Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_K17
(904 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73905-1|CAA98110.1| 244|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z70754-10|CAA94779.2| 273|Caenorhabditis elegans Hypothetical p... 44 1e-04
Z70753-13|CAA94770.2| 273|Caenorhabditis elegans Hypothetical p... 44 1e-04
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 38 0.007
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 38 0.013
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 38 0.013
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 38 0.013
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 38 0.013
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 38 0.013
Z71185-1|CAA94903.1| 290|Caenorhabditis elegans Hypothetical pr... 36 0.030
U40415-8|AAP68935.1| 294|Caenorhabditis elegans Aquaporin or aq... 36 0.040
U40415-7|AAP68934.1| 258|Caenorhabditis elegans Aquaporin or aq... 36 0.040
U20864-5|AAN65321.1| 295|Caenorhabditis elegans Aquaporin or aq... 36 0.052
U20864-4|AAC46664.2| 304|Caenorhabditis elegans Aquaporin or aq... 36 0.052
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 33 0.21
AL034365-7|CAA22259.1| 421|Caenorhabditis elegans Hypothetical ... 32 0.49
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 32 0.65
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 31 0.85
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 31 0.85
Z35595-2|CAA84642.1| 285|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z35595-1|CAA84633.1| 290|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical pr... 29 4.5
U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific ... 28 7.9
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 28 7.9
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 28 7.9
>Z73905-1|CAA98110.1| 244|Caenorhabditis elegans Hypothetical
protein C32C4.2 protein.
Length = 244
Score = 56.0 bits (129), Expect = 3e-08
Identities = 27/52 (51%), Positives = 32/52 (61%)
Frame = +2
Query: 266 HPAFAFGFVVLGNAMAFGPTSGAHMNPAVTLAAALQGRMSPALAAXYTVAQV 421
H AFA G + A FG SGAH+NPAVT AL GR+SP A Y V+Q+
Sbjct: 43 HAAFAHGVAIFVLAATFGGVSGAHINPAVTFGIALVGRISPIHAVCYVVSQL 94
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 278 AFGFVVLGNAMAFGPTSGAHMNPAVTLAAALQGRM 382
A GF ++ +A G SGA MNPA + + G++
Sbjct: 163 AIGFSLIIEILAAGAISGASMNPARSFGPNIMGQV 197
>Z70754-10|CAA94779.2| 273|Caenorhabditis elegans Hypothetical
protein F40F9.9 protein.
Length = 273
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/52 (44%), Positives = 28/52 (53%)
Frame = +2
Query: 266 HPAFAFGFVVLGNAMAFGPTSGAHMNPAVTLAAALQGRMSPALAAXYTVAQV 421
H AFA GF + AFG SG H NPAV+ A A G+M Y V+Q+
Sbjct: 76 HAAFAHGFTIFILVTAFGHISGGHFNPAVSWAIAGAGKMPIFHLPFYVVSQL 127
>Z70753-13|CAA94770.2| 273|Caenorhabditis elegans Hypothetical
protein F40F9.9 protein.
Length = 273
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/52 (44%), Positives = 28/52 (53%)
Frame = +2
Query: 266 HPAFAFGFVVLGNAMAFGPTSGAHMNPAVTLAAALQGRMSPALAAXYTVAQV 421
H AFA GF + AFG SG H NPAV+ A A G+M Y V+Q+
Sbjct: 76 HAAFAHGFTIFILVTAFGHISGGHFNPAVSWAIAGAGKMPIFHLPFYVVSQL 127
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 38.3 bits (85), Expect = 0.007
Identities = 25/73 (34%), Positives = 28/73 (38%)
Frame = -3
Query: 890 GXGVXXGGXXXXXGXGPXXXXGGGGGXXRGXGGXXGXXXPSXPQ*XWQMXXYXAGGGXXG 711
G G GG G G GGGGG G GG G S + + GGG G
Sbjct: 135 GGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAP-SGGGGCGG 193
Query: 710 GXXSGXXXRGVSP 672
G SG V+P
Sbjct: 194 GGSSGGGGYAVAP 206
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 38.3 bits (85), Expect = 0.007
Identities = 25/73 (34%), Positives = 28/73 (38%)
Frame = -3
Query: 890 GXGVXXGGXXXXXGXGPXXXXGGGGGXXRGXGGXXGXXXPSXPQ*XWQMXXYXAGGGXXG 711
G G GG G G GGGGG G GG G S + + GGG G
Sbjct: 135 GGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAP-SGGGGCGG 193
Query: 710 GXXSGXXXRGVSP 672
G SG V+P
Sbjct: 194 GGSSGGGGYAVAP 206
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 37.5 bits (83), Expect = 0.013
Identities = 26/78 (33%), Positives = 27/78 (34%), Gaps = 1/78 (1%)
Frame = -3
Query: 890 GXGVXXGGXXXXXGXGPXXXXGGGGGXXRGXGGXXGXXXP-SXPQ*XWQMXXYXAGGGXX 714
G G GG G GP GGGG +G GG G P Q W GGG
Sbjct: 259 GWGQQGGGGQGGWG-GPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGGPQQGGGGGGW 317
Query: 713 GGXXSGXXXRGVSPGXNQ 660
GG G G Q
Sbjct: 318 GGQGQQQGGWGGQSGAQQ 335
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 37.5 bits (83), Expect = 0.013
Identities = 26/78 (33%), Positives = 27/78 (34%), Gaps = 1/78 (1%)
Frame = -3
Query: 890 GXGVXXGGXXXXXGXGPXXXXGGGGGXXRGXGGXXGXXXP-SXPQ*XWQMXXYXAGGGXX 714
G G GG G GP GGGG +G GG G P Q W GGG
Sbjct: 222 GWGQQGGGGQGGWG-GPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGGPQQGGGGGGW 280
Query: 713 GGXXSGXXXRGVSPGXNQ 660
GG G G Q
Sbjct: 281 GGQGQQQGGWGGQSGAQQ 298
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/83 (28%), Positives = 24/83 (28%)
Frame = -3
Query: 902 GXXWGXGVXXGGXXXXXGXGPXXXXGGGGGXXRGXGGXXGXXXPSXPQ*XWQMXXYXAGG 723
G WG GG G G G GGG G G G Q W GG
Sbjct: 188 GGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQG----GGGQGGWGGPQQQQGG 243
Query: 722 GXXGGXXSGXXXRGVSPGXNQXG 654
G G G P Q G
Sbjct: 244 GGWGQQGGGGQGGWGGPQQQQQG 266
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 37.5 bits (83), Expect = 0.013
Identities = 26/78 (33%), Positives = 27/78 (34%), Gaps = 1/78 (1%)
Frame = -3
Query: 890 GXGVXXGGXXXXXGXGPXXXXGGGGGXXRGXGGXXGXXXP-SXPQ*XWQMXXYXAGGGXX 714
G G GG G GP GGGG +G GG G P Q W GGG
Sbjct: 221 GWGQQGGGGQGGWG-GPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGGPQQGGGGGGW 279
Query: 713 GGXXSGXXXRGVSPGXNQ 660
GG G G Q
Sbjct: 280 GGQGQQQGGWGGQSGAQQ 297
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 37.5 bits (83), Expect = 0.013
Identities = 26/78 (33%), Positives = 27/78 (34%), Gaps = 1/78 (1%)
Frame = -3
Query: 890 GXGVXXGGXXXXXGXGPXXXXGGGGGXXRGXGGXXGXXXP-SXPQ*XWQMXXYXAGGGXX 714
G G GG G GP GGGG +G GG G P Q W GGG
Sbjct: 260 GWGQQGGGGQGGWG-GPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGGPQQGGGGGGW 318
Query: 713 GGXXSGXXXRGVSPGXNQ 660
GG G G Q
Sbjct: 319 GGQGQQQGGWGGQSGAQQ 336
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/83 (28%), Positives = 24/83 (28%)
Frame = -3
Query: 902 GXXWGXGVXXGGXXXXXGXGPXXXXGGGGGXXRGXGGXXGXXXPSXPQ*XWQMXXYXAGG 723
G WG GG G G G GGG G G G Q W GG
Sbjct: 226 GGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQG----GGGQGGWGGPQQQQGG 281
Query: 722 GXXGGXXSGXXXRGVSPGXNQXG 654
G G G P Q G
Sbjct: 282 GGWGQQGGGGQGGWGGPQQQQQG 304
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 37.5 bits (83), Expect = 0.013
Identities = 26/78 (33%), Positives = 27/78 (34%), Gaps = 1/78 (1%)
Frame = -3
Query: 890 GXGVXXGGXXXXXGXGPXXXXGGGGGXXRGXGGXXGXXXP-SXPQ*XWQMXXYXAGGGXX 714
G G GG G GP GGGG +G GG G P Q W GGG
Sbjct: 259 GWGQQGGGGQGGWG-GPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGGPQQGGGGGGW 317
Query: 713 GGXXSGXXXRGVSPGXNQ 660
GG G G Q
Sbjct: 318 GGQGQQQGGWGGQSGAQQ 335
>Z71185-1|CAA94903.1| 290|Caenorhabditis elegans Hypothetical
protein C35A5.1 protein.
Length = 290
Score = 36.3 bits (80), Expect = 0.030
Identities = 20/71 (28%), Positives = 29/71 (40%)
Frame = +2
Query: 206 VWLGVSSVVPYKGKEAVVLSHPAFAFGFVVLGNAMAFGPTSGAHMNPAVTLAAALQGRMS 385
++ G Y + V L+H A G + FG SG H NP V+ A L ++
Sbjct: 31 IFSGTMQANVYDISQPVGLTHAALTHGLATIVVIAVFGKISGGHFNPVVSWAMVLCQKLH 90
Query: 386 PALAAXYTVAQ 418
P Y +Q
Sbjct: 91 PFELPFYMFSQ 101
>U40415-8|AAP68935.1| 294|Caenorhabditis elegans Aquaporin or
aquaglyceroporin relatedprotein 8, isoform b protein.
Length = 294
Score = 35.9 bits (79), Expect = 0.040
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +2
Query: 266 HPAFAFGFVVLGNAMAFGPTSGAHMNPAVTLAAALQGRMSPALAAXYTVAQV 421
H A+ GF+ A SG H+NPA+++A ++ G + P Y +AQV
Sbjct: 56 HIAWGIGFMFAVYLAA--SVSGGHLNPAISVAQSILGNLPPWKIIPYAIAQV 105
>U40415-7|AAP68934.1| 258|Caenorhabditis elegans Aquaporin or
aquaglyceroporin relatedprotein 8, isoform a protein.
Length = 258
Score = 35.9 bits (79), Expect = 0.040
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +2
Query: 266 HPAFAFGFVVLGNAMAFGPTSGAHMNPAVTLAAALQGRMSPALAAXYTVAQV 421
H A+ GF+ A SG H+NPA+++A ++ G + P Y +AQV
Sbjct: 56 HIAWGIGFMFAVYLAA--SVSGGHLNPAISVAQSILGNLPPWKIIPYAIAQV 105
>U20864-5|AAN65321.1| 295|Caenorhabditis elegans Aquaporin or
aquaglyceroporin relatedprotein 1, isoform b protein.
Length = 295
Score = 35.5 bits (78), Expect = 0.052
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +2
Query: 281 FGFVVLGNAMAFGPTSGAHMNPAVTLAAALQGRMSPALAAXYTVAQ 418
+GF ++ MA SG H+NPAV+L G + A Y +AQ
Sbjct: 64 WGFAIMFAVMATARMSGGHLNPAVSLLLWSLGHLKLAWVPLYAIAQ 109
>U20864-4|AAC46664.2| 304|Caenorhabditis elegans Aquaporin or
aquaglyceroporin relatedprotein 1, isoform a protein.
Length = 304
Score = 35.5 bits (78), Expect = 0.052
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +2
Query: 281 FGFVVLGNAMAFGPTSGAHMNPAVTLAAALQGRMSPALAAXYTVAQ 418
+GF ++ MA SG H+NPAV+L G + A Y +AQ
Sbjct: 73 WGFAIMFAVMATARMSGGHLNPAVSLLLWSLGHLKLAWVPLYAIAQ 118
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 33.5 bits (73), Expect = 0.21
Identities = 21/78 (26%), Positives = 24/78 (30%)
Frame = -3
Query: 902 GXXWGXGVXXGGXXXXXGXGPXXXXGGGGGXXRGXGGXXGXXXPSXPQ*XWQMXXYXAGG 723
G WG G GG G GG GG GG G + W GG
Sbjct: 54 GGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGGGGRGDWGGNNNGGGG 113
Query: 722 GXXGGXXSGXXXRGVSPG 669
GG + G + G
Sbjct: 114 NWGGGGNNDGGWGGNNGG 131
Score = 33.1 bits (72), Expect = 0.28
Identities = 24/83 (28%), Positives = 27/83 (32%)
Frame = -3
Query: 893 WGXGVXXGGXXXXXGXGPXXXXGGGGGXXRGXGGXXGXXXPSXPQ*XWQMXXYXAGGGXX 714
WG G GG G G GGGG G G G + GGG
Sbjct: 20 WGPGGWGGGPGRWGGWGGNRWGGGGGPGGWGNNGGGGWGR-GGGRGGGDWGGNNGGGGNW 78
Query: 713 GGXXSGXXXRGVSPGXNQXGPPR 645
GG G G + G + G R
Sbjct: 79 GGNGGGRGDWGGNGGGGRGGGGR 101
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -3
Query: 902 GXXWGXGVXXGGXXXXXGXGPXXXXGGGGGXXRGXGGXXG 783
G WG G GG G G G GGG G G G
Sbjct: 37 GNRWGGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGG 76
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 5/41 (12%)
Frame = -3
Query: 890 GXGVXXGGXXXXXGXGPXXXXGGG-----GGXXRGXGGXXG 783
G G GG G GP GGG GG RG GG G
Sbjct: 132 GGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRG 172
Score = 28.7 bits (61), Expect = 6.0
Identities = 22/74 (29%), Positives = 22/74 (29%), Gaps = 3/74 (4%)
Frame = -3
Query: 893 WGXGVXXGGXXXXXG---XGPXXXXGGGGGXXRGXGGXXGXXXPSXPQ*XWQMXXYXAGG 723
WG GG G G GGGG RG GG G GG
Sbjct: 104 WGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGG 163
Query: 722 GXXGGXXSGXXXRG 681
G GG G G
Sbjct: 164 GRGGGGGRGGGGGG 177
>AL034365-7|CAA22259.1| 421|Caenorhabditis elegans Hypothetical
protein Y69E1A.7 protein.
Length = 421
Score = 32.3 bits (70), Expect = 0.49
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 281 FGFVVLGNAMAFGPTSGAHMNPAVTLAAALQGRMSPALAAXYTVAQ 418
+G V++ + SGAH+NPAV+ QG+++ Y VAQ
Sbjct: 161 WGLVLMLAVLMGSKISGAHLNPAVSFFQLTQGKINLIRFLVYAVAQ 206
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 31.9 bits (69), Expect = 0.65
Identities = 24/83 (28%), Positives = 24/83 (28%)
Frame = -3
Query: 902 GXXWGXGVXXGGXXXXXGXGPXXXXGGGGGXXRGXGGXXGXXXPSXPQ*XWQMXXYXAGG 723
G WG G G G G GGG G GG G GG
Sbjct: 52 GPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGG---GGGGGGRGGGG 108
Query: 722 GXXGGXXSGXXXRGVSPGXNQXG 654
G GG G RG G G
Sbjct: 109 GGRGGGGGGGGGRGGGGGGRGGG 131
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 31.5 bits (68), Expect = 0.85
Identities = 25/81 (30%), Positives = 26/81 (32%), Gaps = 2/81 (2%)
Frame = -3
Query: 890 GXGVXXGGXXXXXGXG--PXXXXGGGGGXXRGXGGXXGXXXPSXPQ*XWQMXXYXAGGGX 717
G G GG G G GGGG G G G Q W GG
Sbjct: 134 GWGGQQGGNSNAGGWGGSQGGQNGGGGRGGSGGQGGWGGSQDGGSQGGWG----GQNGGG 189
Query: 716 XGGXXSGXXXRGVSPGXNQXG 654
GG G RG + G Q G
Sbjct: 190 QGGNQGGGGGRGGNQGGEQGG 210
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical protein
F26C11.3 protein.
Length = 1317
Score = 31.5 bits (68), Expect = 0.85
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -2
Query: 384 DMRPCSAAASVTAGFMCAPDVGPNAIA-LPSTTNPKAKAGCDSTTASFPLYGTTELTPS 211
D C A +S T M G ++ ++ NP + ++TT ++P GTT + PS
Sbjct: 1128 DAEGCKATSSGTTSTMSPGTTGGTTVSRTTNSNNPIDSSTLETTTFAWPTGGTTRMLPS 1186
>Z35595-2|CAA84642.1| 285|Caenorhabditis elegans Hypothetical
protein C01G6.1b protein.
Length = 285
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 281 FGFVVLGNAMAFGPTSGAHMNPAVTLAAALQGRMSPALAAXYTVAQ 418
FG ++ SG H+NPAV+ A G+++ Y VAQ
Sbjct: 58 FGIAIVFGVAVSAKLSGGHINPAVSFAFLSVGQITIVQFIAYFVAQ 103
>Z35595-1|CAA84633.1| 290|Caenorhabditis elegans Hypothetical
protein C01G6.1a protein.
Length = 290
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 281 FGFVVLGNAMAFGPTSGAHMNPAVTLAAALQGRMSPALAAXYTVAQ 418
FG ++ SG H+NPAV+ A G+++ Y VAQ
Sbjct: 58 FGIAIVFGVAVSAKLSGGHINPAVSFAFLSVGQITIVQFIAYFVAQ 103
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/61 (32%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Frame = -3
Query: 845 GPXXXXGGGGGXXRG--XGGXXGXXXPSXPQ*XWQMXXYXAGGGXXGGXXSGXXXRGVSP 672
GP GGGGG G GG G S GGG GG +G G
Sbjct: 781 GPTGSSGGGGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGG 840
Query: 671 G 669
G
Sbjct: 841 G 841
>Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical
protein C01G6.5 protein.
Length = 952
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = -2
Query: 354 VTAGFMCAPDVGPNAIALPSTTNPKAKAGCDST 256
V AG CA D+GP PSTTN + DST
Sbjct: 164 VFAGTACAKDIGPRE---PSTTNKVLQQEADST 193
>Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical
protein K07F5.11 protein.
Length = 290
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/59 (33%), Positives = 21/59 (35%)
Frame = -3
Query: 845 GPXXXXGGGGGXXRGXGGXXGXXXPSXPQ*XWQMXXYXAGGGXXGGXXSGXXXRGVSPG 669
G GGGGG G G G Q + GGG GG SG G PG
Sbjct: 208 GSMSGGGGGGGATSGYFGV-GQGVMGGGGAVGQSAYFGVGGGAAGGAKSGGGGGGGIPG 265
>U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific
family, class qprotein 2 protein.
Length = 405
Score = 28.3 bits (60), Expect = 7.9
Identities = 22/70 (31%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
Frame = -3
Query: 872 GGXXXXXGXGPXXXX--GGGGGXXRGXGGXXGXXXPSXPQ*XWQMXXYXAGGGXXGGXXS 699
GG G P GGGGG G G G Q + GGG GG +
Sbjct: 312 GGGASALGAAPPAGSMSGGGGGATSGYFGV-GQGVMGGGGAVGQSAYFGVGGGAAGGAKT 370
Query: 698 GXXXRGVSPG 669
G G PG
Sbjct: 371 GGGGGGGIPG 380
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 851 GXGPXXXXGGGGGXXRGXGGXXGXXXPSXP 762
G GP GGGGG RG GG G P
Sbjct: 615 GGGPGG-PGGGGGPPRGPGGGGGGGPTGPP 643
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 851 GXGPXXXXGGGGGXXRGXGGXXGXXXPSXP 762
G GP GGGGG RG GG G P
Sbjct: 615 GGGPGG-PGGGGGPPRGPGGGGGGGPTGPP 643
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,714,070
Number of Sequences: 27780
Number of extensions: 243006
Number of successful extensions: 1177
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1083
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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