Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_K21
(883 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC30B4.04c |sol1||SWI/SNF complex subunit Sol1|Schizosaccharom... 30 0.50
SPAC767.01c |vps1|SPAC9G1.14c|dynamin family protein Vps1|Schizo... 29 0.66
SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 29 0.88
SPCC757.07c |ctt1|cta1|catalase|Schizosaccharomyces pombe|chr 3|... 28 2.0
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 2.7
SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces p... 27 2.7
SPCC1827.08c |pof7|SPCC70.11c|F-box protein Pof7|Schizosaccharom... 27 3.5
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 3.5
SPBC16C6.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 4.7
>SPBC30B4.04c |sol1||SWI/SNF complex subunit
Sol1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 865
Score = 29.9 bits (64), Expect = 0.50
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Frame = +2
Query: 410 SRQLAEPSHWDSLNSPLIQDEGDGKTLKLRFDVSQYTP--EEIVVKTVDNXLLVHAKHEE 583
SRQ++ + W +++ L D +L +++ S P E + L AK
Sbjct: 235 SRQVSAHNFWPKISASLGFPSPDAISLLIQYYNSYLLPYEEAWLAAQQQQKSLQQAKANH 294
Query: 584 KSDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLP 712
++ +S + Y ++ P T PEA+ ++ S G L ++P P
Sbjct: 295 SANVQSRPKNYPQK---PVQTTPEAVHANGSMHGSLHSKSPSP 334
>SPAC767.01c |vps1|SPAC9G1.14c|dynamin family protein
Vps1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 678
Score = 29.5 bits (63), Expect = 0.66
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = -2
Query: 666 DLMASGFVPLGNKNSLLYSLYTDFVSDFSSCLAWTSNXLSTVLTTISSG 520
+L + G P+G+ +S++ +L TDF +++ + + S LS T +S G
Sbjct: 327 ELHSLGDTPVGDNSSIVLNLITDFCNEYRTVVDGRSEELSA--TELSGG 373
>SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 486
Score = 29.1 bits (62), Expect = 0.88
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +3
Query: 627 FCCPREQILR--PLSLRCPGTVCLPWKRHCHNSPSRTGTFLSRXTXRSHHSP 776
F CP L P++L C GTVC R+ ++S S SR +H P
Sbjct: 17 FICPGCNCLPDWPVTLPCGGTVCRKCFRNAYSSESSGKVSPSRCCFYNHKKP 68
>SPCC757.07c |ctt1|cta1|catalase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 512
Score = 27.9 bits (59), Expect = 2.0
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +2
Query: 236 GDFSVIDTEFSS-IRERFDAEMRKMEEEMSK 325
G F+ +D+E IRE +AE++KMEE+ K
Sbjct: 468 GVFTRVDSELGRRIREATEAEVKKMEEKAPK 498
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.5 bits (58), Expect = 2.7
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Frame = +3
Query: 327 SDQNS*TEKATISSRAQLARRHLHSIVTADSLP-SPVTGIA*TRRSFKTRVTARLSSFAL 503
S NS T AT +S L+ + + +A S P S V T S T +T+ ++S
Sbjct: 426 SSANSTT--ATSASSTPLSSVNSTTATSASSTPLSSVNSTTATSAS-STPLTS-VNSTTA 481
Query: 504 MSASILPKRSLLRLSTTNYWSTPNTRRNLIRNLCTENTTGSF 629
SAS P S+ S T+ STP T N + +T S+
Sbjct: 482 TSASSTPLTSVNSTSATSASSTPLTSANSTTSTSVSSTAPSY 523
>SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 669
Score = 27.5 bits (58), Expect = 2.7
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Frame = +2
Query: 434 HWDSLNSPLIQDEG---DGKTLKLRFDVSQYTPEEI-----VVKTVDNXLLVHAKHEEKS 589
+++S P+ DEG D + + RF + + I ++ V + + + H ++S
Sbjct: 305 NFNSYIKPVAGDEGRVEDEEFEENRFSIEDIEIDSIPAVRRLLGDVMSDIPYYMSHHKES 364
Query: 590 DTKSVYREYNREFLLPKGTNP 652
KSV RE NR + L K NP
Sbjct: 365 IIKSVIREANRVYHLWKDCNP 385
>SPCC1827.08c |pof7|SPCC70.11c|F-box protein
Pof7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 361
Score = 27.1 bits (57), Expect = 3.5
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 539 KTVDNXLLVHAKHEEKSDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEA-PLPQ 715
++++ L H HE D +S+YR R L + E + S S + +LTV + P P
Sbjct: 42 ESLNKYRLAHKVHE---DVESIYRRLERLQLCKRNEEEEMLNSDAS-EAMLTVSSVPSPT 97
Query: 716 L 718
L
Sbjct: 98 L 98
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.1 bits (57), Expect = 3.5
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Frame = -2
Query: 732 LSVMXSCGNGASTVSTPSR-----DSEDLMASGFVPLGNKN----SLLYSLYTDFVSDFS 580
+S S + ST+ST S S L S +P + + S++ S T +S S
Sbjct: 484 ISSSSSASSPQSTLSTSSEVVSEVSSTLLSGSSAIPSTSSSTPSSSIISSPMTSVLSSSS 543
Query: 579 SCLAWTSNXLSTVLTTISSGV 517
S +S+ S+ +TTISSG+
Sbjct: 544 SIPTSSSSDFSSSITTISSGI 564
>SPBC16C6.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 350
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 58 YSGRLMISTCLVSRRVRIIPVKRVYARTFQCLF 156
+SGR+ S C V RR ++P +++ R L+
Sbjct: 137 HSGRISKSLCPVLRRKSLLPKPKMFQRVASALY 169
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,011,416
Number of Sequences: 5004
Number of extensions: 60165
Number of successful extensions: 181
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 181
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 442483990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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