLKDVKGITEETTTGVHNL 686
PDL DVK +TEE T VH+L
Sbjct: 316 PDLEDDVKFLTEELTLSVHDL 336
>Z22174-1|CAA80128.1| 732|Caenorhabditis elegans Hypothetical
protein K01B6.1 protein.
Length = 732
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/69 (21%), Positives = 36/69 (52%)
Frame = -2
Query: 239 FSQFLVSDFVRRLHFVVQSLIYLR*IHLLFSFEVIFIKIPGNKLGLDIVERVRVHRTLRI 60
F F++SD +R + V+S + ++ ++F+ + IK+ L +++ + ++
Sbjct: 421 FQSFVLSDDMRTVVEEVRSRVSIQLFEVMFAIHRMDIKVLNQNLVDSLLQIAPTNSDAQL 480
Query: 59 LEEQQNLKD 33
L + +NL D
Sbjct: 481 LRKMENLSD 489
>Z81137-1|CAB03469.2| 503|Caenorhabditis elegans Hypothetical
protein W02D9.1 protein.
Length = 503
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = -2
Query: 266 C*HNFFSAPFSQFLVSDFVRRLHFVVQSLIYLR*IHLLFSF-EVIFIKIPGNKLGLDIVE 90
C N F AP F DF+ + + + ++L+ F F +++ I + K + +
Sbjct: 190 CQFNLFEAPNKTFYKVDFIDAIELIRRGSVHLKKGFAYFPFDDLVTILVTKMKNNM-MAA 248
Query: 89 RVRVHRTLRILEEQQNL 39
R + L ILEE+ L
Sbjct: 249 MARSFKHLAILEEEGRL 265
>AF125959-3|AAD14731.1| 531|Caenorhabditis elegans
Udp-glucuronosyltransferase protein14 protein.
Length = 531
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 690 KMFREGLLKVPAINVNDSVTKSKFDNLYGCRESL 791
+M+ LLK+P+I + SV F+N +G SL
Sbjct: 154 EMYLAHLLKIPSIPIKSSVRYPAFNNAFGQPSSL 187
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,538,891
Number of Sequences: 27780
Number of extensions: 422707
Number of successful extensions: 1020
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -