Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_K16
(853 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical p... 38 0.007
U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z81573-3|CAB04624.3| 398|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 25 5.9
U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog (hedg... 23 6.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 7.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 7.3
U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein. 28 7.3
AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior phar... 28 7.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 7.3
U97002-11|AAY86259.1| 121|Caenorhabditis elegans Hypothetical p... 28 9.7
AF016450-10|AAB65990.1| 166|Caenorhabditis elegans Hypothetical... 28 9.7
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 23 9.9
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 23 10.0
>U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical
protein C25E10.10 protein.
Length = 169
Score = 38.3 bits (85), Expect = 0.007
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +2
Query: 152 PTRKCP-KGEHSVLYCPQMAEPDC--ENPEVHDFVDHVGPCDVPQCFCDRPNVRNTKTGK 322
P RK +G+ + C EP C ENPE D V C C C + VR++ TGK
Sbjct: 71 PIRKPECEGDEELKACGSACEPTCDNENPEC-DLV-----CMTNVCQCKKGLVRDSATGK 124
Query: 323 CVPESEC 343
CV +++C
Sbjct: 125 CVEKNKC 131
>U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical
protein C53B7.2 protein.
Length = 195
Score = 33.5 bits (73), Expect = 0.20
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 194 CPQMAEPDCENPEVHDFVDHVGPCDVPQCFCDRPNVRNTKTGKCVPESEC 343
C QM P CE+P VD C P C C P + + +C+P + C
Sbjct: 38 CTQMCPPTCESPNPQCRVD----CTRPSCTC-LPGHVYSNSRQCIPANSC 82
>Z81573-3|CAB04624.3| 398|Caenorhabditis elegans Hypothetical
protein M02G9.2 protein.
Length = 398
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +2
Query: 164 CPKGEHSVLYCPQMAEPDCENPEVHDFVDHVGPCDVPQCFCDRPNVRNTKTGKCVPESEC 343
C GE C M P+ ++ + P P+C C NVRN TG +P
Sbjct: 30 CTPGEAPKCGCQVMPTPEIGGGQM---ICTCSPPVPPKCVCTEGNVRNIITGPSLPALFK 86
Query: 344 **NCVN 361
NCV+
Sbjct: 87 PYNCVS 92
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 25.0 bits (52), Expect(2) = 5.9
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +3
Query: 762 PPPPPPXXXXXFFFXXXXP 818
PPPPPP F F P
Sbjct: 576 PPPPPPPPPPSFMFNGKVP 594
Score = 21.8 bits (44), Expect(2) = 5.9
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +3
Query: 714 PXPGGXXXXXFSPXXXPPPPPP 779
P PG +P PPPPPP
Sbjct: 524 PMPGMAPLSTGAPT--PPPPPP 543
>U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 8 protein.
Length = 373
Score = 23.4 bits (48), Expect(2) = 6.5
Identities = 10/20 (50%), Positives = 10/20 (50%), Gaps = 1/20 (5%)
Frame = +1
Query: 724 GXXXXXFFP-PXXXPPPPPP 780
G F P P PPPPPP
Sbjct: 218 GGNNGFFVPVPVVIPPPPPP 237
Score = 23.4 bits (48), Expect(2) = 6.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 763 PPPPPPG 783
PPPPPPG
Sbjct: 234 PPPPPPG 240
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 712 PPXRGXXXXXFFPPXXXPPPPPPGXXXXFFFXXXXPXXP 828
PP G PP PPPPPP F P P
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 712 PPXRGXXXXXFFPPXXXPPPPPPGXXXXFFFXXXXPXXP 828
PP G PP PPPPPP F P P
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein.
Length = 515
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = +2
Query: 179 HSVLYCPQ-MAEPDCENPEVHDFVDHVGPCDVP-QCFCDRPNVRNTKTGKCVPESEC-** 349
H V C + DC NP + G C P QC C T+ +C+P + C
Sbjct: 158 HGVRRCSAGWSGEDCSNPICAGGCSNRGRCVAPNQCSC-ADGFNGTRCEQCLPRAGCVNG 216
Query: 350 NCVN 361
+CVN
Sbjct: 217 DCVN 220
>AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior pharynx
in excess protein1 protein.
Length = 515
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = +2
Query: 179 HSVLYCPQ-MAEPDCENPEVHDFVDHVGPCDVP-QCFCDRPNVRNTKTGKCVPESEC-** 349
H V C + DC NP + G C P QC C T+ +C+P + C
Sbjct: 158 HGVRRCSAGWSGEDCSNPICAGGCSNRGRCVAPNQCSC-ADGFNGTRCEQCLPRAGCVNG 216
Query: 350 NCVN 361
+CVN
Sbjct: 217 DCVN 220
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 712 PPXRGXXXXXFFPPXXXPPPPPPGXXXXFFFXXXXPXXP 828
PP G PP PPPPPP F P P
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
>U97002-11|AAY86259.1| 121|Caenorhabditis elegans Hypothetical
protein K09H11.11 protein.
Length = 121
Score = 27.9 bits (59), Expect = 9.7
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 748 PPXXXPPPPPPG 783
PP PPPPPPG
Sbjct: 8 PPGQQPPPPPPG 19
>AF016450-10|AAB65990.1| 166|Caenorhabditis elegans Hypothetical
protein B0238.12 protein.
Length = 166
Score = 27.9 bits (59), Expect = 9.7
Identities = 20/68 (29%), Positives = 24/68 (35%)
Frame = +2
Query: 140 GQHFPTRKCPKGEHSVLYCPQMAEPDCENPEVHDFVDHVGPCDVPQCFCDRPNVRNTKTG 319
GQ P C C EP C NP C C C VRN T
Sbjct: 32 GQRLP---CRGRNEEYKTCGTACEPSCTNPNPMC----TKQCINNVCQCRSGYVRNEITR 84
Query: 320 KCVPESEC 343
+CV +++C
Sbjct: 85 QCVRQAQC 92
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 23.4 bits (48), Expect(2) = 9.9
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 763 PPPPPPG 783
PPPPPPG
Sbjct: 811 PPPPPPG 817
Score = 22.6 bits (46), Expect(2) = 9.9
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 748 PPXXXPPPPP 777
PP PPPPP
Sbjct: 765 PPPPPPPPPP 774
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 23.4 bits (48), Expect(2) = 10.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 763 PPPPPPG 783
PPPPPPG
Sbjct: 811 PPPPPPG 817
Score = 22.6 bits (46), Expect(2) = 10.0
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 751 PXXXPPPPPP 780
P PPPPPP
Sbjct: 765 PPPPPPPPPP 774
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,223,356
Number of Sequences: 27780
Number of extensions: 318679
Number of successful extensions: 2822
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2198
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -