Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_L01
         (866 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.             26   1.3  
AJ302662-1|CAC35527.1|   76|Anopheles gambiae gSG9 protein protein.    25   3.0  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   6.9  

>U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.
          Length = 278

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +1

Query: 61  KRNGR-VSTHFKLWQRTRYSTRVPWVFPPRV*KISTL 168
           K NGR + TH+   Q  R +     +FPPR+ K STL
Sbjct: 155 KYNGRSLQTHWLSEQCNRLNGTDGSIFPPRITKNSTL 191


>AJ302662-1|CAC35527.1|   76|Anopheles gambiae gSG9 protein protein.
          Length = 76

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -1

Query: 350 RHHFKPFIHQHHGVYPSTTSGVQNSLAAVVLQETDQEV 237
           RH   PF  Q++  Y S  S    S AA V+Q ++  V
Sbjct: 20  RHQCSPFFFQYNRPYLSQPSSQLASTAANVVQRSNVTV 57


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +3

Query: 537 LSXEYGDQRMXKLCLSNFAKCLXPGGLLFI 626
           LS E    R    C+S+F   L P  LLF+
Sbjct: 194 LSSEISTLRSLHDCISSFTLRLKPSDLLFV 223


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 774,754
Number of Sequences: 2352
Number of extensions: 15852
Number of successful extensions: 31
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92613024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)