Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_K15
(910 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.018
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 0.092
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.52
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.91
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.6
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 2.7
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 2.8
SPAC23D3.10c |eng2||endo-1,3-beta-glucanase Eng2|Schizosaccharom... 26 6.4
SPAC8C9.17c |spc34||DASH complex subunit Spc34|Schizosaccharomyc... 26 6.4
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 26 6.4
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.7 bits (76), Expect = 0.018
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +3
Query: 723 PPXPXXXXXXXXXXPPPPPXXPXXPLXXXPXPPPXPP 833
PP P P P P P P+ P PPP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 33.5 bits (73), Expect = 0.042
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 726 PXPXXXXXXXXXXPPPPPXXPXXPLXXXPXPPPXPP 833
P P PPPPP P P PPP PP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 767 PPPPXXPPXSXFXXPXPXPXPXXPXPPXXXXXXXXXPXXPPXG 895
PPPP PP P P P P PP P PP G
Sbjct: 732 PPPP--PPAVIVPTPAPAP---IPVPPPAPIMGGPPPPPPPPG 769
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Frame = +3
Query: 567 PXXXFXPPPHXXP-PKXPPXXXXXXPPPPXPXP 662
P P P P P PP PPPP P P
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 28.3 bits (60), Expect = 1.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 603 PPKXPPXXXXXXPPPPXPXP 662
PP PP PPPP P P
Sbjct: 763 PPPPPPGVAGAGPPPPPPPP 782
Score = 27.1 bits (57), Expect = 3.7
Identities = 15/50 (30%), Positives = 16/50 (32%), Gaps = 2/50 (4%)
Frame = +2
Query: 767 PPPPXX--PPXSXFXXPXPXPXPXXPXPPXXXXXXXXXPXXPPXGPXXXP 910
PPPP P + P P P P PP PP P P
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 585 PPPHXXPPKXPPXXXXXXPPPPXPXP 662
PPP PP P PPPP P P
Sbjct: 761 PPP---PPPPPGVAGAGPPPPPPPPP 783
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 767 PPPPXXPPXSXFXXPXPXPXPXXPXPP 847
PPPP P P P P P PP
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.6 bits (56), Expect(2) = 0.092
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 768 PPPPXXPXXPLXXXPXPPPXPP 833
PPPP P P PPP P
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLP 1736
Score = 24.6 bits (51), Expect(2) = 2.6
Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 3/30 (10%)
Frame = +3
Query: 765 PPPPPXXPXXPLXXXP---XPPPXPPXXXP 845
PPPPP P P PP PP P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 24.2 bits (50), Expect(2) = 0.092
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = +3
Query: 588 PPHXXPPKXPPXXXXXXPPPPXP 656
PP P PP PPP P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAP 1721
Score = 21.0 bits (42), Expect(2) = 2.6
Identities = 9/28 (32%), Positives = 9/28 (32%)
Frame = +3
Query: 567 PXXXFXPPPHXXPPKXPPXXXXXXPPPP 650
P PP PP PPPP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPP 1710
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.9 bits (64), Expect = 0.52
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 765 PPPPPXXPXXPLXXXPXPPPXP 830
PPPPP P P PPP P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 29.5 bits (63), Expect = 0.69
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 585 PPPHXXPPKXPPXXXXXXPPPPXPXP 662
PP + PP PP PPP P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.1 bits (62), Expect = 0.91
Identities = 17/64 (26%), Positives = 17/64 (26%), Gaps = 1/64 (1%)
Frame = +2
Query: 722 PPXAXXXXFXPXXXXPPPPXXPPXSXFXXPXPXPXPXX-PXPPXXXXXXXXXPXXPPXGP 898
PP P PP PP P P P P P P PP P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 899 XXXP 910
P
Sbjct: 475 APPP 478
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/49 (28%), Positives = 14/49 (28%)
Frame = +2
Query: 752 PXXXXPPPPXXPPXSXFXXPXPXPXPXXPXPPXXXXXXXXXPXXPPXGP 898
P P PP PP S P P P P PP P
Sbjct: 246 PSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPP 294
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.3 bits (60), Expect = 1.6
Identities = 22/94 (23%), Positives = 23/94 (24%), Gaps = 1/94 (1%)
Frame = +3
Query: 567 PXXXFXPPPHXXPPKXPPXXXXXXPPPPXPXPXXXXXXXXXTXXXXFFFFXXPPXPXXXX 746
P PP P PP PP P P + P
Sbjct: 1124 PKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPK 1183
Query: 747 XXXXXXP-PPPPXXPXXPLXXXPXPPPXPPXXXP 845
P PPP P P PP PP P
Sbjct: 1184 PAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAP 1217
Score = 26.6 bits (56), Expect = 4.9
Identities = 22/87 (25%), Positives = 23/87 (26%)
Frame = +3
Query: 585 PPPHXXPPKXPPXXXXXXPPPPXPXPXXXXXXXXXTXXXXFFFFXXPPXPXXXXXXXXXX 764
PP K PP PP P P T PP P
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTST--------PPVPKSSSGAPSAP 1063
Query: 765 PPPPPXXPXXPLXXXPXPPPXPPXXXP 845
PP P P + P P PP P
Sbjct: 1064 PPVPA--PSSEIPSIPAPSGAPPVPAP 1088
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.1 bits (57), Expect = 3.7
Identities = 24/93 (25%), Positives = 26/93 (27%)
Frame = +3
Query: 567 PXXXFXPPPHXXPPKXPPXXXXXXPPPPXPXPXXXXXXXXXTXXXXFFFFXXPPXPXXXX 746
P F PP P P PPPP P P ++ P
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNP-PPPPPPPPAVEDQAADANEPDDYYSSGRAVSP---- 221
Query: 747 XXXXXXPPPPPXXPXXPLXXXPXPPPXPPXXXP 845
PP PL P PPP PP P
Sbjct: 222 ----EIPPTYTPKQADPL---PAPPPPPPPTLP 247
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +2
Query: 590 PPXKXPKKXPXXXKXXPPPPXXXPP 664
PP PK+ PPPP PP
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPP 248
Score = 23.8 bits (49), Expect(2) = 2.7
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = +2
Query: 713 FXXPPXAXXXXFXPXXXXPPPPXXPP 790
F P A P PPPP PP
Sbjct: 171 FQPPSAAAPATSLPSDYNPPPPPPPP 196
Score = 21.8 bits (44), Expect(2) = 2.7
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +2
Query: 776 PXXPPXSXFXXPXPXPXPXXPXPP 847
P PP P P P P PP
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPP 244
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/37 (32%), Positives = 12/37 (32%)
Frame = +3
Query: 723 PPXPXXXXXXXXXXPPPPPXXPXXPLXXXPXPPPXPP 833
PP P PP P P P P P PP
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPP 166
Score = 26.2 bits (55), Expect = 6.4
Identities = 15/46 (32%), Positives = 15/46 (32%), Gaps = 9/46 (19%)
Frame = +3
Query: 723 PPXPXXXXXXXXXXPPP---------PPXXPXXPLXXXPXPPPXPP 833
PP P PPP PP P P P PP PP
Sbjct: 158 PPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/55 (25%), Positives = 14/55 (25%)
Frame = +3
Query: 723 PPXPXXXXXXXXXXPPPPPXXPXXPLXXXPXPPPXPPXXXPXXXXXXXXXXPXXP 887
PP P PP P P P P P P P P P
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
>SPAC23D3.10c |eng2||endo-1,3-beta-glucanase
Eng2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 706
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Frame = -3
Query: 275 HCGTSHGPTWS---TKSWTSGFSQSGSAI 198
+ GT H P+WS + +W +G S G AI
Sbjct: 45 YIGTRHNPSWSHPYSVTWLNGSSYYGLAI 73
>SPAC8C9.17c |spc34||DASH complex subunit Spc34|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 164
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1
Query: 178 NVHLSGIFSLENVAR*RNRQLPQ 110
N+H+SGI +LENV + QL Q
Sbjct: 103 NLHMSGIENLENVLLEQKEQLQQ 125
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = -1
Query: 832 GGXGGGXGXXKXGXXGXXGGGGGXXXXXKXXXXGXGG 722
GG GG G G G GGG G + G G
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARG 55
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,591,113
Number of Sequences: 5004
Number of extensions: 49866
Number of successful extensions: 316
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 230
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 460503700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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