Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_K17
         (904 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   2.2  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   6.7  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   6.7  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   6.7  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   8.8  
AY078401-1|AAL83704.1|   27|Apis mellifera major royal jelly pro...    22   8.8  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 320 PTSGAHMNPAVTLAAALQGRMSP 388
           P SG H + A  LAA L G + P
Sbjct: 515 PPSGHHASSAPLLAATLAGGLCP 537


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 369 SAAASVTAGFMCAPDVGPNAIALPS 295
           +AAAS+T GF+    V  NA+ + S
Sbjct: 36  AAAASLTLGFLVLATVLGNALVILS 60


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 369 SAAASVTAGFMCAPDVGPNAIALPS 295
           +AAAS+T GF+    V  NA+ + S
Sbjct: 36  AAAASLTLGFLVLATVLGNALVILS 60


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 369 SAAASVTAGFMCAPDVGPNAIALPS 295
           +AAAS+T GF+    V  NA+ + S
Sbjct: 36  AAAASLTLGFLVLATVLGNALVILS 60


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 184 LLATAFLGVARRQLRGAVQRE 246
           LL    LG+A + +RG V RE
Sbjct: 5   LLLMVCLGIACQNIRGGVVRE 25


>AY078401-1|AAL83704.1|   27|Apis mellifera major royal jelly
           protein MRJP4 protein.
          Length = 27

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 184 LLATAFLGVARRQLRGAVQRE 246
           LL    LG+A + +RG V RE
Sbjct: 5   LLLMVCLGIACQNIRGGVVRE 25


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,775
Number of Sequences: 438
Number of extensions: 3052
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29267238
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)