Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_K13
(868 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M96954-1|AAA36384.1| 375|Homo sapiens nucleolysin TIAR protein. 100 1e-20
D64015-1|BAA21559.1| 265|Homo sapiens T-cluster binding protein... 100 1e-20
AY633610-1|AAV33303.1| 374|Homo sapiens aging-associated gene 7... 100 1e-20
BC015944-1|AAH15944.1| 214|Homo sapiens TIA1 protein protein. 84 7e-16
AC016700-3|AAX93193.1| 386|Homo sapiens unknown protein. 84 7e-16
AB209211-1|BAD92448.1| 464|Homo sapiens TIA1 protein variant pr... 84 7e-16
M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein. 45 4e-04
U69546-1|AAB09040.1| 490|Homo sapiens RNA-binding protein BRUNO... 44 5e-04
BC036391-1|AAH36391.1| 521|Homo sapiens CUGBP2 protein protein. 44 5e-04
AL157704-2|CAH70230.1| 490|Homo sapiens CUG triplet repeat, RNA... 44 5e-04
AL157704-1|CAH70231.1| 498|Homo sapiens CUG triplet repeat, RNA... 44 5e-04
AL136320-2|CAI20169.1| 490|Homo sapiens CUG triplet repeat, RNA... 44 5e-04
AL136320-1|CAI20168.1| 498|Homo sapiens CUG triplet repeat, RNA... 44 5e-04
AF432906-1|AAL27627.1| 488|Homo sapiens neuroblastoma apoptosis... 44 5e-04
AF295068-3|AAK72223.1| 484|Homo sapiens neuroplastoma apoptosis... 44 5e-04
AF295068-2|AAK92699.1| 490|Homo sapiens neuroplastoma apoptosis... 44 5e-04
AF295068-1|AAK72224.1| 509|Homo sapiens neuroplastoma apoptosis... 44 5e-04
AF090694-1|AAD13761.1| 509|Homo sapiens apoptosis-related RNA b... 44 5e-04
AF090693-1|AAD13760.1| 508|Homo sapiens apoptosis-related RNA b... 44 5e-04
AF036956-1|AAD02074.1| 490|Homo sapiens neuroblastoma apoptosis... 44 5e-04
L26405-1|AAA58677.1| 359|Homo sapiens huc protein. 44 7e-04
BC014144-1|AAH14144.1| 367|Homo sapiens ELAVL3 protein protein. 44 7e-04
BC001526-1|AAH01526.1| 328|Homo sapiens musashi homolog 2 (Dros... 44 7e-04
AY036909-1|AAK67714.1| 360|Homo sapiens HUC protein. 44 7e-04
AY034002-1|AAK57545.1| 318|Homo sapiens Hu antigen C long protein. 44 7e-04
AK093888-1|BAC04244.1| 251|Homo sapiens protein ( Homo sapiens ... 44 7e-04
S63912-1|AAB27595.1| 269|Homo sapiens FBRNP protein. 44 0.001
U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein. 43 0.001
D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear rib... 43 0.001
D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear rib... 43 0.001
D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear rib... 43 0.001
D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear rib... 43 0.001
D26158-1|BAA21838.1| 350|Homo sapiens PLE21 protein protein. 43 0.001
BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein. 43 0.001
BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear r... 43 0.001
BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear r... 43 0.001
BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear r... 43 0.001
BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear r... 43 0.001
AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear r... 43 0.001
AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear r... 43 0.001
AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear r... 43 0.001
AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear r... 43 0.001
AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear r... 43 0.001
AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein. 43 0.001
AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein. 43 0.001
M62843-1|AAA58396.1| 380|Homo sapiens brain protein protein. 43 0.002
BC036071-1|AAH36071.1| 366|Homo sapiens ELAVL4 protein protein. 43 0.002
AY033998-1|AAK57541.1| 380|Homo sapiens HUDPRO1 protein. 43 0.002
AY033997-1|AAK57540.1| 366|Homo sapiens HUD1 protein. 43 0.002
AY033996-1|AAK57539.1| 383|Homo sapiens HUD4 protein. 43 0.002
AY033995-1|AAK57538.1| 366|Homo sapiens HUD3 protein. 43 0.002
AL592182-6|CAI15792.1| 385|Homo sapiens ELAV (embryonic lethal,... 43 0.002
AL592182-5|CAI15793.1| 371|Homo sapiens ELAV (embryonic lethal,... 43 0.002
AL592182-4|CAI15791.1| 380|Homo sapiens ELAV (embryonic lethal,... 43 0.002
AL592182-3|CAI15790.1| 366|Homo sapiens ELAV (embryonic lethal,... 43 0.002
AL592182-2|CAI15789.1| 383|Homo sapiens ELAV (embryonic lethal,... 43 0.002
AL592182-1|CAI15788.1| 366|Homo sapiens ELAV (embryonic lethal,... 43 0.002
AL583843-6|CAI14638.1| 385|Homo sapiens ELAV (embryonic lethal,... 43 0.002
AL583843-5|CAI14639.1| 371|Homo sapiens ELAV (embryonic lethal,... 43 0.002
AL583843-4|CAI14637.1| 380|Homo sapiens ELAV (embryonic lethal,... 43 0.002
AL583843-3|CAI14636.1| 366|Homo sapiens ELAV (embryonic lethal,... 43 0.002
AL583843-2|CAI14635.1| 383|Homo sapiens ELAV (embryonic lethal,... 43 0.002
AL583843-1|CAI14634.1| 366|Homo sapiens ELAV (embryonic lethal,... 43 0.002
U29943-1|AAA70417.1| 346|Homo sapiens Hel-N2 protein. 42 0.002
U12431-1|AAA69698.1| 359|Homo sapiens ELAV-like neuronal protei... 42 0.002
L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein prot... 42 0.002
D89678-1|BAA22860.1| 271|Homo sapiens A+U-rich element RNA bind... 42 0.002
D89092-1|BAA24361.1| 301|Homo sapiens hnRNP JKTBP protein. 42 0.002
CR407623-1|CAG28551.1| 420|Homo sapiens HNRPDL protein. 42 0.002
BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b, sub... 42 0.002
BC071944-1|AAH71944.1| 420|Homo sapiens heterogeneous nuclear r... 42 0.002
BC030692-1|AAH30692.1| 346|Homo sapiens ELAVL2 protein protein. 42 0.002
BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b, sub... 42 0.002
BC011714-1|AAH11714.1| 420|Homo sapiens heterogeneous nuclear r... 42 0.002
BC007392-1|AAH07392.2| 415|Homo sapiens HNRPDL protein protein. 42 0.002
BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b, sub... 42 0.002
AY453824-1|AAR17782.1| 298|Homo sapiens CArG binding factor pro... 42 0.002
AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b, sub... 42 0.002
AL591493-1|CAI12553.1| 190|Homo sapiens splicing factor 3b, sub... 42 0.002
AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b, sub... 42 0.002
AL590487-1|CAI12647.1| 190|Homo sapiens splicing factor 3b, sub... 42 0.002
AL161628-4|CAI13378.1| 387|Homo sapiens ELAV (embryonic lethal,... 42 0.002
AL161628-2|CAC22160.1| 359|Homo sapiens ELAV (embryonic lethal,... 42 0.002
AL161628-1|CAI13376.1| 346|Homo sapiens ELAV (embryonic lethal,... 42 0.002
AC124016-2|AAY40914.1| 420|Homo sapiens unknown protein. 42 0.002
AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein. 42 0.002
AB209294-1|BAD92531.1| 367|Homo sapiens ELAV (embryonic lethal,... 42 0.002
AB066484-1|BAB62188.1| 244|Homo sapiens JKTBP1delta6 protein. 42 0.002
AB017019-1|BAA75241.1| 420|Homo sapiens JKTBP2 protein. 42 0.002
AB017018-2|BAA75240.1| 301|Homo sapiens JKTBP1 protein. 42 0.002
AB017018-1|BAA75239.1| 420|Homo sapiens JKTBP2 protein. 42 0.002
AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein. 42 0.002
X03910-1|CAA27544.1| 225|Homo sapiens protein ( Human mRNA for ... 42 0.003
AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b, sub... 42 0.003
M29064-1|AAA60271.1| 353|Homo sapiens SNRPB1 protein. 42 0.004
D28877-1|BAA06031.1| 353|Homo sapiens hnRNP B1 protein protein. 42 0.004
AL662864-2|CAI40931.1| 200|Homo sapiens novel protein similar t... 41 0.005
AL662864-1|CAI40930.1| 200|Homo sapiens novel protein similar t... 41 0.005
U63289-1|AAC50895.1| 482|Homo sapiens CUG-BP/hNab50 protein. 41 0.007
DQ160195-1|AAZ93379.1| 314|Homo sapiens cyclophilin-33B protein. 41 0.007
BC107736-1|AAI07737.1| 301|Homo sapiens peptidylprolyl isomeras... 41 0.007
BC031079-1|AAH31079.1| 483|Homo sapiens CUG triplet repeat, RNA... 41 0.007
BC008451-1|AAH08451.1| 301|Homo sapiens peptidylprolyl isomeras... 41 0.007
BC004898-1|AAH04898.1| 301|Homo sapiens peptidylprolyl isomeras... 41 0.007
AL049824-4|CAI19350.1| 301|Homo sapiens peptidylprolyl isomeras... 41 0.007
AL049824-2|CAI19348.1| 296|Homo sapiens peptidylprolyl isomeras... 41 0.007
AL049824-1|CAI19347.1| 314|Homo sapiens peptidylprolyl isomeras... 41 0.007
AL035404-8|CAI19579.1| 301|Homo sapiens peptidylprolyl isomeras... 41 0.007
AL035404-6|CAI19577.1| 296|Homo sapiens peptidylprolyl isomeras... 41 0.007
AL035404-5|CAI19576.1| 314|Homo sapiens peptidylprolyl isomeras... 41 0.007
AL033527-11|CAI19410.1| 296|Homo sapiens peptidylprolyl isomera... 41 0.007
AL033527-10|CAI19409.1| 314|Homo sapiens peptidylprolyl isomera... 41 0.007
AJ007988-1|CAC20566.1| 486|Homo sapiens deadenylation factor CU... 41 0.007
AF267534-1|AAF78956.1| 483|Homo sapiens CUG-binding protein A i... 41 0.007
AF267533-1|AAF78955.1| 486|Homo sapiens CUG-binding protein LYL... 41 0.007
AF248648-1|AAF86230.1| 486|Homo sapiens RNA-binding protein BRU... 41 0.007
AF104013-1|AAD19907.1| 296|Homo sapiens peptidyl-prolyl cis-tra... 41 0.007
AF104012-1|AAD19906.1| 301|Homo sapiens peptidyl-prolyl cis-tra... 41 0.007
AF042386-1|AAC00007.1| 296|Homo sapiens cyclophilin-33B protein. 41 0.007
AF042385-1|AAC00006.1| 301|Homo sapiens cyclophilin-33A protein. 41 0.007
L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein. 40 0.009
L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein. 40 0.009
BX537770-1|CAD97833.1| 373|Homo sapiens hypothetical protein pr... 40 0.009
BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif prote... 40 0.009
BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein. 40 0.009
AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif prote... 40 0.009
AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif prote... 40 0.009
Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding pro... 40 0.012
Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for ... 40 0.012
U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein p... 40 0.012
BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein... 40 0.012
BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein... 40 0.012
BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein. 40 0.012
AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open read... 40 0.012
AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open read... 40 0.012
AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open read... 40 0.012
AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open read... 40 0.012
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 40 0.016
BC105582-1|AAI05583.1| 173|Homo sapiens RBMX2 protein protein. 39 0.021
BC033750-1|AAH33750.1| 322|Homo sapiens RNA binding motif prote... 39 0.021
BC003676-1|AAH03676.1| 163|Homo sapiens Unknown (protein for IM... 39 0.021
AL050405-1|CAB43745.1| 322|Homo sapiens hypothetical protein pr... 39 0.021
AL035423-8|CAI42444.1| 322|Homo sapiens RNA binding motif prote... 39 0.021
AF151837-1|AAD34074.1| 351|Homo sapiens CGI-79 protein protein. 39 0.021
X79536-1|CAA56072.1| 320|Homo sapiens hnRNPcore protein A1 prot... 39 0.027
X12671-1|CAA31191.1| 320|Homo sapiens hnrnp a1 protein protein. 39 0.027
X06747-1|CAA29922.1| 320|Homo sapiens protein ( Human hnRNP cor... 39 0.027
BC121133-1|AAI21134.1| 320|Homo sapiens heterogeneous nuclear r... 39 0.027
BC108266-1|AAI08267.1| 320|Homo sapiens heterogeneous nuclear r... 39 0.027
BC103707-1|AAI03708.1| 267|Homo sapiens HNRPA1 protein protein. 39 0.027
BC074502-1|AAH74502.1| 320|Homo sapiens heterogeneous nuclear r... 39 0.027
BC073162-1|AAH73162.1| 320|Homo sapiens heterogeneous nuclear r... 39 0.027
BC071945-1|AAH71945.1| 320|Homo sapiens heterogeneous nuclear r... 39 0.027
BC070315-1|AAH70315.1| 320|Homo sapiens HNRPA1 protein protein. 39 0.027
BC052296-1|AAH52296.1| 320|Homo sapiens heterogeneous nuclear r... 39 0.027
BC041956-1|AAH41956.1| 243|Homo sapiens LOC645974 protein protein. 39 0.027
BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear r... 39 0.027
BC033714-1|AAH33714.1| 320|Homo sapiens heterogeneous nuclear r... 39 0.027
BC012158-1|AAH12158.1| 320|Homo sapiens heterogeneous nuclear r... 39 0.027
BC009600-1|AAH09600.1| 320|Homo sapiens heterogeneous nuclear r... 39 0.027
BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear r... 39 0.027
BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear r... 39 0.027
BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear r... 39 0.027
BC002355-1|AAH02355.1| 320|Homo sapiens heterogeneous nuclear r... 39 0.027
BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear r... 39 0.027
AL137058-3|CAI16736.1| 320|Homo sapiens protein ( Human DNA seq... 39 0.027
AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear r... 39 0.027
AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens ... 39 0.027
U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein. 38 0.036
M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein pr... 38 0.036
BC066549-1|AAH66549.1| 474|Homo sapiens RNA binding motif prote... 38 0.036
BC037837-1|AAH37837.2| 248|Homo sapiens Unknown (protein for MG... 38 0.036
BC024208-1|AAH24208.1| 423|Homo sapiens RNA binding motif prote... 38 0.036
BC002566-1|AAH02566.1| 424|Homo sapiens RNA binding motif prote... 38 0.036
AK001344-1|BAA91638.1| 406|Homo sapiens protein ( Homo sapiens ... 38 0.036
AF526533-1|AAM88417.1| 328|Homo sapiens putative RNA binding pr... 38 0.036
AF275678-1|AAG24388.1| 418|Homo sapiens PP239 protein protein. 38 0.036
AB036991-1|BAC16207.1| 476|Homo sapiens developmentally regulat... 38 0.036
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 38 0.047
U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein p... 38 0.047
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 38 0.047
BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal,... 38 0.047
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 38 0.047
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 38 0.047
BC070262-1|AAH70262.1| 266|Homo sapiens RNA binding motif prote... 38 0.047
BC034381-1|AAH34381.1| 266|Homo sapiens RNA binding motif prote... 38 0.047
BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal,... 38 0.047
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 38 0.047
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 38 0.047
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 38 0.047
AL450998-14|CAH70862.1| 296|Homo sapiens SMART/HDAC1 associated... 38 0.047
AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated... 38 0.047
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 38 0.047
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 38 0.047
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 38 0.047
AL096858-1|CAB51072.1| 3261|Homo sapiens hypothetical protein pr... 38 0.047
AL034555-6|CAI19528.1| 296|Homo sapiens SMART/HDAC1 associated ... 38 0.047
AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated ... 38 0.047
AK002015-1|BAA92036.1| 267|Homo sapiens protein ( Homo sapiens ... 38 0.047
AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor transc... 38 0.047
AF156098-1|AAD39257.1| 266|Homo sapiens RNA binding motif prote... 38 0.047
AB210019-1|BAE06101.1| 544|Homo sapiens CUGBP1 variant protein ... 38 0.047
AB209753-1|BAD92990.1| 155|Homo sapiens Hypothetical protein FL... 38 0.047
AF087905-1|AAP97203.1| 425|Homo sapiens splicing factor SF2 pro... 38 0.063
DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein. 37 0.083
BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein... 37 0.083
BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein... 37 0.083
BC031682-1|AAH31682.1| 450|Homo sapiens RBM42 protein protein. 37 0.083
BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein... 37 0.083
BC004204-1|AAH04204.1| 480|Homo sapiens hypothetical protein MG... 37 0.083
BC002868-1|AAH02868.1| 451|Homo sapiens MGC10433 protein protein. 37 0.083
AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein... 37 0.083
AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein... 37 0.083
AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein pr... 37 0.083
AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif prote... 37 0.083
AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein... 37 0.083
AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific poly(A)... 37 0.083
AC002115-1|AAB57629.1| 339|Homo sapiens F25451_2 protein. 37 0.083
U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1 pr... 37 0.11
CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein. 37 0.11
BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif prote... 37 0.11
BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein. 37 0.11
BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein. 37 0.11
BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein. 37 0.11
BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding protein-in... 37 0.11
AL049824-3|CAI19349.1| 171|Homo sapiens peptidylprolyl isomeras... 37 0.11
AL035404-7|CAI19578.1| 171|Homo sapiens peptidylprolyl isomeras... 37 0.11
AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens ... 37 0.11
AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repress... 37 0.11
AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing... 37 0.11
AF114818-1|AAF23589.1| 559|Homo sapiens Ro ribonucleoprotein-bi... 37 0.11
U09123-1|AAB60650.1| 341|Homo sapiens hnRNP protein A2 protein. 36 0.14
M29065-1|AAA36574.1| 341|Homo sapiens protein ( Human hnRNP A2 ... 36 0.14
D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein. 36 0.14
D28877-2|BAA06032.1| 341|Homo sapiens hnRNP A2 protein protein. 36 0.14
BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA bind... 36 0.14
BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA bind... 36 0.14
BC000506-1|AAH00506.3| 249|Homo sapiens HNRPA2B1 protein protein. 36 0.14
BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA bind... 36 0.14
AK128423-1|BAC87434.1| 135|Homo sapiens protein ( Homo sapiens ... 36 0.14
AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RN... 36 0.14
AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein. 36 0.14
CR457257-1|CAG33538.1| 423|Homo sapiens RNPC4 protein. 36 0.19
U96074-1|AAC78728.1| 320|Homo sapiens translation initiation fa... 36 0.25
CR457134-1|CAG33415.1| 320|Homo sapiens EIF3S4 protein. 36 0.25
BT006889-1|AAP35535.1| 320|Homo sapiens eukaryotic translation ... 36 0.25
BC008469-1|AAH08469.1| 320|Homo sapiens eukaryotic translation ... 36 0.25
BC006474-1|AAH06474.1| 1027|Homo sapiens Unknown (protein for IM... 36 0.25
BC000733-1|AAH00733.1| 320|Homo sapiens eukaryotic translation ... 36 0.25
AL845289-4|CAI12301.1| 129|Homo sapiens poly(A) binding protein... 36 0.25
AL365277-5|CAI16415.1| 129|Homo sapiens poly(A) binding protein... 36 0.25
AF094850-1|AAG15419.1| 320|Homo sapiens eukaryotic translation ... 36 0.25
AF092453-1|AAG15396.1| 320|Homo sapiens eukaryotic translation ... 36 0.25
AF020833-1|AAB71866.1| 320|Homo sapiens eukaryotic translation ... 36 0.25
AB002330-1|BAA20790.1| 1028|Homo sapiens KIAA0332 protein. 36 0.25
BC000680-1|AAH00680.1| 287|Homo sapiens tRNA selenocysteine ass... 35 0.33
AL513497-3|CAI22288.1| 287|Homo sapiens tRNA selenocysteine ass... 35 0.33
AK000510-1|BAA91217.1| 287|Homo sapiens protein ( Homo sapiens ... 35 0.33
U28686-1|AAB17212.1| 157|Homo sapiens RNPL protein. 35 0.44
BC006825-1|AAH06825.1| 157|Homo sapiens RNA binding motif (RNP1... 35 0.44
U23803-1|AAA65094.1| 305|Homo sapiens heterogeneous ribonucleop... 34 0.58
CR456986-1|CAG33267.1| 305|Homo sapiens HNRPA0 protein. 34 0.58
BC030249-1|AAH30249.1| 305|Homo sapiens heterogeneous nuclear r... 34 0.58
BC028976-1|AAH28976.1| 305|Homo sapiens heterogeneous nuclear r... 34 0.58
BC019271-1|AAH19271.1| 305|Homo sapiens heterogeneous nuclear r... 34 0.58
BC018949-1|AAH18949.1| 305|Homo sapiens heterogeneous nuclear r... 34 0.58
BC012980-1|AAH12980.1| 305|Homo sapiens heterogeneous nuclear r... 34 0.58
BC011972-1|AAH11972.1| 305|Homo sapiens heterogeneous nuclear r... 34 0.58
BC009284-1|AAH09284.1| 305|Homo sapiens heterogeneous nuclear r... 34 0.58
BC007271-1|AAH07271.1| 305|Homo sapiens heterogeneous nuclear r... 34 0.58
BC001008-1|AAH01008.1| 305|Homo sapiens heterogeneous nuclear r... 34 0.58
U21663-1|AAB02393.1| 366|Homo sapiens DAZ protein protein. 34 0.77
BC139836-1|AAI39837.1| 563|Homo sapiens RBM15B protein protein. 34 0.77
BC114927-1|AAI14928.1| 613|Homo sapiens DAZ1 protein protein. 34 0.77
BC113006-1|AAI13007.1| 534|Homo sapiens deleted in azoospermia ... 34 0.77
BC113005-1|AAI13006.1| 438|Homo sapiens deleted in azoospermia ... 34 0.77
BC047617-1|AAH47617.1| 390|Homo sapiens deleted in azoospermia ... 34 0.77
BC047480-1|AAH47480.1| 390|Homo sapiens deleted in azoospermia ... 34 0.77
BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein ... 34 0.77
AY678451-1|AAV97647.1| 454|Homo sapiens DAZAP1/MEF2D fusion pro... 34 0.77
AL161628-3|CAI13377.1| 189|Homo sapiens ELAV (embryonic lethal,... 34 0.77
AF414184-1|AAL24502.1| 534|Homo sapiens deleted in azoospermia ... 34 0.77
AF271088-1|AAF91406.1| 501|Homo sapiens deleted in azoospermia ... 34 0.77
AF271087-1|AAF91405.1| 458|Homo sapiens deleted in azoospermia ... 34 0.77
AF248483-1|AAF91332.1| 413|Homo sapiens deleted in azoospermia ... 34 0.77
AF248482-1|AAF91331.1| 331|Homo sapiens deleted in azoospermia ... 34 0.77
AF248481-1|AAF91330.1| 486|Homo sapiens deleted in azoospermia ... 34 0.77
AF248480-1|AAF91329.1| 558|Homo sapiens deleted in azoospermia ... 34 0.77
AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein ... 34 0.77
BC004167-1|AAH04167.2| 484|Homo sapiens bruno-like 4, RNA bindi... 33 1.0
BC001946-1|AAH01946.2| 484|Homo sapiens bruno-like 4, RNA bindi... 33 1.0
M72709-2|AAA35565.1| 248|Homo sapiens protein ( Human alternati... 33 1.3
M72709-1|AAA35564.1| 292|Homo sapiens protein ( Human alternati... 33 1.3
M69040-1|AAA03476.1| 248|Homo sapiens SF2p33 protein. 33 1.3
BC033785-1|AAH33785.1| 201|Homo sapiens SFRS1 protein protein. 33 1.3
BC011731-1|AAH11731.1| 449|Homo sapiens GTPase activating prote... 33 1.3
BC010264-1|AAH10264.1| 248|Homo sapiens splicing factor, argini... 33 1.3
AY547318-1|AAS55633.1| 236|Homo sapiens unknown protein. 33 1.3
AL136305-1|CAC36889.1| 236|Homo sapiens protein ( Human DNA seq... 33 1.3
AK095016-1|BAC04474.1| 211|Homo sapiens protein ( Homo sapiens ... 33 1.3
AK074596-1|BAC11082.1| 484|Homo sapiens protein ( Homo sapiens ... 33 1.3
AF145284-1|AAD51932.1| 482|Homo sapiens RNA-binding protein iso... 33 1.3
AF053535-1|AAC95292.1| 449|Homo sapiens ras-GAP/RNA binding pro... 33 1.3
AB209558-1|BAD92795.1| 233|Homo sapiens splicing factor, argini... 33 1.3
AB062124-1|BAB93456.1| 248|Homo sapiens OK/SW-cl.3 protein. 33 1.3
AB014560-1|BAA31635.2| 490|Homo sapiens KIAA0660 protein protein. 33 1.3
AK056850-1|BAB71295.1| 289|Homo sapiens protein ( Homo sapiens ... 33 1.8
U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein. 32 2.4
BX537536-1|CAD97776.1| 492|Homo sapiens hypothetical protein pr... 32 2.4
BC113691-1|AAI13692.1| 395|Homo sapiens ataxin 2-binding protei... 32 2.4
BC107684-1|AAI07685.1| 387|Homo sapiens PPIL4 protein protein. 32 2.4
BC064960-1|AAH64960.1| 143|Homo sapiens RBM4 protein protein. 32 2.4
BC064134-1|AAH64134.1| 434|Homo sapiens PPIL4 protein protein. 32 2.4
BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif prote... 32 2.4
BC029451-1|AAH29451.1| 425|Homo sapiens RNA binding motif prote... 32 2.4
BC021120-1|AAH21120.1| 177|Homo sapiens RBM4 protein protein. 32 2.4
BC020986-1|AAH20986.1| 492|Homo sapiens peptidylprolyl isomeras... 32 2.4
BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif prote... 32 2.4
AL732292-3|CAM28277.1| 408|Homo sapiens novel protein protein. 32 2.4
AL732292-2|CAI21936.1| 430|Homo sapiens RNA binding motif prote... 32 2.4
AL357619-2|CAI16471.1| 492|Homo sapiens peptidylprolyl isomeras... 32 2.4
AL133418-4|CAM28326.1| 408|Homo sapiens novel protein protein. 32 2.4
AL133418-3|CAI22960.1| 430|Homo sapiens RNA binding motif prote... 32 2.4
AL078581-5|CAI19508.1| 492|Homo sapiens peptidylprolyl isomeras... 32 2.4
AK001027-1|BAA91472.1| 397|Homo sapiens protein ( Homo sapiens ... 32 2.4
AF448859-1|AAP41925.1| 370|Homo sapiens ataxin 2-binding protei... 32 2.4
AF229057-1|AAL71904.1| 418|Homo sapiens hexaribonucleotide bind... 32 2.4
AF109120-3|AAL83407.1| 395|Homo sapiens hexaribonucleotide bind... 32 2.4
AF109120-2|AAL83408.1| 392|Homo sapiens hexaribonucleotide bind... 32 2.4
AF109120-1|AAL83409.1| 418|Homo sapiens hexaribonucleotide bind... 32 2.4
AF109106-1|AAL83406.1| 395|Homo sapiens hexaribonucleotide bind... 32 2.4
AF107203-1|AAF78291.1| 377|Homo sapiens ataxin 2-binding protei... 32 2.4
AF094849-1|AAL83405.1| 392|Homo sapiens hexaribonucleotide bind... 32 2.4
AB208826-1|BAD92063.1| 303|Homo sapiens ataxin 2-binding protei... 32 2.4
X75315-1|CAA53064.1| 230|Homo sapiens SEB4B protein. 32 3.1
X75314-1|CAA53063.1| 229|Homo sapiens SEB4D protein. 32 3.1
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 32 3.1
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 32 3.1
U44799-1|AAA86655.1| 246|Homo sapiens U1-snRNP binding protein ... 32 3.1
U44798-1|AAA86654.1| 246|Homo sapiens U1-snRNP binding protein ... 32 3.1
D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding pro... 32 3.1
BC111955-1|AAI11956.1| 251|Homo sapiens U11/U12 snRNP 35K, isof... 32 3.1
BC093671-1|AAH93671.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 32 3.1
BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein. 32 3.1
BC054034-1|AAH54034.1| 246|Homo sapiens U11/U12 snRNP 35K protein. 32 3.1
BC047678-1|AAH47678.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 32 3.1
BC018711-1|AAH18711.1| 216|Homo sapiens RBM38 protein protein. 32 3.1
BC009622-1|AAH09622.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 32 3.1
BC004145-1|AAH04145.2| 291|Homo sapiens TNRC4 protein protein. 32 3.1
AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat co... 32 3.1
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 32 3.1
AF432218-1|AAL99924.1| 216|Homo sapiens CLL-associated antigen ... 32 3.1
AF051311-1|AAC15705.1| 449|Homo sapiens Ras-GAP SH3 binding pro... 32 3.1
U66726-1|AAB39935.1| 295|Homo sapiens germline specific RNA bin... 31 4.1
U66078-1|AAB63596.1| 295|Homo sapiens DAZLA protein. 31 4.1
U65918-1|AAC50813.1| 295|Homo sapiens RNA binding protein protein. 31 4.1
BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat co... 31 4.1
BC052491-1|AAH52491.1| 464|Homo sapiens trinucleotide repeat co... 31 4.1
BC033838-1|AAH33838.1| 368|Homo sapiens BRUNOL6 protein protein. 31 4.1
BC030835-1|AAH30835.1| 481|Homo sapiens bruno-like 6, RNA bindi... 31 4.1
BC027595-1|AAH27595.1| 295|Homo sapiens deleted in azoospermia-... 31 4.1
BC019319-1|AAH19319.1| 190|Homo sapiens RNA binding motif prote... 31 4.1
BC008942-1|AAH08942.1| 190|Homo sapiens RNA binding motif prote... 31 4.1
AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like f... 31 4.1
AL589765-4|CAI17167.1| 415|Homo sapiens trinucleotide repeat co... 31 4.1
AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat co... 31 4.1
AL162424-7|CAI14706.1| 190|Homo sapiens RNA binding motif prote... 31 4.1
AK131098-1|BAC85148.1| 376|Homo sapiens FLJ00324 protein protein. 31 4.1
AF425606-1|AAL34513.1| 481|Homo sapiens RNA-binding protein CEL... 31 4.1
AF401233-1|AAK95615.1| 481|Homo sapiens BRUNO-like 6 RNA-bindin... 31 4.1
AF329265-1|AAK07475.1| 486|Homo sapiens CUG-BP and ETR-3 like f... 31 4.1
AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like f... 31 4.1
AF186379-1|AAD56250.1| 798|Homo sapiens ligand effect modulator... 31 4.1
AF159714-1|AAD51615.1| 798|Homo sapiens PPAR gamma coactivator-... 31 4.1
AF108205-1|AAF19083.1| 798|Homo sapiens PPAR gamma coactivator-... 31 4.1
AF106698-1|AAF18573.1| 798|Homo sapiens PPAR gamma coactivator-... 31 4.1
AC092834-1|AAY41058.1| 798|Homo sapiens unknown protein. 31 4.1
AB209774-1|BAD93011.1| 510|Homo sapiens bruno-like 4, RNA bindi... 31 4.1
AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat co... 31 4.1
U87279-1|AAD00626.1| 221|Homo sapiens splicing factor SRp30c pr... 31 5.4
U30825-1|AAA93069.1| 221|Homo sapiens SRp30c protein. 31 5.4
BC118568-1|AAI18569.1| 252|Homo sapiens PABPC4 protein protein. 31 5.4
BC106908-1|AAI06909.1| 281|Homo sapiens PABPC4 protein protein. 31 5.4
BC093973-1|AAH93973.1| 221|Homo sapiens splicing factor, argini... 31 5.4
BC093971-1|AAH93971.1| 221|Homo sapiens splicing factor, argini... 31 5.4
AP001660-1|BAA95545.1| 281|Homo sapiens RBM11 protein. 31 5.4
AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protei... 31 5.4
AL021546-5|CAA16498.1| 221|Homo sapiens splicing factor, argini... 31 5.4
AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant ... 31 5.4
BC045711-1|AAH45711.1| 448|Homo sapiens BRUNOL4 protein protein. 31 7.2
BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein. 31 7.2
BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif prote... 31 7.2
BC004945-1|AAH04945.1| 298|Homo sapiens Unknown (protein for IM... 31 7.2
BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein. 31 7.2
BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif prote... 31 7.2
AK126716-1|BAC86656.1| 250|Homo sapiens protein ( Homo sapiens ... 31 7.2
AF248650-1|AAF86232.1| 294|Homo sapiens RNA-binding protein BRU... 31 7.2
AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein. 31 7.2
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 30 9.5
X16850-1|CAA34747.1| 396|Homo sapiens myoblast antigen 24.1D5 p... 30 9.5
EF055888-1|ABK58591.1| 80|Homo sapiens DAZL protein. 30 9.5
BC103507-1|AAI03508.1| 969|Homo sapiens RBM15 protein protein. 30 9.5
BC103493-1|AAI03494.1| 969|Homo sapiens RBM15 protein protein. 30 9.5
BC098140-1|AAH98140.1| 969|Homo sapiens RBM15 protein protein. 30 9.5
BC062316-1|AAH62316.1| 957|Homo sapiens RBM15 protein protein. 30 9.5
BC056876-1|AAH56876.2| 559|Homo sapiens chromosome 13 open read... 30 9.5
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 30 9.5
BC047479-1|AAH47479.1| 959|Homo sapiens RBM15 protein protein. 30 9.5
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 30 9.5
BC025367-1|AAH25367.2| 559|Homo sapiens chromosome 13 open read... 30 9.5
BC006397-1|AAH06397.2| 957|Homo sapiens RBM15 protein protein. 30 9.5
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 30 9.5
AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein... 30 9.5
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 30 9.5
AL355488-1|CAI19077.1| 977|Homo sapiens RNA binding motif prote... 30 9.5
AL138695-5|CAH72712.2| 559|Homo sapiens chromosome 13 open read... 30 9.5
AK022541-1|BAB14088.1| 925|Homo sapiens protein ( Homo sapiens ... 30 9.5
AJ303090-1|CAC38829.1| 1883|Homo sapiens OTT-MAL protein. 30 9.5
AJ303089-1|CAC38828.1| 1905|Homo sapiens OTT-MAL protein. 30 9.5
AJ297259-2|CAC38862.1| 969|Homo sapiens one twenty two protein ... 30 9.5
AJ297259-1|CAC38861.1| 957|Homo sapiens one twenty two protein ... 30 9.5
AF368064-1|AAK54724.1| 957|Homo sapiens putative RNA-binding mo... 30 9.5
AF368063-1|AAK54723.1| 977|Homo sapiens putative RNA-binding mo... 30 9.5
AF368062-1|AAK54722.1| 969|Homo sapiens putative RNA-binding mo... 30 9.5
AF141345-1|AAG49448.1| 213|Homo sapiens LYST-interacting protei... 30 9.5
>M96954-1|AAA36384.1| 375|Homo sapiens nucleolysin TIAR protein.
Length = 375
Score = 99.5 bits (237), Expect = 1e-20
Identities = 47/76 (61%), Positives = 58/76 (76%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN R +L KE+KVNWAT+P +Q K DTSNH H+FVGDLSPEI T ++ AFAPFG+IS+
Sbjct: 68 MNGRKILGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 126
Query: 627 RIVRDPQTLKSTGLCF 674
R+V+D T KS G F
Sbjct: 127 RVVKDMATGKSKGYGF 142
Score = 67.3 bits (157), Expect = 7e-11
Identities = 32/57 (56%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = +2
Query: 251 MGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE-PGNDPYAFLEFTCH 418
M D+ P+TLYVGNL VTEV + LF QIG K CK+I E NDPY F+EF H
Sbjct: 2 MEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEH 58
>D64015-1|BAA21559.1| 265|Homo sapiens T-cluster binding protein
protein.
Length = 265
Score = 99.5 bits (237), Expect = 1e-20
Identities = 47/76 (61%), Positives = 58/76 (76%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN R +L KE+KVNWAT+P +Q K DTSNH H+FVGDLSPEI T ++ AFAPFG+IS+
Sbjct: 29 MNGRKILGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 87
Query: 627 RIVRDPQTLKSTGLCF 674
R+V+D T KS G F
Sbjct: 88 RVVKDMATGKSKGYGF 103
>AY633610-1|AAV33303.1| 374|Homo sapiens aging-associated gene 7
protein protein.
Length = 374
Score = 99.5 bits (237), Expect = 1e-20
Identities = 47/76 (61%), Positives = 58/76 (76%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN R +L KE+KVNWAT+P +Q K DTSNH H+FVGDLSPEI T ++ AFAPFG+IS+
Sbjct: 68 MNGRKILGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 126
Query: 627 RIVRDPQTLKSTGLCF 674
R+V+D T KS G F
Sbjct: 127 RVVKDMATGKSKGYGF 142
Score = 67.3 bits (157), Expect = 7e-11
Identities = 32/57 (56%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = +2
Query: 251 MGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE-PGNDPYAFLEFTCH 418
M D+ P+TLYVGNL VTEV + LF QIG K CK+I E NDPY F+EF H
Sbjct: 2 MEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEH 58
>BC015944-1|AAH15944.1| 214|Homo sapiens TIA1 protein protein.
Length = 214
Score = 83.8 bits (198), Expect = 7e-16
Identities = 43/86 (50%), Positives = 56/86 (65%), Gaps = 10/86 (11%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSN----------HHHIFVGDLSPEIETNILREA 596
MN R ++ KE+KVNWAT+P +Q K +S+ H H+FVGDLSPEI T ++ A
Sbjct: 66 MNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAA 125
Query: 597 FAPFGEISNCRIVRDPQTLKSTGLCF 674
FAPFG IS+ R+V+D T KS G F
Sbjct: 126 FAPFGRISDARVVKDMATGKSKGYGF 151
Score = 64.5 bits (150), Expect = 5e-10
Identities = 30/55 (54%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +2
Query: 257 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE-PGNDPYAFLEFTCH 418
++ PKTLYVGNL VTE + LF QIG K CK+I + GNDPY F+EF H
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEH 56
>AC016700-3|AAX93193.1| 386|Homo sapiens unknown protein.
Length = 386
Score = 83.8 bits (198), Expect = 7e-16
Identities = 43/86 (50%), Positives = 56/86 (65%), Gaps = 10/86 (11%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSN----------HHHIFVGDLSPEIETNILREA 596
MN R ++ KE+KVNWAT+P +Q K +S+ H H+FVGDLSPEI T ++ A
Sbjct: 66 MNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAA 125
Query: 597 FAPFGEISNCRIVRDPQTLKSTGLCF 674
FAPFG IS+ R+V+D T KS G F
Sbjct: 126 FAPFGRISDARVVKDMATGKSKGYGF 151
Score = 64.5 bits (150), Expect = 5e-10
Identities = 30/55 (54%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +2
Query: 257 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE-PGNDPYAFLEFTCH 418
++ PKTLYVGNL VTE + LF QIG K CK+I + GNDPY F+EF H
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEH 56
>AB209211-1|BAD92448.1| 464|Homo sapiens TIA1 protein variant
protein.
Length = 464
Score = 83.8 bits (198), Expect = 7e-16
Identities = 43/86 (50%), Positives = 56/86 (65%), Gaps = 10/86 (11%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSN----------HHHIFVGDLSPEIETNILREA 596
MN R ++ KE+KVNWAT+P +Q K +S+ H H+FVGDLSPEI T ++ A
Sbjct: 104 MNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAA 163
Query: 597 FAPFGEISNCRIVRDPQTLKSTGLCF 674
FAPFG IS+ R+V+D T KS G F
Sbjct: 164 FAPFGRISDARVVKDMATGKSKGYGF 189
Score = 65.3 bits (152), Expect = 3e-10
Identities = 34/59 (57%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = +2
Query: 245 ANMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE-PGNDPYAFLEFTCH 418
A M DE PKTLYVGNL VTE + LF QIG K CK+I + GNDPY F+EF H
Sbjct: 37 AAMEDEM-PKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEH 94
>M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein.
Length = 328
Score = 44.8 bits (101), Expect = 4e-04
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +3
Query: 456 RVVLDKEMKVNWATSPXNQPKTDTSNH--HHIFVGDLSPEIETNILREAFAPFGEISNCR 629
+V+ KE K+N + K + IFVG LSP+ +RE F FGE+ +
Sbjct: 132 KVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIE 191
Query: 630 IVRDPQTLKSTGLCF 674
+ D +T K GLCF
Sbjct: 192 LPMDNKTNKRRGLCF 206
Score = 35.5 bits (78), Expect = 0.25
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+F+G LS + L++ F+ FGE+ +C + DP T +S G F +
Sbjct: 78 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVL 123
>U69546-1|AAB09040.1| 490|Homo sapiens RNA-binding protein BRUNOL3
protein.
Length = 490
Score = 44.4 bits (100), Expect = 5e-04
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +3
Query: 501 PXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
P + K++ +F+G +S + N +R F+PFG+I CRI+R P L S G F
Sbjct: 96 PADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 152
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +3
Query: 483 VNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRD--PQTLK 656
+N A +QP D +FVG + L+E F P+G + ++RD +
Sbjct: 1 MNGALDHSDQPDPDAIK---MFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQ 57
Query: 657 STGLCF 674
S G CF
Sbjct: 58 SKGCCF 63
>BC036391-1|AAH36391.1| 521|Homo sapiens CUGBP2 protein protein.
Length = 521
Score = 44.4 bits (100), Expect = 5e-04
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +3
Query: 501 PXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
P + K++ +F+G +S + N +R F+PFG+I CRI+R P L S G F
Sbjct: 115 PADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 171
Score = 32.3 bits (70), Expect = 2.4
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +3
Query: 480 KVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRD--PQTL 653
K+N A +QP D +FVG + L+E F P+G + ++RD
Sbjct: 19 KMNGALDHSDQPDPDAIK---MFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPP 75
Query: 654 KSTGLCF 674
+S G CF
Sbjct: 76 QSKGCCF 82
>AL157704-2|CAH70230.1| 490|Homo sapiens CUG triplet repeat, RNA
binding protein 2 protein.
Length = 490
Score = 44.4 bits (100), Expect = 5e-04
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +3
Query: 501 PXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
P + K++ +F+G +S + N +R F+PFG+I CRI+R P L S G F
Sbjct: 96 PADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 152
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +3
Query: 483 VNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRD--PQTLK 656
+N A +QP D +FVG + L+E F P+G + ++RD +
Sbjct: 1 MNGALDHSDQPDPDAIK---MFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQ 57
Query: 657 STGLCF 674
S G CF
Sbjct: 58 SKGCCF 63
>AL157704-1|CAH70231.1| 498|Homo sapiens CUG triplet repeat, RNA
binding protein 2 protein.
Length = 498
Score = 44.4 bits (100), Expect = 5e-04
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +3
Query: 501 PXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
P + K++ +F+G +S + N +R F+PFG+I CRI+R P L S G F
Sbjct: 96 PADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 152
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +3
Query: 483 VNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRD--PQTLK 656
+N A +QP D +FVG + L+E F P+G + ++RD +
Sbjct: 1 MNGALDHSDQPDPDAIK---MFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQ 57
Query: 657 STGLCF 674
S G CF
Sbjct: 58 SKGCCF 63
>AL136320-2|CAI20169.1| 490|Homo sapiens CUG triplet repeat, RNA
binding protein 2 protein.
Length = 490
Score = 44.4 bits (100), Expect = 5e-04
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +3
Query: 501 PXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
P + K++ +F+G +S + N +R F+PFG+I CRI+R P L S G F
Sbjct: 96 PADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 152
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +3
Query: 483 VNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRD--PQTLK 656
+N A +QP D +FVG + L+E F P+G + ++RD +
Sbjct: 1 MNGALDHSDQPDPDAIK---MFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQ 57
Query: 657 STGLCF 674
S G CF
Sbjct: 58 SKGCCF 63
>AL136320-1|CAI20168.1| 498|Homo sapiens CUG triplet repeat, RNA
binding protein 2 protein.
Length = 498
Score = 44.4 bits (100), Expect = 5e-04
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +3
Query: 501 PXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
P + K++ +F+G +S + N +R F+PFG+I CRI+R P L S G F
Sbjct: 96 PADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 152
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +3
Query: 483 VNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRD--PQTLK 656
+N A +QP D +FVG + L+E F P+G + ++RD +
Sbjct: 1 MNGALDHSDQPDPDAIK---MFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQ 57
Query: 657 STGLCF 674
S G CF
Sbjct: 58 SKGCCF 63
>AF432906-1|AAL27627.1| 488|Homo sapiens neuroblastoma
apoptosis-related RNA-binding protein isoform 4 protein.
Length = 488
Score = 44.4 bits (100), Expect = 5e-04
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +3
Query: 501 PXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
P + K++ +F+G +S + N +R F+PFG+I CRI+R P L S G F
Sbjct: 96 PADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 152
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +3
Query: 483 VNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRD--PQTLK 656
+N A +QP D +FVG + L+E F P+G + ++RD +
Sbjct: 1 MNGALDHSDQPDPDAIK---MFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQ 57
Query: 657 STGLCF 674
S G CF
Sbjct: 58 SKGCCF 63
>AF295068-3|AAK72223.1| 484|Homo sapiens neuroplastoma
apoptosis-related RNA-binding protein 3 protein.
Length = 484
Score = 44.4 bits (100), Expect = 5e-04
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +3
Query: 501 PXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
P + K++ +F+G +S + N +R F+PFG+I CRI+R P L S G F
Sbjct: 96 PADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 152
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +3
Query: 483 VNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRD--PQTLK 656
+N A +QP D +FVG + L+E F P+G + ++RD +
Sbjct: 1 MNGALDHSDQPDPDAIK---MFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQ 57
Query: 657 STGLCF 674
S G CF
Sbjct: 58 SKGCCF 63
>AF295068-2|AAK92699.1| 490|Homo sapiens neuroplastoma
apoptosis-related RNA-binding protein 1 protein.
Length = 490
Score = 44.4 bits (100), Expect = 5e-04
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +3
Query: 501 PXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
P + K++ +F+G +S + N +R F+PFG+I CRI+R P L S G F
Sbjct: 96 PADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 152
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +3
Query: 483 VNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRD--PQTLK 656
+N A +QP D +FVG + L+E F P+G + ++RD +
Sbjct: 1 MNGALDHSDQPDPDAIK---MFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQ 57
Query: 657 STGLCF 674
S G CF
Sbjct: 58 SKGCCF 63
>AF295068-1|AAK72224.1| 509|Homo sapiens neuroplastoma
apoptosis-related RNA-binding protein 2 protein.
Length = 509
Score = 44.4 bits (100), Expect = 5e-04
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +3
Query: 501 PXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
P + K++ +F+G +S + N +R F+PFG+I CRI+R P L S G F
Sbjct: 115 PADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 171
Score = 32.3 bits (70), Expect = 2.4
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +3
Query: 480 KVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRD--PQTL 653
K+N A +QP D +FVG + L+E F P+G + ++RD
Sbjct: 19 KMNGALDHSDQPDPDAIK---MFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPP 75
Query: 654 KSTGLCF 674
+S G CF
Sbjct: 76 QSKGCCF 82
>AF090694-1|AAD13761.1| 509|Homo sapiens apoptosis-related RNA
binding protein protein.
Length = 509
Score = 44.4 bits (100), Expect = 5e-04
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +3
Query: 501 PXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
P + K++ +F+G +S + N +R F+PFG+I CRI+R P L S G F
Sbjct: 115 PADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 171
Score = 32.3 bits (70), Expect = 2.4
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +3
Query: 480 KVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRD--PQTL 653
K+N A +QP D +FVG + L+E F P+G + ++RD
Sbjct: 19 KMNGALDHSDQPDPDAIK---MFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPP 75
Query: 654 KSTGLCF 674
+S G CF
Sbjct: 76 QSKGCCF 82
>AF090693-1|AAD13760.1| 508|Homo sapiens apoptosis-related RNA
binding protein protein.
Length = 508
Score = 44.4 bits (100), Expect = 5e-04
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +3
Query: 501 PXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
P + K++ +F+G +S + N +R F+PFG+I CRI+R P L S G F
Sbjct: 120 PADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 176
Score = 32.3 bits (70), Expect = 2.4
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +3
Query: 480 KVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRD--PQTL 653
K+N A +QP D +FVG + L+E F P+G + ++RD
Sbjct: 24 KMNGALDHSDQPDPDAIK---MFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPP 80
Query: 654 KSTGLCF 674
+S G CF
Sbjct: 81 QSKGCCF 87
>AF036956-1|AAD02074.1| 490|Homo sapiens neuroblastoma
apoptosis-related RNA binding protein protein.
Length = 490
Score = 44.4 bits (100), Expect = 5e-04
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +3
Query: 501 PXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
P + K++ +F+G +S + N +R F+PFG+I CRI+R P L S G F
Sbjct: 96 PADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 152
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +3
Query: 483 VNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRD--PQTLK 656
+N A +QP D +FVG + L+E F P+G + ++RD +
Sbjct: 1 MNGALDHSDQPDPDAIK---MFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQ 57
Query: 657 STGLCF 674
S G CF
Sbjct: 58 SKGCCF 63
>L26405-1|AAA58677.1| 359|Homo sapiens huc protein.
Length = 359
Score = 44.0 bits (99), Expect = 7e-04
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFV +LSPE + ++L + F PFG ++N +++RD T K G F
Sbjct: 278 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGF 321
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +2
Query: 248 NMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEF 409
N + L V L ++T+ +LFG IGD++ CK++R+ G D Y F+ +
Sbjct: 31 NGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGRDLGYGFVNY 87
Score = 30.3 bits (65), Expect = 9.5
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
++V NL P E L LFG G V K+IR+
Sbjct: 278 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRD 310
>BC014144-1|AAH14144.1| 367|Homo sapiens ELAVL3 protein protein.
Length = 367
Score = 44.0 bits (99), Expect = 7e-04
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFV +LSPE + ++L + F PFG ++N +++RD T K G F
Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGF 329
Score = 32.7 bits (71), Expect = 1.8
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 248 NMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
N + L V L ++T+ +LFG IGD++ CK++R+
Sbjct: 31 NGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRD 73
Score = 30.3 bits (65), Expect = 9.5
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
++V NL P E L LFG G V K+IR+
Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRD 318
>BC001526-1|AAH01526.1| 328|Homo sapiens musashi homolog 2
(Drosophila) protein.
Length = 328
Score = 44.0 bits (99), Expect = 7e-04
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+F+G LS + + LR+ F+ FGEI C ++RDP T +S G F
Sbjct: 23 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGF 66
>AY036909-1|AAK67714.1| 360|Homo sapiens HUC protein.
Length = 360
Score = 44.0 bits (99), Expect = 7e-04
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFV +LSPE + ++L + F PFG ++N +++RD T K G F
Sbjct: 279 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGF 322
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +2
Query: 248 NMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEF 409
N + L V L ++T+ +LFG IGD++ CK++R+ G D Y F+ +
Sbjct: 31 NGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGRDLGYGFVNY 87
Score = 30.3 bits (65), Expect = 9.5
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
++V NL P E L LFG G V K+IR+
Sbjct: 279 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRD 311
>AY034002-1|AAK57545.1| 318|Homo sapiens Hu antigen C long protein.
Length = 318
Score = 44.0 bits (99), Expect = 7e-04
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFV +LSPE + ++L + F PFG ++N +++RD T K G F
Sbjct: 237 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGF 280
Score = 30.3 bits (65), Expect = 9.5
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
++V NL P E L LFG G V K+IR+
Sbjct: 237 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRD 269
>AK093888-1|BAC04244.1| 251|Homo sapiens protein ( Homo sapiens
cDNA FLJ36569 fis, clone TRACH2010824, highly similar to
Ribonucleoprotein. ).
Length = 251
Score = 44.0 bits (99), Expect = 7e-04
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+F+G LS + + LR+ F+ FGEI C ++RDP T +S G F
Sbjct: 19 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGF 62
>S63912-1|AAB27595.1| 269|Homo sapiens FBRNP protein.
Length = 269
Score = 43.6 bits (98), Expect = 0.001
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+F+G LS E + LRE F +G +++C ++RDPQT +S G F
Sbjct: 37 LFIGGLSFETTDDSLREHFEKWGTLTDCLVMRDPQTKRSRGFGF 80
>U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein.
Length = 286
Score = 43.2 bits (97), Expect = 0.001
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 456 RVVLDKEMKVNWATSPXNQPKTDTSNH--HHIFVGDLSPEIETNILREAFAPFGEISNCR 629
+V+ KE K+N + K + IFVG LSP+ +RE F FGE+ +
Sbjct: 132 KVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIE 191
Query: 630 IVRDPQTLKSTGLCF 674
+ D +T K G CF
Sbjct: 192 LPMDNKTNKRRGFCF 206
Score = 35.5 bits (78), Expect = 0.25
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+F+G LS + L++ F+ FGE+ +C + DP T +S G F +
Sbjct: 78 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVL 123
>D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 355
Score = 43.2 bits (97), Expect = 0.001
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 456 RVVLDKEMKVNWATSPXNQPKTDTSNH--HHIFVGDLSPEIETNILREAFAPFGEISNCR 629
+V+ KE K+N + K + IFVG LSP+ +RE F FGE+ +
Sbjct: 153 KVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIE 212
Query: 630 IVRDPQTLKSTGLCF 674
+ D +T K G CF
Sbjct: 213 LPMDNKTNKRRGFCF 227
Score = 35.5 bits (78), Expect = 0.25
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+F+G LS + L++ F+ FGE+ +C + DP T +S G F +
Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVL 144
>D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 215
Score = 43.2 bits (97), Expect = 0.001
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 456 RVVLDKEMKVNWATSPXNQPKTDTSNH--HHIFVGDLSPEIETNILREAFAPFGEISNCR 629
+V+ KE K+N + K + IFVG LSP+ +RE F FGE+ +
Sbjct: 62 KVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIE 121
Query: 630 IVRDPQTLKSTGLCF 674
+ D +T K G CF
Sbjct: 122 LPMDNKTNKRRGFCF 136
Score = 35.5 bits (78), Expect = 0.25
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+F+G LS + L++ F+ FGE+ +C + DP T +S G F +
Sbjct: 8 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVL 53
>D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 306
Score = 43.2 bits (97), Expect = 0.001
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 456 RVVLDKEMKVNWATSPXNQPKTDTSNH--HHIFVGDLSPEIETNILREAFAPFGEISNCR 629
+V+ KE K+N + K + IFVG LSP+ +RE F FGE+ +
Sbjct: 153 KVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIE 212
Query: 630 IVRDPQTLKSTGLCF 674
+ D +T K G CF
Sbjct: 213 LPMDNKTNKRRGFCF 227
Score = 35.5 bits (78), Expect = 0.25
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+F+G LS + L++ F+ FGE+ +C + DP T +S G F +
Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVL 144
>D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 267
Score = 43.2 bits (97), Expect = 0.001
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 456 RVVLDKEMKVNWATSPXNQPKTDTSNH--HHIFVGDLSPEIETNILREAFAPFGEISNCR 629
+V+ KE K+N + K + IFVG LSP+ +RE F FGE+ +
Sbjct: 65 KVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIE 124
Query: 630 IVRDPQTLKSTGLCF 674
+ D +T K G CF
Sbjct: 125 LPMDNKTNKRRGFCF 139
Score = 35.5 bits (78), Expect = 0.25
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+F+G LS + L++ F+ FGE+ +C + DP T +S G F +
Sbjct: 11 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVL 56
>D26158-1|BAA21838.1| 350|Homo sapiens PLE21 protein protein.
Length = 350
Score = 43.2 bits (97), Expect = 0.001
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFV +LSPE + ++L + F PFG ++N +++RD T K G F
Sbjct: 269 IFVYNLSPEPDQSVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGF 312
Score = 32.7 bits (71), Expect = 1.8
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 248 NMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
N + L V L ++T+ +LFG IGD++ CK++R+
Sbjct: 22 NGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRD 64
>BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein.
Length = 378
Score = 43.2 bits (97), Expect = 0.001
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+F+G LS E + LRE F +G +++C ++RDPQT +S G F
Sbjct: 37 LFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGF 80
>BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear
ribonucleoprotein A3 protein.
Length = 378
Score = 43.2 bits (97), Expect = 0.001
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+F+G LS E + LRE F +G +++C ++RDPQT +S G F
Sbjct: 37 LFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGF 80
>BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 43.2 bits (97), Expect = 0.001
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 456 RVVLDKEMKVNWATSPXNQPKTDTSNH--HHIFVGDLSPEIETNILREAFAPFGEISNCR 629
+V+ KE K+N + K + IFVG LSP+ +RE F FGE+ +
Sbjct: 153 KVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIE 212
Query: 630 IVRDPQTLKSTGLCF 674
+ D +T K G CF
Sbjct: 213 LPMDNKTNKRRGFCF 227
Score = 35.5 bits (78), Expect = 0.25
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+F+G LS + L++ F+ FGE+ +C + DP T +S G F +
Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVL 144
>BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 43.2 bits (97), Expect = 0.001
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 456 RVVLDKEMKVNWATSPXNQPKTDTSNH--HHIFVGDLSPEIETNILREAFAPFGEISNCR 629
+V+ KE K+N + K + IFVG LSP+ +RE F FGE+ +
Sbjct: 153 KVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIE 212
Query: 630 IVRDPQTLKSTGLCF 674
+ D +T K G CF
Sbjct: 213 LPMDNKTNKRRGFCF 227
Score = 35.5 bits (78), Expect = 0.25
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+F+G LS + L++ F+ FGE+ +C + DP T +S G F +
Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVL 144
>BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 355
Score = 43.2 bits (97), Expect = 0.001
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 456 RVVLDKEMKVNWATSPXNQPKTDTSNH--HHIFVGDLSPEIETNILREAFAPFGEISNCR 629
+V+ KE K+N + K + IFVG LSP+ +RE F FGE+ +
Sbjct: 153 KVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIE 212
Query: 630 IVRDPQTLKSTGLCF 674
+ D +T K G CF
Sbjct: 213 LPMDNKTNKRRGFCF 227
Score = 35.5 bits (78), Expect = 0.25
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+F+G LS + L++ F+ FGE+ +C + DP T +S G F +
Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVL 144
>AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear
ribonucleoprotein A3 protein.
Length = 378
Score = 43.2 bits (97), Expect = 0.001
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+F+G LS E + LRE F +G +++C ++RDPQT +S G F
Sbjct: 37 LFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGF 80
>AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear
ribonucleoprotein D0B protein.
Length = 298
Score = 43.2 bits (97), Expect = 0.001
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 456 RVVLDKEMKVNWATSPXNQPKTDTSNH--HHIFVGDLSPEIETNILREAFAPFGEISNCR 629
+V+ KE K+N + K + IFVG LSP+ +RE F FGE+ +
Sbjct: 145 KVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIE 204
Query: 630 IVRDPQTLKSTGLCF 674
+ D +T K G CF
Sbjct: 205 LPMDNKTNKRRGFCF 219
Score = 35.5 bits (78), Expect = 0.25
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+F+G LS + L++ F+ FGE+ +C + DP T +S G F +
Sbjct: 91 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVL 136
>AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 336
Score = 43.2 bits (97), Expect = 0.001
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 456 RVVLDKEMKVNWATSPXNQPKTDTSNH--HHIFVGDLSPEIETNILREAFAPFGEISNCR 629
+V+ KE K+N + K + IFVG LSP+ +RE F FGE+ +
Sbjct: 134 KVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIE 193
Query: 630 IVRDPQTLKSTGLCF 674
+ D +T K G CF
Sbjct: 194 LPMDNKTNKRRGFCF 208
Score = 35.5 bits (78), Expect = 0.25
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+F+G LS + L++ F+ FGE+ +C + DP T +S G F +
Sbjct: 80 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVL 125
>AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 306
Score = 43.2 bits (97), Expect = 0.001
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 456 RVVLDKEMKVNWATSPXNQPKTDTSNH--HHIFVGDLSPEIETNILREAFAPFGEISNCR 629
+V+ KE K+N + K + IFVG LSP+ +RE F FGE+ +
Sbjct: 153 KVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIE 212
Query: 630 IVRDPQTLKSTGLCF 674
+ D +T K G CF
Sbjct: 213 LPMDNKTNKRRGFCF 227
Score = 35.5 bits (78), Expect = 0.25
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+F+G LS + L++ F+ FGE+ +C + DP T +S G F +
Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVL 144
>AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 355
Score = 43.2 bits (97), Expect = 0.001
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 456 RVVLDKEMKVNWATSPXNQPKTDTSNH--HHIFVGDLSPEIETNILREAFAPFGEISNCR 629
+V+ KE K+N + K + IFVG LSP+ +RE F FGE+ +
Sbjct: 153 KVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIE 212
Query: 630 IVRDPQTLKSTGLCF 674
+ D +T K G CF
Sbjct: 213 LPMDNKTNKRRGFCF 227
Score = 35.5 bits (78), Expect = 0.25
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+F+G LS + L++ F+ FGE+ +C + DP T +S G F +
Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVL 144
>AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein.
Length = 355
Score = 43.2 bits (97), Expect = 0.001
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 456 RVVLDKEMKVNWATSPXNQPKTDTSNH--HHIFVGDLSPEIETNILREAFAPFGEISNCR 629
+V+ KE K+N + K + IFVG LSP+ +RE F FGE+ +
Sbjct: 153 KVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIE 212
Query: 630 IVRDPQTLKSTGLCF 674
+ D +T K G CF
Sbjct: 213 LPMDNKTNKRRGFCF 227
Score = 35.5 bits (78), Expect = 0.25
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+F+G LS + L++ F+ FGE+ +C + DP T +S G F +
Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVL 144
>AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein.
Length = 378
Score = 43.2 bits (97), Expect = 0.001
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+F+G LS E + LRE F +G +++C ++RDPQT +S G F
Sbjct: 37 LFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGF 80
>M62843-1|AAA58396.1| 380|Homo sapiens brain protein protein.
Length = 380
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFV +LSP+ + ++L + F PFG ++N +++RD T K G F
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGF 342
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +3
Query: 498 SPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
SP T + ++ V L + R F GEI +C++VRD T +S G F
Sbjct: 33 SPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGF 91
Score = 31.1 bits (67), Expect = 5.4
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
L V L ++T+ +LFG IG+++ CK++R+
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRD 80
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTGGGHSAGRHEQA 457
++V NL P E L LFG G V K+IR+ + F T +A
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358
Query: 458 SGPRQGN 478
+G R G+
Sbjct: 359 NGYRLGD 365
>BC036071-1|AAH36071.1| 366|Homo sapiens ELAVL4 protein protein.
Length = 366
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFV +LSP+ + ++L + F PFG ++N +++RD T K G F
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGF 328
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +3
Query: 498 SPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
SP T + ++ V L + R F GEI +C++VRD T +S G F
Sbjct: 33 SPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGF 91
Score = 31.1 bits (67), Expect = 5.4
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
L V L ++T+ +LFG IG+++ CK++R+
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRD 80
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTGGGHSAGRHEQA 457
++V NL P E L LFG G V K+IR+ + F T +A
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAITSL 344
Query: 458 SGPRQGN 478
+G R G+
Sbjct: 345 NGYRLGD 351
>AY033998-1|AAK57541.1| 380|Homo sapiens HUDPRO1 protein.
Length = 380
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFV +LSP+ + ++L + F PFG ++N +++RD T K G F
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGF 342
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +3
Query: 498 SPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
SP T + ++ V L + R F GEI +C++VRD T +S G F
Sbjct: 33 SPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGF 91
Score = 31.1 bits (67), Expect = 5.4
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
L V L ++T+ +LFG IG+++ CK++R+
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRD 80
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTGGGHSAGRHEQA 457
++V NL P E L LFG G V K+IR+ + F T +A
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358
Query: 458 SGPRQGN 478
+G R G+
Sbjct: 359 NGYRLGD 365
>AY033997-1|AAK57540.1| 366|Homo sapiens HUD1 protein.
Length = 366
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFV +LSP+ + ++L + F PFG ++N +++RD T K G F
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGF 328
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +3
Query: 498 SPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
SP T + ++ V L + R F GEI +C++VRD T +S G F
Sbjct: 33 SPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGF 91
Score = 31.1 bits (67), Expect = 5.4
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
L V L ++T+ +LFG IG+++ CK++R+
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRD 80
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTGGGHSAGRHEQA 457
++V NL P E L LFG G V K+IR+ + F T +A
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
Query: 458 SGPRQGN 478
+G R G+
Sbjct: 345 NGYRLGD 351
>AY033996-1|AAK57539.1| 383|Homo sapiens HUD4 protein.
Length = 383
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFV +LSP+ + ++L + F PFG ++N +++RD T K G F
Sbjct: 302 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGF 345
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +3
Query: 498 SPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
SP T + ++ V L + R F GEI +C++VRD T +S G F
Sbjct: 50 SPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGF 108
Score = 31.1 bits (67), Expect = 5.4
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
L V L ++T+ +LFG IG+++ CK++R+
Sbjct: 65 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRD 97
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTGGGHSAGRHEQA 457
++V NL P E L LFG G V K+IR+ + F T +A
Sbjct: 302 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 361
Query: 458 SGPRQGN 478
+G R G+
Sbjct: 362 NGYRLGD 368
>AY033995-1|AAK57538.1| 366|Homo sapiens HUD3 protein.
Length = 366
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFV +LSP+ + ++L + F PFG ++N +++RD T K G F
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGF 328
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +3
Query: 498 SPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
SP T + ++ V L + R F GEI +C++VRD T +S G F
Sbjct: 33 SPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGF 91
Score = 31.1 bits (67), Expect = 5.4
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
L V L ++T+ +LFG IG+++ CK++R+
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRD 80
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTGGGHSAGRHEQA 457
++V NL P E L LFG G V K+IR+ + F T +A
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
Query: 458 SGPRQGN 478
+G R G+
Sbjct: 345 NGYRLGD 351
>AL592182-6|CAI15792.1| 385|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 385
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFV +LSP+ + ++L + F PFG ++N +++RD T K G F
Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGF 347
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +3
Query: 498 SPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
SP T + ++ V L + R F GEI +C++VRD T +S G F
Sbjct: 38 SPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGF 96
Score = 31.1 bits (67), Expect = 5.4
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
L V L ++T+ +LFG IG+++ CK++R+
Sbjct: 53 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRD 85
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTGGGHSAGRHEQA 457
++V NL P E L LFG G V K+IR+ + F T +A
Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 363
Query: 458 SGPRQGN 478
+G R G+
Sbjct: 364 NGYRLGD 370
>AL592182-5|CAI15793.1| 371|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 371
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFV +LSP+ + ++L + F PFG ++N +++RD T K G F
Sbjct: 290 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGF 333
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +3
Query: 498 SPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
SP T + ++ V L + R F GEI +C++VRD T +S G F
Sbjct: 38 SPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGF 96
Score = 31.1 bits (67), Expect = 5.4
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
L V L ++T+ +LFG IG+++ CK++R+
Sbjct: 53 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRD 85
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTGGGHSAGRHEQA 457
++V NL P E L LFG G V K+IR+ + F T +A
Sbjct: 290 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 349
Query: 458 SGPRQGN 478
+G R G+
Sbjct: 350 NGYRLGD 356
>AL592182-4|CAI15791.1| 380|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 380
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFV +LSP+ + ++L + F PFG ++N +++RD T K G F
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGF 342
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +3
Query: 498 SPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
SP T + ++ V L + R F GEI +C++VRD T +S G F
Sbjct: 33 SPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGF 91
Score = 31.1 bits (67), Expect = 5.4
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
L V L ++T+ +LFG IG+++ CK++R+
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRD 80
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTGGGHSAGRHEQA 457
++V NL P E L LFG G V K+IR+ + F T +A
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358
Query: 458 SGPRQGN 478
+G R G+
Sbjct: 359 NGYRLGD 365
>AL592182-3|CAI15790.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFV +LSP+ + ++L + F PFG ++N +++RD T K G F
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGF 328
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +3
Query: 498 SPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
SP T + ++ V L + R F GEI +C++VRD T +S G F
Sbjct: 33 SPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGF 91
Score = 31.1 bits (67), Expect = 5.4
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
L V L ++T+ +LFG IG+++ CK++R+
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRD 80
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTGGGHSAGRHEQA 457
++V NL P E L LFG G V K+IR+ + F T +A
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
Query: 458 SGPRQGN 478
+G R G+
Sbjct: 345 NGYRLGD 351
>AL592182-2|CAI15789.1| 383|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 383
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFV +LSP+ + ++L + F PFG ++N +++RD T K G F
Sbjct: 302 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGF 345
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +3
Query: 498 SPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
SP T + ++ V L + R F GEI +C++VRD T +S G F
Sbjct: 50 SPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGF 108
Score = 31.1 bits (67), Expect = 5.4
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
L V L ++T+ +LFG IG+++ CK++R+
Sbjct: 65 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRD 97
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTGGGHSAGRHEQA 457
++V NL P E L LFG G V K+IR+ + F T +A
Sbjct: 302 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 361
Query: 458 SGPRQGN 478
+G R G+
Sbjct: 362 NGYRLGD 368
>AL592182-1|CAI15788.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFV +LSP+ + ++L + F PFG ++N +++RD T K G F
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGF 328
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +3
Query: 498 SPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
SP T + ++ V L + R F GEI +C++VRD T +S G F
Sbjct: 33 SPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGF 91
Score = 31.1 bits (67), Expect = 5.4
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
L V L ++T+ +LFG IG+++ CK++R+
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRD 80
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTGGGHSAGRHEQA 457
++V NL P E L LFG G V K+IR+ + F T +A
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
Query: 458 SGPRQGN 478
+G R G+
Sbjct: 345 NGYRLGD 351
>AL583843-6|CAI14638.1| 385|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 385
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFV +LSP+ + ++L + F PFG ++N +++RD T K G F
Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGF 347
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +3
Query: 498 SPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
SP T + ++ V L + R F GEI +C++VRD T +S G F
Sbjct: 38 SPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGF 96
Score = 31.1 bits (67), Expect = 5.4
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
L V L ++T+ +LFG IG+++ CK++R+
Sbjct: 53 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRD 85
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTGGGHSAGRHEQA 457
++V NL P E L LFG G V K+IR+ + F T +A
Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 363
Query: 458 SGPRQGN 478
+G R G+
Sbjct: 364 NGYRLGD 370
>AL583843-5|CAI14639.1| 371|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 371
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFV +LSP+ + ++L + F PFG ++N +++RD T K G F
Sbjct: 290 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGF 333
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +3
Query: 498 SPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
SP T + ++ V L + R F GEI +C++VRD T +S G F
Sbjct: 38 SPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGF 96
Score = 31.1 bits (67), Expect = 5.4
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
L V L ++T+ +LFG IG+++ CK++R+
Sbjct: 53 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRD 85
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTGGGHSAGRHEQA 457
++V NL P E L LFG G V K+IR+ + F T +A
Sbjct: 290 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 349
Query: 458 SGPRQGN 478
+G R G+
Sbjct: 350 NGYRLGD 356
>AL583843-4|CAI14637.1| 380|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 380
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFV +LSP+ + ++L + F PFG ++N +++RD T K G F
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGF 342
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +3
Query: 498 SPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
SP T + ++ V L + R F GEI +C++VRD T +S G F
Sbjct: 33 SPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGF 91
Score = 31.1 bits (67), Expect = 5.4
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
L V L ++T+ +LFG IG+++ CK++R+
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRD 80
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTGGGHSAGRHEQA 457
++V NL P E L LFG G V K+IR+ + F T +A
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358
Query: 458 SGPRQGN 478
+G R G+
Sbjct: 359 NGYRLGD 365
>AL583843-3|CAI14636.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFV +LSP+ + ++L + F PFG ++N +++RD T K G F
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGF 328
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +3
Query: 498 SPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
SP T + ++ V L + R F GEI +C++VRD T +S G F
Sbjct: 33 SPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGF 91
Score = 31.1 bits (67), Expect = 5.4
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
L V L ++T+ +LFG IG+++ CK++R+
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRD 80
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTGGGHSAGRHEQA 457
++V NL P E L LFG G V K+IR+ + F T +A
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
Query: 458 SGPRQGN 478
+G R G+
Sbjct: 345 NGYRLGD 351
>AL583843-2|CAI14635.1| 383|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 383
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFV +LSP+ + ++L + F PFG ++N +++RD T K G F
Sbjct: 302 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGF 345
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +3
Query: 498 SPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
SP T + ++ V L + R F GEI +C++VRD T +S G F
Sbjct: 50 SPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGF 108
Score = 31.1 bits (67), Expect = 5.4
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
L V L ++T+ +LFG IG+++ CK++R+
Sbjct: 65 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRD 97
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTGGGHSAGRHEQA 457
++V NL P E L LFG G V K+IR+ + F T +A
Sbjct: 302 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 361
Query: 458 SGPRQGN 478
+G R G+
Sbjct: 362 NGYRLGD 368
>AL583843-1|CAI14634.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFV +LSP+ + ++L + F PFG ++N +++RD T K G F
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGF 328
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +3
Query: 498 SPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
SP T + ++ V L + R F GEI +C++VRD T +S G F
Sbjct: 33 SPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGF 91
Score = 31.1 bits (67), Expect = 5.4
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
L V L ++T+ +LFG IG+++ CK++R+
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRD 80
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTGGGHSAGRHEQA 457
++V NL P E L LFG G V K+IR+ + F T +A
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
Query: 458 SGPRQGN 478
+G R G+
Sbjct: 345 NGYRLGD 351
>U29943-1|AAA70417.1| 346|Homo sapiens Hel-N2 protein.
Length = 346
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFV +L+P+ + +IL + F PFG ++N +++RD T K G F
Sbjct: 265 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 308
Score = 33.9 bits (74), Expect = 0.77
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +3
Query: 486 NWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTG 665
N +SP + T+ S + + V L + L+ F GEI +C++VRD T +S G
Sbjct: 23 NNCSSPVDSGNTEDSKTN-LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLG 81
Query: 666 LCF 674
F
Sbjct: 82 YGF 84
Score = 33.9 bits (74), Expect = 0.77
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +2
Query: 254 GDESHPKT-LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
G+ KT L V L ++T+ L +LFG IG+++ CK++R+
Sbjct: 32 GNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRD 73
Score = 31.9 bits (69), Expect = 3.1
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +2
Query: 245 ANMGDESHPKT---LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTC 415
A + HP T ++V NL P E L +FG G V K+IR+ + F
Sbjct: 251 AGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVT 310
Query: 416 HTGGGHSAGRHEQASGPRQGN 478
T +A +G R G+
Sbjct: 311 MTNYDEAAMAIRSLNGYRLGD 331
>U12431-1|AAA69698.1| 359|Homo sapiens ELAV-like neuronal protein 1
protein.
Length = 359
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFV +L+P+ + +IL + F PFG ++N +++RD T K G F
Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 321
Score = 33.9 bits (74), Expect = 0.77
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +3
Query: 486 NWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTG 665
N +SP + T+ S + + V L + L+ F GEI +C++VRD T +S G
Sbjct: 23 NNCSSPVDSGNTEDSKTN-LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLG 81
Query: 666 LCF 674
F
Sbjct: 82 YGF 84
Score = 33.9 bits (74), Expect = 0.77
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +2
Query: 254 GDESHPKT-LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
G+ KT L V L ++T+ L +LFG IG+++ CK++R+
Sbjct: 32 GNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRD 73
Score = 31.9 bits (69), Expect = 3.1
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +2
Query: 245 ANMGDESHPKT---LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTC 415
A + HP T ++V NL P E L +FG G V K+IR+ + F
Sbjct: 264 AGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVT 323
Query: 416 HTGGGHSAGRHEQASGPRQGN 478
T +A +G R G+
Sbjct: 324 MTNYDEAAMAIRSLNGYRLGD 344
>L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein
protein.
Length = 424
Score = 42.3 bits (95), Expect = 0.002
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEI-SN 623
MN + K ++VN A++ + D + IF+G+L PEI+ +L + F+ FG I
Sbjct: 74 MNMIKLYGKPIRVNKASA--HNKNLDVGAN--IFIGNLDPEIDEKLLYDTFSAFGVILQT 129
Query: 624 CRIVRDPQTLKSTGLCF 674
+I+RDP T S G F
Sbjct: 130 PKIMRDPDTGNSKGYAF 146
Score = 33.9 bits (74), Expect = 0.77
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDV-KGCKIIREP--GNDP-YAFLEF 409
+++GNLDP + E L F G + + KI+R+P GN YAF+ F
Sbjct: 102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINF 149
>D89678-1|BAA22860.1| 271|Homo sapiens A+U-rich element RNA binding
factor protein.
Length = 271
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+FVG LSP+ ++E F FGEI N + D +T + G CF
Sbjct: 86 VFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCF 129
Score = 34.7 bits (76), Expect = 0.44
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+F+G LS + L E + FGE+ +C I DP T +S G F +
Sbjct: 1 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVL 46
>D89092-1|BAA24361.1| 301|Homo sapiens hnRNP JKTBP protein.
Length = 301
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+FVG LSP+ ++E F FGEI N + D +T + G CF
Sbjct: 116 VFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCF 159
Score = 34.7 bits (76), Expect = 0.44
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+F+G LS + L E + FGE+ +C I DP T +S G F +
Sbjct: 31 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVL 76
>CR407623-1|CAG28551.1| 420|Homo sapiens HNRPDL protein.
Length = 420
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+FVG LSP+ ++E F FGEI N + D +T + G CF
Sbjct: 235 VFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCF 278
Score = 34.7 bits (76), Expect = 0.44
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+F+G LS + L E + FGE+ +C I DP T +S G F +
Sbjct: 150 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVL 195
>BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 42.3 bits (95), Expect = 0.002
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEI-SN 623
MN + K ++VN A++ + D + IF+G+L PEI+ +L + F+ FG I
Sbjct: 74 MNMIKLYGKPIRVNKASA--HNKNLDVGAN--IFIGNLDPEIDEKLLYDTFSAFGVILQT 129
Query: 624 CRIVRDPQTLKSTGLCF 674
+I+RDP T S G F
Sbjct: 130 PKIMRDPDTGNSKGYAF 146
Score = 33.9 bits (74), Expect = 0.77
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDV-KGCKIIREP--GNDP-YAFLEF 409
+++GNLDP + E L F G + + KI+R+P GN YAF+ F
Sbjct: 102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINF 149
>BC071944-1|AAH71944.1| 420|Homo sapiens heterogeneous nuclear
ribonucleoprotein D-like protein.
Length = 420
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+FVG LSP+ ++E F FGEI N + D +T + G CF
Sbjct: 235 VFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCF 278
Score = 34.7 bits (76), Expect = 0.44
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+F+G LS + L E + FGE+ +C I DP T +S G F +
Sbjct: 150 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVL 195
>BC030692-1|AAH30692.1| 346|Homo sapiens ELAVL2 protein protein.
Length = 346
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFV +L+P+ + +IL + F PFG ++N +++RD T K G F
Sbjct: 265 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 308
Score = 33.9 bits (74), Expect = 0.77
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +3
Query: 486 NWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTG 665
N +SP + T+ S + + V L + L+ F GEI +C++VRD T +S G
Sbjct: 23 NNCSSPVDSGNTEDSKTN-LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLG 81
Query: 666 LCF 674
F
Sbjct: 82 YGF 84
Score = 33.9 bits (74), Expect = 0.77
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +2
Query: 254 GDESHPKT-LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
G+ KT L V L ++T+ L +LFG IG+++ CK++R+
Sbjct: 32 GNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRD 73
Score = 31.5 bits (68), Expect = 4.1
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +2
Query: 245 ANMGDESHPKT---LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTC 415
A + HP T ++V NL P E L +FG G V K+IR+ + F
Sbjct: 251 AGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVT 310
Query: 416 HTGGGHSAGRHEQASGPRQGN 478
T +A +G R G+
Sbjct: 311 MTNYDEAAMAIASLNGYRLGD 331
>BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 42.3 bits (95), Expect = 0.002
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEI-SN 623
MN + K ++VN A++ + D + IF+G+L PEI+ +L + F+ FG I
Sbjct: 74 MNMIKLYGKPIRVNKASA--HNKNLDVGAN--IFIGNLDPEIDEKLLYDTFSAFGVILQT 129
Query: 624 CRIVRDPQTLKSTGLCF 674
+I+RDP T S G F
Sbjct: 130 PKIMRDPDTGNSKGYAF 146
Score = 33.9 bits (74), Expect = 0.77
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDV-KGCKIIREP--GNDP-YAFLEF 409
+++GNLDP + E L F G + + KI+R+P GN YAF+ F
Sbjct: 102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINF 149
>BC011714-1|AAH11714.1| 420|Homo sapiens heterogeneous nuclear
ribonucleoprotein D-like protein.
Length = 420
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+FVG LSP+ ++E F FGEI N + D +T + G CF
Sbjct: 235 VFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCF 278
Score = 34.7 bits (76), Expect = 0.44
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+F+G LS + L E + FGE+ +C I DP T +S G F +
Sbjct: 150 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVL 195
>BC007392-1|AAH07392.2| 415|Homo sapiens HNRPDL protein protein.
Length = 415
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+FVG LSP+ ++E F FGEI N + D +T + G CF
Sbjct: 230 VFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCF 273
Score = 34.7 bits (76), Expect = 0.44
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+F+G LS + L E + FGE+ +C I DP T +S G F +
Sbjct: 145 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVL 190
>BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 42.3 bits (95), Expect = 0.002
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEI-SN 623
MN + K ++VN A++ + D + IF+G+L PEI+ +L + F+ FG I
Sbjct: 74 MNMIKLYGKPIRVNKASA--HNKNLDVGAN--IFIGNLDPEIDEKLLYDTFSAFGVILQT 129
Query: 624 CRIVRDPQTLKSTGLCF 674
+I+RDP T S G F
Sbjct: 130 PKIMRDPDTGNSKGYAF 146
Score = 33.9 bits (74), Expect = 0.77
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDV-KGCKIIREP--GNDP-YAFLEF 409
+++GNLDP + E L F G + + KI+R+P GN YAF+ F
Sbjct: 102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINF 149
>AY453824-1|AAR17782.1| 298|Homo sapiens CArG binding factor
protein.
Length = 298
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+FVG LSP+ ++E F FGEI N + D +T + G CF
Sbjct: 113 VFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCF 156
Score = 34.7 bits (76), Expect = 0.44
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+F+G LS + L E + FGE+ +C I DP T +S G F +
Sbjct: 28 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVL 73
>AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 42.3 bits (95), Expect = 0.002
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEI-SN 623
MN + K ++VN A++ + D + IF+G+L PEI+ +L + F+ FG I
Sbjct: 74 MNMIKLYGKPIRVNKASA--HNKNLDVGAN--IFIGNLDPEIDEKLLYDTFSAFGVILQT 129
Query: 624 CRIVRDPQTLKSTGLCF 674
+I+RDP T S G F
Sbjct: 130 PKIMRDPDTGNSKGYAF 146
Score = 33.9 bits (74), Expect = 0.77
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDV-KGCKIIREP--GNDP-YAFLEF 409
+++GNLDP + E L F G + + KI+R+P GN YAF+ F
Sbjct: 102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINF 149
>AL591493-1|CAI12553.1| 190|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 190
Score = 42.3 bits (95), Expect = 0.002
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEI-SN 623
MN + K ++VN A++ + D + IF+G+L PEI+ +L + F+ FG I
Sbjct: 31 MNMIKLYGKPIRVNKASA--HNKNLDVGAN--IFIGNLDPEIDEKLLYDTFSAFGVILQT 86
Query: 624 CRIVRDPQTLKSTGLCF 674
+I+RDP T S G F
Sbjct: 87 PKIMRDPDTGNSKGYAF 103
Score = 33.9 bits (74), Expect = 0.77
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDV-KGCKIIREP--GNDP-YAFLEF 409
+++GNLDP + E L F G + + KI+R+P GN YAF+ F
Sbjct: 59 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINF 106
>AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 42.3 bits (95), Expect = 0.002
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEI-SN 623
MN + K ++VN A++ + D + IF+G+L PEI+ +L + F+ FG I
Sbjct: 74 MNMIKLYGKPIRVNKASA--HNKNLDVGAN--IFIGNLDPEIDEKLLYDTFSAFGVILQT 129
Query: 624 CRIVRDPQTLKSTGLCF 674
+I+RDP T S G F
Sbjct: 130 PKIMRDPDTGNSKGYAF 146
Score = 33.9 bits (74), Expect = 0.77
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDV-KGCKIIREP--GNDP-YAFLEF 409
+++GNLDP + E L F G + + KI+R+P GN YAF+ F
Sbjct: 102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINF 149
>AL590487-1|CAI12647.1| 190|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 190
Score = 42.3 bits (95), Expect = 0.002
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEI-SN 623
MN + K ++VN A++ + D + IF+G+L PEI+ +L + F+ FG I
Sbjct: 31 MNMIKLYGKPIRVNKASA--HNKNLDVGAN--IFIGNLDPEIDEKLLYDTFSAFGVILQT 86
Query: 624 CRIVRDPQTLKSTGLCF 674
+I+RDP T S G F
Sbjct: 87 PKIMRDPDTGNSKGYAF 103
Score = 33.9 bits (74), Expect = 0.77
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDV-KGCKIIREP--GNDP-YAFLEF 409
+++GNLDP + E L F G + + KI+R+P GN YAF+ F
Sbjct: 59 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINF 106
>AL161628-4|CAI13378.1| 387|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 387
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFV +L+P+ + +IL + F PFG ++N +++RD T K G F
Sbjct: 306 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 349
Score = 33.9 bits (74), Expect = 0.77
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +3
Query: 486 NWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTG 665
N +SP + T+ S + + V L + L+ F GEI +C++VRD T +S G
Sbjct: 51 NNCSSPVDSGNTEDSKTN-LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLG 109
Query: 666 LCF 674
F
Sbjct: 110 YGF 112
Score = 33.9 bits (74), Expect = 0.77
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +2
Query: 254 GDESHPKT-LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
G+ KT L V L ++T+ L +LFG IG+++ CK++R+
Sbjct: 60 GNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRD 101
Score = 31.5 bits (68), Expect = 4.1
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +2
Query: 245 ANMGDESHPKT---LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTC 415
A + HP T ++V NL P E L +FG G V K+IR+ + F
Sbjct: 292 AGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVT 351
Query: 416 HTGGGHSAGRHEQASGPRQGN 478
T +A +G R G+
Sbjct: 352 MTNYDEAAMAIASLNGYRLGD 372
>AL161628-2|CAC22160.1| 359|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 359
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFV +L+P+ + +IL + F PFG ++N +++RD T K G F
Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 321
Score = 33.9 bits (74), Expect = 0.77
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +3
Query: 486 NWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTG 665
N +SP + T+ S + + V L + L+ F GEI +C++VRD T +S G
Sbjct: 23 NNCSSPVDSGNTEDSKTN-LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLG 81
Query: 666 LCF 674
F
Sbjct: 82 YGF 84
Score = 33.9 bits (74), Expect = 0.77
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +2
Query: 254 GDESHPKT-LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
G+ KT L V L ++T+ L +LFG IG+++ CK++R+
Sbjct: 32 GNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRD 73
Score = 31.5 bits (68), Expect = 4.1
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +2
Query: 245 ANMGDESHPKT---LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTC 415
A + HP T ++V NL P E L +FG G V K+IR+ + F
Sbjct: 264 AGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVT 323
Query: 416 HTGGGHSAGRHEQASGPRQGN 478
T +A +G R G+
Sbjct: 324 MTNYDEAAMAIASLNGYRLGD 344
>AL161628-1|CAI13376.1| 346|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 346
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFV +L+P+ + +IL + F PFG ++N +++RD T K G F
Sbjct: 265 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 308
Score = 33.9 bits (74), Expect = 0.77
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +3
Query: 486 NWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTG 665
N +SP + T+ S + + V L + L+ F GEI +C++VRD T +S G
Sbjct: 23 NNCSSPVDSGNTEDSKTN-LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLG 81
Query: 666 LCF 674
F
Sbjct: 82 YGF 84
Score = 33.9 bits (74), Expect = 0.77
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +2
Query: 254 GDESHPKT-LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
G+ KT L V L ++T+ L +LFG IG+++ CK++R+
Sbjct: 32 GNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRD 73
Score = 31.5 bits (68), Expect = 4.1
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +2
Query: 245 ANMGDESHPKT---LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTC 415
A + HP T ++V NL P E L +FG G V K+IR+ + F
Sbjct: 251 AGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVT 310
Query: 416 HTGGGHSAGRHEQASGPRQGN 478
T +A +G R G+
Sbjct: 311 MTNYDEAAMAIASLNGYRLGD 331
>AC124016-2|AAY40914.1| 420|Homo sapiens unknown protein.
Length = 420
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+FVG LSP+ ++E F FGEI N + D +T + G CF
Sbjct: 235 VFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCF 278
Score = 34.7 bits (76), Expect = 0.44
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+F+G LS + L E + FGE+ +C I DP T +S G F +
Sbjct: 150 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVL 195
>AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein.
Length = 362
Score = 42.3 bits (95), Expect = 0.002
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+F+G LS + LRE F FGE+ C ++RDP T +S G F
Sbjct: 22 MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGF 65
Score = 35.1 bits (77), Expect = 0.33
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 257 DESH-PKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP 379
D H P +++G L T+ L FGQ G+VK C ++R+P
Sbjct: 14 DSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDP 55
>AB209294-1|BAD92531.1| 367|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B) vari
protein.
Length = 367
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFV +L+P+ + +IL + F PFG ++N +++RD T K G F
Sbjct: 286 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 329
Score = 33.9 bits (74), Expect = 0.77
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +3
Query: 486 NWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTG 665
N +SP + T+ S + + V L + L+ F GEI +C++VRD T +S G
Sbjct: 31 NNCSSPVDSGNTEDSKTN-LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLG 89
Query: 666 LCF 674
F
Sbjct: 90 YGF 92
Score = 33.9 bits (74), Expect = 0.77
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +2
Query: 254 GDESHPKT-LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
G+ KT L V L ++T+ L +LFG IG+++ CK++R+
Sbjct: 40 GNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRD 81
Score = 31.5 bits (68), Expect = 4.1
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +2
Query: 245 ANMGDESHPKT---LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTC 415
A + HP T ++V NL P E L +FG G V K+IR+ + F
Sbjct: 272 AGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVT 331
Query: 416 HTGGGHSAGRHEQASGPRQGN 478
T +A +G R G+
Sbjct: 332 MTNYDEAAMAIASLNGYRLGD 352
>AB066484-1|BAB62188.1| 244|Homo sapiens JKTBP1delta6 protein.
Length = 244
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+FVG LSP+ ++E F FGEI N + D +T + G CF
Sbjct: 116 VFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCF 159
Score = 34.7 bits (76), Expect = 0.44
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+F+G LS + L E + FGE+ +C I DP T +S G F +
Sbjct: 31 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVL 76
>AB017019-1|BAA75241.1| 420|Homo sapiens JKTBP2 protein.
Length = 420
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+FVG LSP+ ++E F FGEI N + D +T + G CF
Sbjct: 235 VFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCF 278
Score = 34.7 bits (76), Expect = 0.44
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+F+G LS + L E + FGE+ +C I DP T +S G F +
Sbjct: 150 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVL 195
>AB017018-2|BAA75240.1| 301|Homo sapiens JKTBP1 protein.
Length = 301
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+FVG LSP+ ++E F FGEI N + D +T + G CF
Sbjct: 116 VFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCF 159
Score = 34.7 bits (76), Expect = 0.44
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+F+G LS + L E + FGE+ +C I DP T +S G F +
Sbjct: 31 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVL 76
>AB017018-1|BAA75239.1| 420|Homo sapiens JKTBP2 protein.
Length = 420
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+FVG LSP+ ++E F FGEI N + D +T + G CF
Sbjct: 235 VFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCF 278
Score = 34.7 bits (76), Expect = 0.44
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+F+G LS + L E + FGE+ +C I DP T +S G F +
Sbjct: 150 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVL 195
>AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein.
Length = 362
Score = 42.3 bits (95), Expect = 0.002
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+F+G LS + LRE F FGE+ C ++RDP T +S G F
Sbjct: 22 MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGF 65
Score = 35.1 bits (77), Expect = 0.33
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 257 DESH-PKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP 379
D H P +++G L T+ L FGQ G+VK C ++R+P
Sbjct: 14 DSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDP 55
>X03910-1|CAA27544.1| 225|Homo sapiens protein ( Human mRNA for
hnRNP C protein cross-reacting with C1 and C2 hnRNP
core proteins. ).
Length = 225
Score = 41.9 bits (94), Expect = 0.003
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFVG LSP+ +RE F FGE+ + + D +T K G CF
Sbjct: 174 IFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCF 217
Score = 30.3 bits (65), Expect = 9.5
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +2
Query: 191 ILILVFIDVKKVIDRLR*ANMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKI 367
++I I+ KVID R M + K ++VG L P E + FG G+V+ ++
Sbjct: 145 VMIKKNINSWKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIEL 203
>AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b,
subunit 4 variant protein.
Length = 424
Score = 41.9 bits (94), Expect = 0.003
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +3
Query: 540 HIFVGDLSPEIETNILREAFAPFGEI-SNCRIVRDPQTLKSTGLCF 674
+IF+G+L PEI+ +L + F+ FG I +I+RDP T S G F
Sbjct: 101 NIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Score = 33.9 bits (74), Expect = 0.77
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDV-KGCKIIREP--GNDP-YAFLEF 409
+++GNLDP + E L F G + + KI+R+P GN YAF+ F
Sbjct: 102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINF 149
>M29064-1|AAA60271.1| 353|Homo sapiens SNRPB1 protein.
Length = 353
Score = 41.5 bits (93), Expect = 0.004
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = +3
Query: 477 MKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLK 656
M+ T P + K + +F+G LS E LR + +G++++C ++RDP + +
Sbjct: 1 MEKTLETVPLERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKR 60
Query: 657 STGLCF 674
S G F
Sbjct: 61 SRGFGF 66
>D28877-1|BAA06031.1| 353|Homo sapiens hnRNP B1 protein protein.
Length = 353
Score = 41.5 bits (93), Expect = 0.004
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = +3
Query: 477 MKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLK 656
M+ T P + K + +F+G LS E LR + +G++++C ++RDP + +
Sbjct: 1 MEKTLETVPLERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKR 60
Query: 657 STGLCF 674
S G F
Sbjct: 61 SRGFGF 66
>AL662864-2|CAI40931.1| 200|Homo sapiens novel protein similar to
poly(A)binding protein, cytoplasmic 1 (LOC340530)
protein.
Length = 200
Score = 41.1 bits (92), Expect = 0.005
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VGDL PE+ +L E F+P G I + RI RD T +S G +
Sbjct: 4 LYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAY 47
Score = 33.9 bits (74), Expect = 0.77
Identities = 17/73 (23%), Positives = 35/73 (47%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
+N V+ + +++ W+ + K+ N +F+ +L I+ L F+ FG I +C
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVGN---VFIKNLGKTIDNKALYNIFSAFGNILSC 119
Query: 627 RIVRDPQTLKSTG 665
++ D + K G
Sbjct: 120 KVACDEKGPKGYG 132
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 275 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
+LYVG+L P VTE L F G + +I R+
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRD 36
>AL662864-1|CAI40930.1| 200|Homo sapiens novel protein similar to
poly(A)binding protein, cytoplasmic 1 (LOC340529)
protein.
Length = 200
Score = 41.1 bits (92), Expect = 0.005
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VGDL PE+ +L E F+P G I + RI RD T +S G +
Sbjct: 4 LYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAY 47
Score = 33.9 bits (74), Expect = 0.77
Identities = 17/73 (23%), Positives = 35/73 (47%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
+N V+ + +++ W+ + K+ N +F+ +L I+ L F+ FG I +C
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVGN---VFIKNLGKTIDNKALYNIFSAFGNILSC 119
Query: 627 RIVRDPQTLKSTG 665
++ D + K G
Sbjct: 120 KVACDEKGPKGYG 132
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 275 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
+LYVG+L P VTE L F G + +I R+
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRD 36
>U63289-1|AAC50895.1| 482|Homo sapiens CUG-BP/hNab50 protein.
Length = 482
Score = 40.7 bits (91), Expect = 0.007
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +3
Query: 501 PXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
P + K + +F+G +S + N +R F+ FG+I CRI+R P L S G F
Sbjct: 96 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGL-SRGCAF 152
>DQ160195-1|AAZ93379.1| 314|Homo sapiens cyclophilin-33B protein.
Length = 314
Score = 40.7 bits (91), Expect = 0.007
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VG L+ E++ +L AF PFG+I++ +I D +T K G F
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAF 51
>BC107736-1|AAI07737.1| 301|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 301
Score = 40.7 bits (91), Expect = 0.007
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VG L+ E++ +L AF PFG+I++ +I D +T K G F
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAF 51
>BC031079-1|AAH31079.1| 483|Homo sapiens CUG triplet repeat, RNA
binding protein 1 protein.
Length = 483
Score = 40.7 bits (91), Expect = 0.007
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +3
Query: 501 PXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
P + K + +F+G +S + N +R F+ FG+I CRI+R P L S G F
Sbjct: 96 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGL-SRGCAF 152
>BC008451-1|AAH08451.1| 301|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 301
Score = 40.7 bits (91), Expect = 0.007
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VG L+ E++ +L AF PFG+I++ +I D +T K G F
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAF 51
>BC004898-1|AAH04898.1| 301|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 301
Score = 40.7 bits (91), Expect = 0.007
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VG L+ E++ +L AF PFG+I++ +I D +T K G F
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAF 51
>AL049824-4|CAI19350.1| 301|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 301
Score = 40.7 bits (91), Expect = 0.007
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VG L+ E++ +L AF PFG+I++ +I D +T K G F
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAF 51
>AL049824-2|CAI19348.1| 296|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 296
Score = 40.7 bits (91), Expect = 0.007
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VG L+ E++ +L AF PFG+I++ +I D +T K G F
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAF 51
>AL049824-1|CAI19347.1| 314|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 314
Score = 40.7 bits (91), Expect = 0.007
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VG L+ E++ +L AF PFG+I++ +I D +T K G F
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAF 51
>AL035404-8|CAI19579.1| 301|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 301
Score = 40.7 bits (91), Expect = 0.007
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VG L+ E++ +L AF PFG+I++ +I D +T K G F
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAF 51
>AL035404-6|CAI19577.1| 296|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 296
Score = 40.7 bits (91), Expect = 0.007
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VG L+ E++ +L AF PFG+I++ +I D +T K G F
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAF 51
>AL035404-5|CAI19576.1| 314|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 314
Score = 40.7 bits (91), Expect = 0.007
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VG L+ E++ +L AF PFG+I++ +I D +T K G F
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAF 51
>AL033527-11|CAI19410.1| 296|Homo sapiens peptidylprolyl isomerase
E (cyclophilin E) protein.
Length = 296
Score = 40.7 bits (91), Expect = 0.007
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VG L+ E++ +L AF PFG+I++ +I D +T K G F
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAF 51
>AL033527-10|CAI19409.1| 314|Homo sapiens peptidylprolyl isomerase
E (cyclophilin E) protein.
Length = 314
Score = 40.7 bits (91), Expect = 0.007
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VG L+ E++ +L AF PFG+I++ +I D +T K G F
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAF 51
>AJ007988-1|CAC20566.1| 486|Homo sapiens deadenylation factor
CUG-BP protein.
Length = 486
Score = 40.7 bits (91), Expect = 0.007
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +3
Query: 501 PXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
P + K + +F+G +S + N +R F+ FG+I CRI+R P L S G F
Sbjct: 96 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGL-SRGCAF 152
>AF267534-1|AAF78956.1| 483|Homo sapiens CUG-binding protein A
isoform protein.
Length = 483
Score = 40.7 bits (91), Expect = 0.007
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +3
Query: 501 PXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
P + K + +F+G +S + N +R F+ FG+I CRI+R P L S G F
Sbjct: 96 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGL-SRGCAF 152
>AF267533-1|AAF78955.1| 486|Homo sapiens CUG-binding protein LYLQ
isoform protein.
Length = 486
Score = 40.7 bits (91), Expect = 0.007
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +3
Query: 501 PXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
P + K + +F+G +S + N +R F+ FG+I CRI+R P L S G F
Sbjct: 96 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGL-SRGCAF 152
>AF248648-1|AAF86230.1| 486|Homo sapiens RNA-binding protein
BRUNOL2 protein.
Length = 486
Score = 40.7 bits (91), Expect = 0.007
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +3
Query: 501 PXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
P + K + +F+G +S + N +R F+ FG+I CRI+R P L S G F
Sbjct: 96 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGL-SRGCAF 152
>AF104013-1|AAD19907.1| 296|Homo sapiens peptidyl-prolyl cis-trans
isomerase E protein.
Length = 296
Score = 40.7 bits (91), Expect = 0.007
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VG L+ E++ +L AF PFG+I++ +I D +T K G F
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAF 51
>AF104012-1|AAD19906.1| 301|Homo sapiens peptidyl-prolyl cis-trans
isomerase E protein.
Length = 301
Score = 40.7 bits (91), Expect = 0.007
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VG L+ E++ +L AF PFG+I++ +I D +T K G F
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAF 51
>AF042386-1|AAC00007.1| 296|Homo sapiens cyclophilin-33B protein.
Length = 296
Score = 40.7 bits (91), Expect = 0.007
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VG L+ E++ +L AF PFG+I++ +I D +T K G F
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAF 51
>AF042385-1|AAC00006.1| 301|Homo sapiens cyclophilin-33A protein.
Length = 301
Score = 40.7 bits (91), Expect = 0.007
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VG L+ E++ +L AF PFG+I++ +I D +T K G F
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAF 51
>L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein.
Length = 530
Score = 40.3 bits (90), Expect = 0.009
Identities = 24/86 (27%), Positives = 42/86 (48%)
Frame = +3
Query: 459 VVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 638
+V + + N A + N + ++ ++VG L I ++LR F PFG I + +++
Sbjct: 224 IVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMM 283
Query: 639 DPQTLKSTGLCFXIIXKXSRCPXPAI 716
D +T +S G F I S C A+
Sbjct: 284 DSETGRSKGYGF-ITFSDSECAKKAL 308
>L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein.
Length = 524
Score = 40.3 bits (90), Expect = 0.009
Identities = 24/86 (27%), Positives = 42/86 (48%)
Frame = +3
Query: 459 VVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 638
+V + + N A + N + ++ ++VG L I ++LR F PFG I + +++
Sbjct: 224 IVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMM 283
Query: 639 DPQTLKSTGLCFXIIXKXSRCPXPAI 716
D +T +S G F I S C A+
Sbjct: 284 DSETGRSKGYGF-ITFSDSECAKKAL 308
>BX537770-1|CAD97833.1| 373|Homo sapiens hypothetical protein
protein.
Length = 373
Score = 40.3 bits (90), Expect = 0.009
Identities = 24/86 (27%), Positives = 42/86 (48%)
Frame = +3
Query: 459 VVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 638
+V + + N A + N + ++ ++VG L I ++LR F PFG I + +++
Sbjct: 67 IVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMM 126
Query: 639 DPQTLKSTGLCFXIIXKXSRCPXPAI 716
D +T +S G F I S C A+
Sbjct: 127 DSETGRSKGYGF-ITFSDSECAKKAL 151
>BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 40.3 bits (90), Expect = 0.009
Identities = 24/86 (27%), Positives = 42/86 (48%)
Frame = +3
Query: 459 VVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 638
+V + + N A + N + ++ ++VG L I ++LR F PFG I + +++
Sbjct: 224 IVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMM 283
Query: 639 DPQTLKSTGLCFXIIXKXSRCPXPAI 716
D +T +S G F I S C A+
Sbjct: 284 DSETGRSKGYGF-ITFSDSECAKKAL 308
>BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein.
Length = 508
Score = 40.3 bits (90), Expect = 0.009
Identities = 24/86 (27%), Positives = 42/86 (48%)
Frame = +3
Query: 459 VVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 638
+V + + N A + N + ++ ++VG L I ++LR F PFG I + +++
Sbjct: 202 IVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMM 261
Query: 639 DPQTLKSTGLCFXIIXKXSRCPXPAI 716
D +T +S G F I S C A+
Sbjct: 262 DSETGRSKGYGF-ITFSDSECAKKAL 286
>AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif protein
39 protein.
Length = 524
Score = 40.3 bits (90), Expect = 0.009
Identities = 24/86 (27%), Positives = 42/86 (48%)
Frame = +3
Query: 459 VVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 638
+V + + N A + N + ++ ++VG L I ++LR F PFG I + +++
Sbjct: 224 IVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMM 283
Query: 639 DPQTLKSTGLCFXIIXKXSRCPXPAI 716
D +T +S G F I S C A+
Sbjct: 284 DSETGRSKGYGF-ITFSDSECAKKAL 308
>AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 40.3 bits (90), Expect = 0.009
Identities = 24/86 (27%), Positives = 42/86 (48%)
Frame = +3
Query: 459 VVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 638
+V + + N A + N + ++ ++VG L I ++LR F PFG I + +++
Sbjct: 224 IVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMM 283
Query: 639 DPQTLKSTGLCFXIIXKXSRCPXPAI 716
D +T +S G F I S C A+
Sbjct: 284 DSETGRSKGYGF-ITFSDSECAKKAL 308
>Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding
protein II protein.
Length = 522
Score = 39.9 bits (89), Expect = 0.012
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN V+ K +++ W+ + K+ N IF+ +L I+ L + F+ FG I +C
Sbjct: 47 MNFDVIKGKPVRIMWSQRDPSLRKSGVGN---IFIKNLDKSIDNKALYDTFSAFGNILSC 103
Query: 627 RIVRDPQTLKSTG 665
++V D K G
Sbjct: 104 KVVCDENGSKGYG 116
Score = 32.3 bits (70), Expect = 2.4
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEF 409
+++ NLD S+ L F G++ CK++ E G+ Y F+ F
Sbjct: 76 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHF 120
>Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for
polyA binding protein. ).
Length = 633
Score = 39.9 bits (89), Expect = 0.012
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN V+ K +++ W+ + K+ N IF+ +L I+ L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLRKSGVGN---IFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 627 RIVRDPQTLKSTG 665
++V D K G
Sbjct: 129 KVVCDENGSKGYG 141
Score = 39.1 bits (87), Expect = 0.021
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VGDL P++ +L E F+P G I + R+ RD T +S G +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAY 56
Score = 32.3 bits (70), Expect = 2.4
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEF 409
+++ NLD S+ L F G++ CK++ E G+ Y F+ F
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHF 145
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 248 NMGDESHPK-TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
N S+P +LYVG+L P VTE L F G + ++ R+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRD 45
>U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein
protein.
Length = 636
Score = 39.9 bits (89), Expect = 0.012
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN V+ K +++ W+ + K+ N IF+ +L I+ L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLRKSGVGN---IFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 627 RIVRDPQTLKSTG 665
++V D K G
Sbjct: 129 KVVCDENGSKGYG 141
Score = 39.1 bits (87), Expect = 0.021
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VGDL P++ +L E F+P G I + R+ RD T +S G +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAY 56
Score = 32.3 bits (70), Expect = 2.4
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEF 409
+++ NLD S+ L F G++ CK++ E G+ Y F+ F
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHF 145
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 248 NMGDESHPK-TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
N S+P +LYVG+L P VTE L F G + ++ R+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRD 45
>BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 39.9 bits (89), Expect = 0.012
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN V+ K +++ W+ + K+ N IF+ +L I+ L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLRKSGVGN---IFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 627 RIVRDPQTLKSTG 665
++V D K G
Sbjct: 129 KVVCDENGSKGYG 141
Score = 39.1 bits (87), Expect = 0.021
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VGDL P++ +L E F+P G I + R+ RD T +S G +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAY 56
Score = 32.3 bits (70), Expect = 2.4
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEF 409
+++ NLD S+ L F G++ CK++ E G+ Y F+ F
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHF 145
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 248 NMGDESHPK-TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
N S+P +LYVG+L P VTE L F G + ++ R+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRD 45
>BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 39.9 bits (89), Expect = 0.012
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN V+ K +++ W+ + K+ N IF+ +L I+ L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLRKSGVGN---IFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 627 RIVRDPQTLKSTG 665
++V D K G
Sbjct: 129 KVVCDENGSKGYG 141
Score = 39.1 bits (87), Expect = 0.021
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VGDL P++ +L E F+P G I + R+ RD T +S G +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAY 56
Score = 32.3 bits (70), Expect = 2.4
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEF 409
+++ NLD S+ L F G++ CK++ E G+ Y F+ F
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHF 145
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 248 NMGDESHPK-TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
N S+P +LYVG+L P VTE L F G + ++ R+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRD 45
>BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein.
Length = 636
Score = 39.9 bits (89), Expect = 0.012
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN V+ K +++ W+ + K+ N IF+ +L I+ L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLRKSGVGN---IFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 627 RIVRDPQTLKSTG 665
++V D K G
Sbjct: 129 KVVCDENGSKGYG 141
Score = 39.1 bits (87), Expect = 0.021
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VGDL P++ +L E F+P G I + R+ RD T +S G +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAY 56
Score = 32.3 bits (70), Expect = 2.4
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEF 409
+++ NLD S+ L F G++ CK++ E G+ Y F+ F
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHF 145
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 248 NMGDESHPK-TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
N S+P +LYVG+L P VTE L F G + ++ R+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRD 45
>AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 39.9 bits (89), Expect = 0.012
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VGDL P++ +L E F+P G I + R+ RD T +S G +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAY 56
Score = 33.9 bits (74), Expect = 0.77
Identities = 17/73 (23%), Positives = 34/73 (46%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN ++ + +++ W+ K+ N IF+ +L I+ L + F+ FG I +C
Sbjct: 72 MNFEMLKGQPIRIMWSQRDPGLRKSGVGN---IFIKNLEDSIDNKALYDTFSTFGNILSC 128
Query: 627 RIVRDPQTLKSTG 665
++ D + G
Sbjct: 129 KVACDEHGSRGFG 141
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = +2
Query: 248 NMGDESHP-KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGND---PYAFLEF 409
N +P +LYVG+L P VTE L F G + ++ R+ YA++ F
Sbjct: 2 NASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINF 59
>AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 39.9 bits (89), Expect = 0.012
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VGDL P++ +L E F+P G I + R+ RD T +S G +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAY 56
Score = 33.9 bits (74), Expect = 0.77
Identities = 17/73 (23%), Positives = 34/73 (46%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN ++ + +++ W+ K+ N IF+ +L I+ L + F+ FG I +C
Sbjct: 72 MNFEMLKGQPIRIMWSQRDPGLRKSGVGN---IFIKNLEDSIDNKALYDTFSTFGNILSC 128
Query: 627 RIVRDPQTLKSTG 665
++ D + G
Sbjct: 129 KVACDEHGSRGFG 141
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = +2
Query: 248 NMGDESHP-KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGND---PYAFLEF 409
N +P +LYVG+L P VTE L F G + ++ R+ YA++ F
Sbjct: 2 NASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINF 59
>AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 39.9 bits (89), Expect = 0.012
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VGDL P++ +L E F+P G I + R+ RD T +S G +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAY 56
Score = 33.9 bits (74), Expect = 0.77
Identities = 17/73 (23%), Positives = 34/73 (46%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN ++ + +++ W+ K+ N IF+ +L I+ L + F+ FG I +C
Sbjct: 72 MNFEMLKGQPIRIMWSQRDPGLRKSGVGN---IFIKNLEDSIDNKALYDTFSTFGNILSC 128
Query: 627 RIVRDPQTLKSTG 665
++ D + G
Sbjct: 129 KVACDEHGSRGFG 141
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = +2
Query: 248 NMGDESHP-KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGND---PYAFLEF 409
N +P +LYVG+L P VTE L F G + ++ R+ YA++ F
Sbjct: 2 NASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINF 59
>AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 39.9 bits (89), Expect = 0.012
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VGDL P++ +L E F+P G I + R+ RD T +S G +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAY 56
Score = 33.9 bits (74), Expect = 0.77
Identities = 17/73 (23%), Positives = 34/73 (46%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN ++ + +++ W+ K+ N IF+ +L I+ L + F+ FG I +C
Sbjct: 72 MNFEMLKGQPIRIMWSQRDPGLRKSGVGN---IFIKNLEDSIDNKALYDTFSTFGNILSC 128
Query: 627 RIVRDPQTLKSTG 665
++ D + G
Sbjct: 129 KVACDEHGSRGFG 141
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = +2
Query: 248 NMGDESHP-KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGND---PYAFLEF 409
N +P +LYVG+L P VTE L F G + ++ R+ YA++ F
Sbjct: 2 NASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINF 59
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 39.5 bits (88), Expect = 0.016
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN V+ K +++ W+ + K+ N +F+ +L I+ +L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVGN---VFIKNLDKSIDNKVLYDTFSAFGNILSC 128
Query: 627 RIVRD 641
++V D
Sbjct: 129 KVVCD 133
Score = 35.5 bits (78), Expect = 0.25
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VGDL ++ +L E F+P G + + R+ RD T +S G +
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAY 56
Score = 33.9 bits (74), Expect = 0.77
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEF 409
+++ NLD S+ L F G++ CK++ E G+ YAF+ F
Sbjct: 101 VFIKNLDKSIDNKVLYDTFSAFGNILSCKVVCDENGSKGYAFVHF 145
Score = 31.9 bits (69), Expect = 3.1
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +3
Query: 540 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++++ + E++ L+E F+ FG+ + +++RDP KS G F
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNG-KSKGFGF 235
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 540 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTG-LCF 674
++++ +L I+ LR+ F+PFG I++ +++ + K G +CF
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCF 340
>BC105582-1|AAI05583.1| 173|Homo sapiens RBMX2 protein protein.
Length = 173
Score = 39.1 bits (87), Expect = 0.021
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IF+G L E+ + F+ +GEI N +VRD +T KS G CF
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCF 81
>BC033750-1|AAH33750.1| 322|Homo sapiens RNA binding motif protein,
X-linked 2 protein.
Length = 322
Score = 39.1 bits (87), Expect = 0.021
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IF+G L E+ + F+ +GEI N +VRD +T KS G CF
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCF 81
>BC003676-1|AAH03676.1| 163|Homo sapiens Unknown (protein for
IMAGE:3686686) protein.
Length = 163
Score = 39.1 bits (87), Expect = 0.021
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IF+G L E+ + F+ +GEI N +VRD +T KS G CF
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCF 81
>AL050405-1|CAB43745.1| 322|Homo sapiens hypothetical protein
protein.
Length = 322
Score = 39.1 bits (87), Expect = 0.021
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IF+G L E+ + F+ +GEI N +VRD +T KS G CF
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCF 81
>AL035423-8|CAI42444.1| 322|Homo sapiens RNA binding motif protein,
X-linked 2 protein.
Length = 322
Score = 39.1 bits (87), Expect = 0.021
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IF+G L E+ + F+ +GEI N +VRD +T KS G CF
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCF 81
>AF151837-1|AAD34074.1| 351|Homo sapiens CGI-79 protein protein.
Length = 351
Score = 39.1 bits (87), Expect = 0.021
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IF+G L E+ + F+ +GEI N +VRD +T KS G CF
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCF 81
>X79536-1|CAA56072.1| 320|Homo sapiens hnRNPcore protein A1
protein.
Length = 320
Score = 38.7 bits (86), Expect = 0.027
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+F+G LS E LR F +G +++C ++RDP T +S G F
Sbjct: 16 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGF 59
>X12671-1|CAA31191.1| 320|Homo sapiens hnrnp a1 protein protein.
Length = 320
Score = 38.7 bits (86), Expect = 0.027
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+F+G LS E LR F +G +++C ++RDP T +S G F
Sbjct: 16 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGF 59
>X06747-1|CAA29922.1| 320|Homo sapiens protein ( Human hnRNP core
protein A1. ).
Length = 320
Score = 38.7 bits (86), Expect = 0.027
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+F+G LS E LR F +G +++C ++RDP T +S G F
Sbjct: 16 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGF 59
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFVG + + E + LR+ F FG+I I+ D + K G F
Sbjct: 107 IFVGGIKEDTEEHHLRDYFEQFGKIEVIEIMTDRGSGKKKGFAF 150
>BC121133-1|AAI21134.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 38.7 bits (86), Expect = 0.027
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+F+G LS E LR F +G +++C ++RDP T +S G F
Sbjct: 16 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGF 59
>BC108266-1|AAI08267.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1-like protein.
Length = 320
Score = 38.7 bits (86), Expect = 0.027
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+F+G LS E LR F +G +++C ++RDP T +S G F
Sbjct: 16 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGF 59
>BC103707-1|AAI03708.1| 267|Homo sapiens HNRPA1 protein protein.
Length = 267
Score = 38.7 bits (86), Expect = 0.027
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+F+G LS E LR F +G +++C ++RDP T +S G F
Sbjct: 16 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGF 59
>BC074502-1|AAH74502.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 38.7 bits (86), Expect = 0.027
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+F+G LS E LR F +G +++C ++RDP T +S G F
Sbjct: 16 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGF 59
>BC073162-1|AAH73162.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 38.7 bits (86), Expect = 0.027
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+F+G LS E LR F +G +++C ++RDP T +S G F
Sbjct: 16 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGF 59
>BC071945-1|AAH71945.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 38.7 bits (86), Expect = 0.027
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+F+G LS E LR F +G +++C ++RDP T +S G F
Sbjct: 16 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGF 59
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFVG + + E + LR+ F FG+I I+ D + K G F
Sbjct: 107 IFVGGIKEDTEEHHLRDYFEQFGKIEVIEIMTDRGSGKKRGFAF 150
>BC070315-1|AAH70315.1| 320|Homo sapiens HNRPA1 protein protein.
Length = 320
Score = 38.7 bits (86), Expect = 0.027
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+F+G LS E LR F +G +++C ++RDP T +S G F
Sbjct: 16 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGF 59
>BC052296-1|AAH52296.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 38.7 bits (86), Expect = 0.027
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+F+G LS E LR F +G +++C ++RDP T +S G F
Sbjct: 16 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGF 59
>BC041956-1|AAH41956.1| 243|Homo sapiens LOC645974 protein protein.
Length = 243
Score = 38.7 bits (86), Expect = 0.027
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VGDL PE+ +L E F+P G I + I RD T +S G +
Sbjct: 47 LYVGDLHPEVTEAMLYEKFSPAGPILSISICRDKITRRSLGYAY 90
Score = 33.9 bits (74), Expect = 0.77
Identities = 17/73 (23%), Positives = 35/73 (47%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
+N V+ + +++ W+ + K+ N +F+ +L I+ L F+ FG I +C
Sbjct: 106 LNFDVIKGRPVRIMWSQRDPSLRKSGVGN---VFIKNLGKTIDNKALYNIFSAFGNILSC 162
Query: 627 RIVRDPQTLKSTG 665
++ D + K G
Sbjct: 163 KVACDEKGPKGYG 175
Score = 30.3 bits (65), Expect = 9.5
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 275 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 376
+LYVG+L P VTE L F G + I R+
Sbjct: 46 SLYVGDLHPEVTEAMLYEKFSPAGPILSISICRD 79
>BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 332
Score = 38.7 bits (86), Expect = 0.027
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFVG L+PE +RE F FGEI + DP+ K G F
Sbjct: 156 IFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVF 199
Score = 38.3 bits (85), Expect = 0.036
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+FVG LS + L++ F FGE+ +C I DP T +S G F +
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFIL 117
Score = 30.7 bits (66), Expect = 7.2
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 272 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP 379
K ++VG L+P TE + FG+ G+++ ++ +P
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDP 189
>BC033714-1|AAH33714.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 38.7 bits (86), Expect = 0.027
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+F+G LS E LR F +G +++C ++RDP T +S G F
Sbjct: 16 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGF 59
>BC012158-1|AAH12158.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 38.7 bits (86), Expect = 0.027
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+F+G LS E LR F +G +++C ++RDP T +S G F
Sbjct: 16 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGF 59
>BC009600-1|AAH09600.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 38.7 bits (86), Expect = 0.027
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+F+G LS E LR F +G +++C ++RDP T +S G F
Sbjct: 16 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGF 59
>BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 38.7 bits (86), Expect = 0.027
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFVG L+PE +RE F FGEI + DP+ K G F
Sbjct: 156 IFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVF 199
Score = 38.3 bits (85), Expect = 0.036
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+FVG LS + L++ F FGE+ +C I DP T +S G F +
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFIL 117
Score = 30.7 bits (66), Expect = 7.2
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 272 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP 379
K ++VG L+P TE + FG+ G+++ ++ +P
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDP 189
>BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 38.7 bits (86), Expect = 0.027
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFVG L+PE +RE F FGEI + DP+ K G F
Sbjct: 156 IFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVF 199
Score = 38.3 bits (85), Expect = 0.036
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+FVG LS + L++ F FGE+ +C I DP T +S G F +
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFIL 117
Score = 30.7 bits (66), Expect = 7.2
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 272 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP 379
K ++VG L+P TE + FG+ G+++ ++ +P
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDP 189
>BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 38.7 bits (86), Expect = 0.027
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFVG L+PE +RE F FGEI + DP+ K G F
Sbjct: 156 IFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVF 199
Score = 38.3 bits (85), Expect = 0.036
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+FVG LS + L++ F FGE+ +C I DP T +S G F +
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFIL 117
Score = 30.7 bits (66), Expect = 7.2
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 272 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP 379
K ++VG L+P TE + FG+ G+++ ++ +P
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDP 189
>BC002355-1|AAH02355.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 38.7 bits (86), Expect = 0.027
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+F+G LS E LR F +G +++C ++RDP T +S G F
Sbjct: 16 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGF 59
>BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 38.7 bits (86), Expect = 0.027
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFVG L+PE +RE F FGEI + DP+ K G F
Sbjct: 156 IFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVF 199
Score = 38.3 bits (85), Expect = 0.036
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+FVG LS + L++ F FGE+ +C I DP T +S G F +
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFIL 117
Score = 30.7 bits (66), Expect = 7.2
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 272 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP 379
K ++VG L+P TE + FG+ G+++ ++ +P
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDP 189
>AL137058-3|CAI16736.1| 320|Homo sapiens protein ( Human DNA
sequence from clone RP11-78J21 on chromosome
13q32.2-33.3 Contains 2 novel genes, a pseudogene
similar to part of TPTE and ).
Length = 320
Score = 38.7 bits (86), Expect = 0.027
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+F+G LS E LR F +G +++C ++RDP T +S G F
Sbjct: 16 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGF 59
>AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein AB isoform a variant protein.
Length = 332
Score = 38.7 bits (86), Expect = 0.027
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFVG L+PE +RE F FGEI + DP+ K G F
Sbjct: 156 IFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVF 199
Score = 38.3 bits (85), Expect = 0.036
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+FVG LS + L++ F FGE+ +C I DP T +S G F +
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFIL 117
Score = 30.7 bits (66), Expect = 7.2
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 272 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP 379
K ++VG L+P TE + FG+ G+++ ++ +P
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDP 189
>AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens
cDNA FLJ40338 fis, clone TESTI2032067, highly similar to
Rattus norvegicus mRNA for type A/B hnRNP protein p40.
).
Length = 332
Score = 38.7 bits (86), Expect = 0.027
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFVG L+PE +RE F FGEI + DP+ K G F
Sbjct: 156 IFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVF 199
Score = 38.3 bits (85), Expect = 0.036
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+FVG LS + L++ F FGE+ +C I DP T +S G F +
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFIL 117
Score = 30.7 bits (66), Expect = 7.2
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 272 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP 379
K ++VG L+P TE + FG+ G+++ ++ +P
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDP 189
>U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein.
Length = 331
Score = 38.3 bits (85), Expect = 0.036
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+FVG LS + L++ F FGE+ +C I DP T +S G F +
Sbjct: 70 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFIL 115
Score = 36.3 bits (80), Expect = 0.14
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 543 IFVGDLSPEIETNI-LREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFVG L+PE T +RE F FGEI + DP+ K G F
Sbjct: 154 IFVGGLNPESPTEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVF 198
>M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein
protein.
Length = 284
Score = 38.3 bits (85), Expect = 0.036
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXI 680
+FVG LS + L++ F FGE+ +C I DP T +S G F +
Sbjct: 70 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFIL 115
Score = 36.3 bits (80), Expect = 0.14
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 543 IFVGDLSPEIETNI-LREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IFVG L+PE T +RE F FGEI + DP+ K G F
Sbjct: 154 IFVGGLNPESPTEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVF 198
>BC066549-1|AAH66549.1| 474|Homo sapiens RNA binding motif protein
45 protein.
Length = 474
Score = 38.3 bits (85), Expect = 0.036
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +3
Query: 579 NILREAFAPFGEISNCRIVRDPQTLKSTGLCFXIIXKXSR 698
++LRE F+PFG+I + +VRD T +S G+ F + S+
Sbjct: 39 SVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQ 78
>BC037837-1|AAH37837.2| 248|Homo sapiens Unknown (protein for
MGC:42237) protein.
Length = 248
Score = 38.3 bits (85), Expect = 0.036
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +3
Query: 579 NILREAFAPFGEISNCRIVRDPQTLKSTGLCFXIIXKXSR 698
++LRE F+PFG+I + +VRD T +S G+ F + S+
Sbjct: 39 SVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQ 78
>BC024208-1|AAH24208.1| 423|Homo sapiens RNA binding motif protein
23 protein.
Length = 423
Score = 38.3 bits (85), Expect = 0.036
Identities = 24/86 (27%), Positives = 39/86 (45%)
Frame = +3
Query: 459 VVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 638
+V + + N + N + ++VG L I ++LR F PFG+I N +++
Sbjct: 221 IVQASQAEKNRLAAMANNLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMK 280
Query: 639 DPQTLKSTGLCFXIIXKXSRCPXPAI 716
D T +S G F I S C A+
Sbjct: 281 DSDTGRSKGYGF-ITFSDSECARRAL 305
>BC002566-1|AAH02566.1| 424|Homo sapiens RNA binding motif protein
23 protein.
Length = 424
Score = 38.3 bits (85), Expect = 0.036
Identities = 24/86 (27%), Positives = 39/86 (45%)
Frame = +3
Query: 459 VVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 638
+V + + N + N + ++VG L I ++LR F PFG+I N +++
Sbjct: 221 IVQASQAEKNRLAAMANNLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMK 280
Query: 639 DPQTLKSTGLCFXIIXKXSRCPXPAI 716
D T +S G F I S C A+
Sbjct: 281 DSDTGRSKGYGF-ITFSDSECARRAL 305
>AK001344-1|BAA91638.1| 406|Homo sapiens protein ( Homo sapiens
cDNA FLJ10482 fis, clone NT2RP2000153, weakly similar to
GAR2 PROTEIN. ).
Length = 406
Score = 38.3 bits (85), Expect = 0.036
Identities = 24/86 (27%), Positives = 39/86 (45%)
Frame = +3
Query: 459 VVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 638
+V + + N + N + ++VG L I ++LR F PFG+I N +++
Sbjct: 203 IVQASQAEKNRLAAMANNLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMK 262
Query: 639 DPQTLKSTGLCFXIIXKXSRCPXPAI 716
D T +S G F I S C A+
Sbjct: 263 DSDTGRSKGYGF-ITFSDSECARRAL 287
>AF526533-1|AAM88417.1| 328|Homo sapiens putative RNA binding
protein RB-1 protein.
Length = 328
Score = 38.3 bits (85), Expect = 0.036
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +3
Query: 579 NILREAFAPFGEISNCRIVRDPQTLKSTGLCFXIIXKXSR 698
++LRE F+PFG+I + +VRD T +S G+ F + S+
Sbjct: 39 SVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQ 78
>AF275678-1|AAG24388.1| 418|Homo sapiens PP239 protein protein.
Length = 418
Score = 38.3 bits (85), Expect = 0.036
Identities = 24/86 (27%), Positives = 39/86 (45%)
Frame = +3
Query: 459 VVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 638
+V + + N + N + ++VG L I ++LR F PFG+I N +++
Sbjct: 215 IVQASQAEKNRLAAMANNLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMK 274
Query: 639 DPQTLKSTGLCFXIIXKXSRCPXPAI 716
D T +S G F I S C A+
Sbjct: 275 DSDTGRSKGYGF-ITFSDSECARRAL 299
>AB036991-1|BAC16207.1| 476|Homo sapiens developmentally regulated
RNA-binding protein 1 protein.
Length = 476
Score = 38.3 bits (85), Expect = 0.036
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +3
Query: 579 NILREAFAPFGEISNCRIVRDPQTLKSTGLCFXIIXKXSR 698
++LRE F+PFG+I + +VRD T +S G+ F + S+
Sbjct: 39 SVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQ 78
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 37.9 bits (84), Expect = 0.047
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN V+ K +++ W+ + K+ N +F+ +L I+ L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVGN---VFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 627 RIVRD 641
++V D
Sbjct: 129 KVVCD 133
Score = 35.5 bits (78), Expect = 0.25
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VGDL ++ +L E F+P G + + R+ RD T +S G +
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAY 56
Score = 33.5 bits (73), Expect = 1.0
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEF 409
+++ NLD S+ L F G++ CK++ E G+ YAF+ F
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHF 145
Score = 31.9 bits (69), Expect = 3.1
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +3
Query: 540 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++++ + E++ L+E F+ FG+ + +++RDP KS G F
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNG-KSKGFGF 235
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 540 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTG-LCF 674
++++ +L I+ LR+ F+PFG I++ +++ + K G +CF
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCF 340
>U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein
protein.
Length = 326
Score = 37.9 bits (84), Expect = 0.047
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IF+ +L + + IL + F PFG ++N +++RD T K G F
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 289
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 37.9 bits (84), Expect = 0.047
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN V+ K +++ W+ + K+ N +F+ +L I+ L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVGN---VFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 627 RIVRD 641
++V D
Sbjct: 129 KVVCD 133
Score = 35.5 bits (78), Expect = 0.25
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VGDL ++ +L E F+P G + + R+ RD T +S G +
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAY 56
Score = 33.5 bits (73), Expect = 1.0
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEF 409
+++ NLD S+ L F G++ CK++ E G+ YAF+ F
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHF 145
Score = 31.9 bits (69), Expect = 3.1
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +3
Query: 540 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++++ + E++ L+E F+ FG+ + +++RDP KS G F
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNG-KSKGFGF 235
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 540 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTG-LCF 674
++++ +L I+ LR+ F+PFG I++ +++ + K G +CF
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCF 340
>BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 1 (Hu antigen R)
protein.
Length = 326
Score = 37.9 bits (84), Expect = 0.047
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IF+ +L + + IL + F PFG ++N +++RD T K G F
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 289
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 37.9 bits (84), Expect = 0.047
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN V+ K +++ W+ + K+ N +F+ +L I+ L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVGN---VFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 627 RIVRD 641
++V D
Sbjct: 129 KVVCD 133
Score = 35.5 bits (78), Expect = 0.25
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VGDL ++ +L E F+P G + + R+ RD T +S G +
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAY 56
Score = 33.5 bits (73), Expect = 1.0
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEF 409
+++ NLD S+ L F G++ CK++ E G+ YAF+ F
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHF 145
Score = 31.9 bits (69), Expect = 3.1
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +3
Query: 540 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++++ + E++ L+E F+ FG+ + +++RDP KS G F
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNG-KSKGFGF 235
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 540 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTG-LCF 674
++++ +L I+ LR+ F+PFG I++ +++ + K G +CF
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCF 340
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 37.9 bits (84), Expect = 0.047
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN V+ K +++ W+ + K+ N +F+ +L I+ L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVGN---VFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 627 RIVRD 641
++V D
Sbjct: 129 KVVCD 133
Score = 35.5 bits (78), Expect = 0.25
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VGDL ++ +L E F+P G + + R+ RD T +S G +
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAY 56
Score = 33.5 bits (73), Expect = 1.0
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEF 409
+++ NLD S+ L F G++ CK++ E G+ YAF+ F
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHF 145
Score = 31.9 bits (69), Expect = 3.1
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +3
Query: 540 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++++ + E++ L+E F+ FG+ + +++RDP KS G F
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNG-KSKGFGF 235
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 540 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTG-LCF 674
++++ +L I+ LR+ F+PFG I++ +++ + K G +CF
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCF 340
>BC070262-1|AAH70262.1| 266|Homo sapiens RNA binding motif protein
7 protein.
Length = 266
Score = 37.9 bits (84), Expect = 0.047
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +2
Query: 272 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP--YAFLEF 409
+TL+VGNL+ VTE L LF Q G V KI ++ P +AF+ F
Sbjct: 10 RTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKPKQFAFVNF 57
>BC034381-1|AAH34381.1| 266|Homo sapiens RNA binding motif protein
7 protein.
Length = 266
Score = 37.9 bits (84), Expect = 0.047
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +2
Query: 272 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP--YAFLEF 409
+TL+VGNL+ VTE L LF Q G V KI ++ P +AF+ F
Sbjct: 10 RTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKPKQFAFVNF 57
>BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 1 (Hu antigen R)
protein.
Length = 326
Score = 37.9 bits (84), Expect = 0.047
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IF+ +L + + IL + F PFG ++N +++RD T K G F
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 289
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 37.9 bits (84), Expect = 0.047
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN V+ K +++ W+ + K+ N +F+ +L I+ L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVGN---VFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 627 RIVRD 641
++V D
Sbjct: 129 KVVCD 133
Score = 35.5 bits (78), Expect = 0.25
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VGDL ++ +L E F+P G + + R+ RD T +S G +
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAY 56
Score = 33.5 bits (73), Expect = 1.0
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEF 409
+++ NLD S+ L F G++ CK++ E G+ YAF+ F
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHF 145
Score = 31.9 bits (69), Expect = 3.1
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +3
Query: 540 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++++ + E++ L+E F+ FG+ + +++RDP KS G F
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNG-KSKGFGF 235
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 540 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTG-LCF 674
++++ +L I+ LR+ F+PFG I++ +++ + K G +CF
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCF 340
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 37.9 bits (84), Expect = 0.047
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN V+ K +++ W+ + K+ N +F+ +L I+ L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVGN---VFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 627 RIVRD 641
++V D
Sbjct: 129 KVVCD 133
Score = 35.5 bits (78), Expect = 0.25
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VGDL ++ +L E F+P G + + R+ RD T +S G +
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAY 56
Score = 33.5 bits (73), Expect = 1.0
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEF 409
+++ NLD S+ L F G++ CK++ E G+ YAF+ F
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHF 145
Score = 31.9 bits (69), Expect = 3.1
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +3
Query: 540 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++++ + E++ L+E F+ FG+ + +++RDP KS G F
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNG-KSKGFGF 235
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 540 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTG-LCF 674
++++ +L I+ LR+ F+PFG I++ +++ + K G +CF
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCF 340
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 37.9 bits (84), Expect = 0.047
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN V+ K +++ W+ + K+ N +F+ +L I+ L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVGN---VFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 627 RIVRD 641
++V D
Sbjct: 129 KVVCD 133
Score = 35.5 bits (78), Expect = 0.25
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VGDL ++ +L E F+P G + + R+ RD T +S G +
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAY 56
Score = 33.5 bits (73), Expect = 1.0
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEF 409
+++ NLD S+ L F G++ CK++ E G+ YAF+ F
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHF 145
Score = 31.9 bits (69), Expect = 3.1
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +3
Query: 540 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++++ + E++ L+E F+ FG+ + +++RDP KS G F
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNG-KSKGFGF 235
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 540 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTG-LCF 674
++++ +L I+ LR+ F+PFG I++ +++ + K G +CF
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCF 340
>AL450998-14|CAH70862.1| 296|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 296
Score = 37.9 bits (84), Expect = 0.047
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +2
Query: 257 DESHPK---TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEF 409
DE HPK TL++GNL+ + T L +F + G++ I + G YAFL++
Sbjct: 169 DEFHPKATRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQY 222
>AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 3664
Score = 37.9 bits (84), Expect = 0.047
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +2
Query: 257 DESHPK---TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEF 409
DE HPK TL++GNL+ + T L +F + G++ I + G YAFL++
Sbjct: 430 DEFHPKATRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQY 483
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 37.9 bits (84), Expect = 0.047
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN V+ K +++ W+ + K+ N +F+ +L I+ L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVGN---VFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 627 RIVRD 641
++V D
Sbjct: 129 KVVCD 133
Score = 35.5 bits (78), Expect = 0.25
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VGDL ++ +L E F+P G + + R+ RD T +S G +
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAY 56
Score = 33.5 bits (73), Expect = 1.0
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEF 409
+++ NLD S+ L F G++ CK++ E G+ YAF+ F
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHF 145
Score = 31.9 bits (69), Expect = 3.1
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +3
Query: 540 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++++ + E++ L+E F+ FG+ + +++RDP KS G F
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNG-KSKGFGF 235
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 540 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTG-LCF 674
++++ +L I+ LR+ F+PFG I++ +++ + K G +CF
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCF 340
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 37.9 bits (84), Expect = 0.047
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN V+ K +++ W+ + K+ N +F+ +L I+ L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVGN---VFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 627 RIVRD 641
++V D
Sbjct: 129 KVVCD 133
Score = 35.5 bits (78), Expect = 0.25
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VGDL ++ +L E F+P G + + R+ RD T +S G +
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAY 56
Score = 33.5 bits (73), Expect = 1.0
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEF 409
+++ NLD S+ L F G++ CK++ E G+ YAF+ F
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHF 145
Score = 31.9 bits (69), Expect = 3.1
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +3
Query: 540 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++++ + E++ L+E F+ FG+ + +++RDP KS G F
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNG-KSKGFGF 235
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 540 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTG-LCF 674
++++ +L I+ LR+ F+PFG I++ +++ + K G +CF
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCF 340
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 37.9 bits (84), Expect = 0.047
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN V+ K +++ W+ + K+ N +F+ +L I+ L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVGN---VFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 627 RIVRD 641
++V D
Sbjct: 129 KVVCD 133
Score = 35.5 bits (78), Expect = 0.25
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VGDL ++ +L E F+P G + + R+ RD T +S G +
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAY 56
Score = 33.5 bits (73), Expect = 1.0
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEF 409
+++ NLD S+ L F G++ CK++ E G+ YAF+ F
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHF 145
Score = 31.9 bits (69), Expect = 3.1
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +3
Query: 540 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++++ + E++ L+E F+ FG+ + +++RDP KS G F
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNG-KSKGFGF 235
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 540 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTG-LCF 674
++++ +L I+ LR+ F+PFG I++ +++ + K G +CF
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCF 340
>AL096858-1|CAB51072.1| 3261|Homo sapiens hypothetical protein
protein.
Length = 3261
Score = 37.9 bits (84), Expect = 0.047
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +2
Query: 257 DESHPK---TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEF 409
DE HPK TL++GNL+ + T L +F + G++ I + G YAFL++
Sbjct: 27 DEFHPKATRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQY 80
>AL034555-6|CAI19528.1| 296|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 296
Score = 37.9 bits (84), Expect = 0.047
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +2
Query: 257 DESHPK---TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEF 409
DE HPK TL++GNL+ + T L +F + G++ I + G YAFL++
Sbjct: 169 DEFHPKATRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQY 222
>AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 3664
Score = 37.9 bits (84), Expect = 0.047
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +2
Query: 257 DESHPK---TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEF 409
DE HPK TL++GNL+ + T L +F + G++ I + G YAFL++
Sbjct: 430 DEFHPKATRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQY 483
>AK002015-1|BAA92036.1| 267|Homo sapiens protein ( Homo sapiens
cDNA FLJ11153 fis, clone PLACE1006917, weakly similar to
HSH49 PROTEIN. ).
Length = 267
Score = 37.9 bits (84), Expect = 0.047
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +2
Query: 272 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP--YAFLEF 409
+TL+VGNL+ VTE L LF Q G V KI ++ P +AF+ F
Sbjct: 10 RTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKPKQFAFVNF 57
>AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor
transcription cofactor protein.
Length = 3664
Score = 37.9 bits (84), Expect = 0.047
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +2
Query: 257 DESHPK---TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEF 409
DE HPK TL++GNL+ + T L +F + G++ I + G YAFL++
Sbjct: 430 DEFHPKATRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQY 483
>AF156098-1|AAD39257.1| 266|Homo sapiens RNA binding motif protein
7 protein.
Length = 266
Score = 37.9 bits (84), Expect = 0.047
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +2
Query: 272 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP--YAFLEF 409
+TL+VGNL+ VTE L LF Q G V KI ++ P +AF+ F
Sbjct: 10 RTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKPKQFAFVNF 57
>AB210019-1|BAE06101.1| 544|Homo sapiens CUGBP1 variant protein
protein.
Length = 544
Score = 37.9 bits (84), Expect = 0.047
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +3
Query: 501 PXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
P + K + + +F+G +S + N +R F+ FG+I CRI+R P L S G F
Sbjct: 155 PADSEKNNVEDRK-LFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGL-SRGCAF 210
>AB209753-1|BAD92990.1| 155|Homo sapiens Hypothetical protein
FLJ11153 variant protein.
Length = 155
Score = 37.9 bits (84), Expect = 0.047
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +2
Query: 272 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP--YAFLEF 409
+TL+VGNL+ VTE L LF Q G V KI ++ P +AF+ F
Sbjct: 16 RTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKPKQFAFVNF 63
>AF087905-1|AAP97203.1| 425|Homo sapiens splicing factor SF2
protein.
Length = 425
Score = 37.5 bits (83), Expect = 0.063
Identities = 23/81 (28%), Positives = 37/81 (45%)
Frame = +3
Query: 459 VVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 638
+V + + N + N + ++VG L I ++LR F PFG+I N +++
Sbjct: 221 IVQASQAEKNRLAAMANNLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMK 280
Query: 639 DPQTLKSTGLCFXIIXKXSRC 701
D T +S G F I S C
Sbjct: 281 DSDTGRSKGYGF-ITFSDSEC 300
>DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein.
Length = 630
Score = 37.1 bits (82), Expect = 0.083
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 513 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
P T + ++VGDL P++ +L E F+P G I + RI RD T S+ +
Sbjct: 3 PSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAY 56
Score = 36.7 bits (81), Expect = 0.11
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +2
Query: 248 NMGDESHPK-TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE---PGNDPYAFLEFTC 415
N S+P +LYVG+L P VTE L F G + +I R+ G+ YA++ F
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQ- 60
Query: 416 HT 421
HT
Sbjct: 61 HT 62
Score = 35.9 bits (79), Expect = 0.19
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN V+ K +++ W+ + K+ N IFV +L I L + + FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLRKSGVGN---IFVKNLDKSINNKALYDTVSAFGNILSC 128
Query: 627 RIVRDPQTLKSTG 665
+V D K G
Sbjct: 129 NVVCDENGSKGYG 141
Score = 30.7 bits (66), Expect = 7.2
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEFTCH 418
++V NLD S+ L G++ C ++ E G+ Y F+ F H
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETH 148
>BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 37.1 bits (82), Expect = 0.083
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTG 665
++VGDL P++ ++L + F P G + RI RDP T G
Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLG 60
Score = 34.3 bits (75), Expect = 0.58
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +2
Query: 230 DRLR*ANMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLE 406
DRLR + +G+ +++ NLD S+ L LF G++ CK++ + G+ YA++
Sbjct: 98 DRLRKSGVGN------IFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNGSKGYAYVH 151
Query: 407 F 409
F
Sbjct: 152 F 152
Score = 33.9 bits (74), Expect = 0.77
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP 379
LYVG+LDP VTE L F G ++ +I R+P
Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDP 53
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN ++ K ++ W+ K+ N IF+ +L I+ L F+ FG I +C
Sbjct: 79 MNFDLINGKPFRLMWSQPDDRLRKSGVGN---IFIKNLDKSIDNRALFYLFSAFGNILSC 135
Query: 627 RIVRD 641
++V D
Sbjct: 136 KVVCD 140
Score = 30.3 bits (65), Expect = 9.5
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +3
Query: 522 DTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
D + ++FV ++ +I+ L+E F +G + +++RD KS G F
Sbjct: 194 DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASG-KSKGFGF 243
>BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 37.1 bits (82), Expect = 0.083
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 513 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
P T + ++VGDL P++ +L E F+P G I + RI RD T S+ +
Sbjct: 3 PSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAY 56
Score = 36.7 bits (81), Expect = 0.11
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +2
Query: 248 NMGDESHPK-TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE---PGNDPYAFLEFTC 415
N S+P +LYVG+L P VTE L F G + +I R+ G+ YA++ F
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQ- 60
Query: 416 HT 421
HT
Sbjct: 61 HT 62
Score = 35.9 bits (79), Expect = 0.19
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN V+ K +++ W+ + K+ N IFV +L I L + + FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLRKSGVGN---IFVKNLDKSINNKALYDTVSAFGNILSC 128
Query: 627 RIVRDPQTLKSTG 665
+V D K G
Sbjct: 129 NVVCDENGSKGYG 141
Score = 30.7 bits (66), Expect = 7.2
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEFTCH 418
++V NLD S+ L G++ C ++ E G+ Y F+ F H
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETH 148
>BC031682-1|AAH31682.1| 450|Homo sapiens RBM42 protein protein.
Length = 450
Score = 37.1 bits (82), Expect = 0.083
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IF GDL E+ +IL AF+ F +++RD +T K+ G F
Sbjct: 353 IFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGF 396
>BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 37.1 bits (82), Expect = 0.083
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 513 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
P T + ++VGDL P++ +L E F+P G I + RI RD T S+ +
Sbjct: 3 PSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAY 56
Score = 36.7 bits (81), Expect = 0.11
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +2
Query: 248 NMGDESHPK-TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE---PGNDPYAFLEFTC 415
N S+P +LYVG+L P VTE L F G + +I R+ G+ YA++ F
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQ- 60
Query: 416 HT 421
HT
Sbjct: 61 HT 62
Score = 35.9 bits (79), Expect = 0.19
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN V+ K +++ W+ + K+ N IFV +L I L + + FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLRKSGVGN---IFVKNLDKSINNKALYDTVSAFGNILSC 128
Query: 627 RIVRDPQTLKSTG 665
+V D K G
Sbjct: 129 NVVCDENGSKGYG 141
Score = 30.7 bits (66), Expect = 7.2
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEFTCH 418
++V NLD S+ L G++ C ++ E G+ Y F+ F H
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETH 148
>BC004204-1|AAH04204.1| 480|Homo sapiens hypothetical protein
MGC10433 protein.
Length = 480
Score = 37.1 bits (82), Expect = 0.083
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IF GDL E+ +IL AF+ F +++RD +T K+ G F
Sbjct: 383 IFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGF 426
>BC002868-1|AAH02868.1| 451|Homo sapiens MGC10433 protein protein.
Length = 451
Score = 37.1 bits (82), Expect = 0.083
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IF GDL E+ +IL AF+ F +++RD +T K+ G F
Sbjct: 354 IFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGF 397
>AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 37.1 bits (82), Expect = 0.083
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTG 665
++VGDL P++ ++L + F P G + RI RDP T G
Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLG 60
Score = 34.3 bits (75), Expect = 0.58
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +2
Query: 230 DRLR*ANMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLE 406
DRLR + +G+ +++ NLD S+ L LF G++ CK++ + G+ YA++
Sbjct: 98 DRLRKSGVGN------IFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNGSKGYAYVH 151
Query: 407 F 409
F
Sbjct: 152 F 152
Score = 33.9 bits (74), Expect = 0.77
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP 379
LYVG+LDP VTE L F G ++ +I R+P
Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDP 53
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN ++ K ++ W+ K+ N IF+ +L I+ L F+ FG I +C
Sbjct: 79 MNFDLINGKPFRLMWSQPDDRLRKSGVGN---IFIKNLDKSIDNRALFYLFSAFGNILSC 135
Query: 627 RIVRD 641
++V D
Sbjct: 136 KVVCD 140
Score = 30.3 bits (65), Expect = 9.5
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +3
Query: 522 DTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
D + ++FV ++ +I+ L+E F +G + +++RD KS G F
Sbjct: 194 DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASG-KSKGFGF 243
>AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 37.1 bits (82), Expect = 0.083
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 513 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
P T + ++VGDL P++ +L E F+P G I + RI RD T S+ +
Sbjct: 3 PSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAY 56
Score = 36.7 bits (81), Expect = 0.11
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +2
Query: 248 NMGDESHPK-TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE---PGNDPYAFLEFTC 415
N S+P +LYVG+L P VTE L F G + +I R+ G+ YA++ F
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQ- 60
Query: 416 HT 421
HT
Sbjct: 61 HT 62
Score = 35.9 bits (79), Expect = 0.19
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN V+ K +++ W+ + K+ N IFV +L I L + + FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLRKSGVGN---IFVKNLDKSINNKALYDTVSAFGNILSC 128
Query: 627 RIVRDPQTLKSTG 665
+V D K G
Sbjct: 129 NVVCDENGSKGYG 141
Score = 30.7 bits (66), Expect = 7.2
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEFTCH 418
++V NLD S+ L G++ C ++ E G+ Y F+ F H
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETH 148
>AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein
protein.
Length = 367
Score = 37.1 bits (82), Expect = 0.083
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTG 665
++VGDL P++ ++L + F P G + RI RDP T G
Sbjct: 5 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLG 45
Score = 34.3 bits (75), Expect = 0.58
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +2
Query: 230 DRLR*ANMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLE 406
DRLR + +G+ +++ NLD S+ L LF G++ CK++ + G+ YA++
Sbjct: 83 DRLRKSGVGN------IFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNGSKGYAYVH 136
Query: 407 F 409
F
Sbjct: 137 F 137
Score = 33.9 bits (74), Expect = 0.77
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP 379
LYVG+LDP VTE L F G ++ +I R+P
Sbjct: 5 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDP 38
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN ++ K ++ W+ K+ N IF+ +L I+ L F+ FG I +C
Sbjct: 64 MNFDLINGKPFRLMWSQPDDRLRKSGVGN---IFIKNLDKSIDNRALFYLFSAFGNILSC 120
Query: 627 RIVRD 641
++V D
Sbjct: 121 KVVCD 125
Score = 30.3 bits (65), Expect = 9.5
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +3
Query: 522 DTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
D + ++FV ++ +I+ L+E F +G + +++RD KS G F
Sbjct: 179 DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASG-KSKGFGF 228
>AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif protein
28 variant protein.
Length = 759
Score = 37.1 bits (82), Expect = 0.083
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +2
Query: 275 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGN 385
TL+VG L PS L LF Q+G VK C ++ E G+
Sbjct: 5 TLFVGRLPPSARSEQLGELFSQVGPVKQCFVVTEKGS 41
Score = 33.9 bits (74), Expect = 0.77
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = +3
Query: 519 TDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXII---XK 689
+D + +F+ +LS + E L E FGE+ RIV P T S G F
Sbjct: 329 SDVNEGKTVFIRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEA 388
Query: 690 XSRCPXPAIPXNE 728
+C A P NE
Sbjct: 389 AQKCLLAASPENE 401
>AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein
cytoplasmic 5 protein.
Length = 382
Score = 37.1 bits (82), Expect = 0.083
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTG 665
++VGDL P++ ++L + F P G + RI RDP T G
Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLG 60
Score = 34.3 bits (75), Expect = 0.58
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +2
Query: 230 DRLR*ANMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLE 406
DRLR + +G+ +++ NLD S+ L LF G++ CK++ + G+ YA++
Sbjct: 98 DRLRKSGVGN------IFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNGSKGYAYVH 151
Query: 407 F 409
F
Sbjct: 152 F 152
Score = 33.9 bits (74), Expect = 0.77
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP 379
LYVG+LDP VTE L F G ++ +I R+P
Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDP 53
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN ++ K ++ W+ K+ N IF+ +L I+ L F+ FG I +C
Sbjct: 79 MNFDLINGKPFRLMWSQPDDRLRKSGVGN---IFIKNLDKSIDNRALFYLFSAFGNILSC 135
Query: 627 RIVRD 641
++V D
Sbjct: 136 KVVCD 140
Score = 30.3 bits (65), Expect = 9.5
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +3
Query: 522 DTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
D + ++FV ++ +I+ L+E F +G + +++RD KS G F
Sbjct: 194 DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASG-KSKGFGF 243
>AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific
poly(A)-binding protein protein.
Length = 631
Score = 37.1 bits (82), Expect = 0.083
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 513 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
P T + ++VGDL P++ +L E F+P G I + RI RD T S+ +
Sbjct: 3 PSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAY 56
Score = 36.7 bits (81), Expect = 0.11
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +2
Query: 248 NMGDESHPK-TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE---PGNDPYAFLEFTC 415
N S+P +LYVG+L P VTE L F G + +I R+ G+ YA++ F
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQ- 60
Query: 416 HT 421
HT
Sbjct: 61 HT 62
Score = 35.9 bits (79), Expect = 0.19
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN V+ K +++ W+ + K+ N IFV +L I L + + FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLRKSGVGN---IFVKNLDKSINNKALYDTVSAFGNILSC 128
Query: 627 RIVRDPQTLKSTG 665
+V D K G
Sbjct: 129 NVVCDENGSKGYG 141
Score = 30.7 bits (66), Expect = 7.2
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 278 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKII-REPGNDPYAFLEFTCH 418
++V NLD S+ L G++ C ++ E G+ Y F+ F H
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETH 148
>AC002115-1|AAB57629.1| 339|Homo sapiens F25451_2 protein.
Length = 339
Score = 37.1 bits (82), Expect = 0.083
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
IF GDL E+ +IL AF+ F +++RD +T K+ G F
Sbjct: 242 IFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGF 285
>U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1
protein.
Length = 541
Score = 36.7 bits (81), Expect = 0.11
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VG + E+ + +R+AFAPFG I + + D T+K G F
Sbjct: 113 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAF 156
Score = 35.5 bits (78), Expect = 0.25
Identities = 16/74 (21%), Positives = 34/74 (45%)
Frame = +3
Query: 453 KRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRI 632
+ + + + + A +Q + + I+V + ++ + ++ F FG+I +C +
Sbjct: 180 RNIKVGRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTL 239
Query: 633 VRDPQTLKSTGLCF 674
RDP T K G F
Sbjct: 240 ARDPTTGKHKGYGF 253
>CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein.
Length = 559
Score = 36.7 bits (81), Expect = 0.11
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VG + E+ + +R+AFAPFG I + + D T+K G F
Sbjct: 131 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAF 174
Score = 35.5 bits (78), Expect = 0.25
Identities = 16/74 (21%), Positives = 34/74 (45%)
Frame = +3
Query: 453 KRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRI 632
+ + + + + A +Q + + I+V + ++ + ++ F FG+I +C +
Sbjct: 198 RNIKVGRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTL 257
Query: 633 VRDPQTLKSTGLCF 674
RDP T K G F
Sbjct: 258 ARDPTTGKHKGYGF 271
>BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif protein
28 protein.
Length = 759
Score = 36.7 bits (81), Expect = 0.11
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +2
Query: 275 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGN 385
TL+VG L PS L LF Q+G VK C ++ E G+
Sbjct: 5 TLFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGS 41
Score = 33.9 bits (74), Expect = 0.77
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = +3
Query: 519 TDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXII---XK 689
+D + +F+ +LS + E L E FGE+ RIV P T S G F
Sbjct: 329 SDVNEGKTVFIRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEA 388
Query: 690 XSRCPXPAIPXNE 728
+C A P NE
Sbjct: 389 AQKCLLAASPENE 401
>BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 36.7 bits (81), Expect = 0.11
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VG + E+ + +R+AFAPFG I + + D T+K G F
Sbjct: 88 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAF 131
Score = 35.5 bits (78), Expect = 0.25
Identities = 16/74 (21%), Positives = 34/74 (45%)
Frame = +3
Query: 453 KRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRI 632
+ + + + + A +Q + + I+V + ++ + ++ F FG+I +C +
Sbjct: 155 RNIKVGRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTL 214
Query: 633 VRDPQTLKSTGLCF 674
RDP T K G F
Sbjct: 215 ARDPTTGKHKGYGF 228
>BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 36.7 bits (81), Expect = 0.11
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VG + E+ + +R+AFAPFG I + + D T+K G F
Sbjct: 88 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAF 131
Score = 35.5 bits (78), Expect = 0.25
Identities = 16/74 (21%), Positives = 34/74 (45%)
Frame = +3
Query: 453 KRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRI 632
+ + + + + A +Q + + I+V + ++ + ++ F FG+I +C +
Sbjct: 155 RNIKVGRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTL 214
Query: 633 VRDPQTLKSTGLCF 674
RDP T K G F
Sbjct: 215 ARDPTTGKHKGYGF 228
>BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein.
Length = 499
Score = 36.7 bits (81), Expect = 0.11
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VG + E+ + +R+AFAPFG I + + D T+K G F
Sbjct: 71 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAF 114
Score = 35.5 bits (78), Expect = 0.25
Identities = 16/74 (21%), Positives = 34/74 (45%)
Frame = +3
Query: 453 KRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRI 632
+ + + + + A +Q + + I+V + ++ + ++ F FG+I +C +
Sbjct: 138 RNIKVGRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTL 197
Query: 633 VRDPQTLKSTGLCF 674
RDP T K G F
Sbjct: 198 ARDPTTGKHKGYGF 211
>BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding
protein-interacting repressor protein.
Length = 542
Score = 36.7 bits (81), Expect = 0.11
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VG + E+ + +R+AFAPFG I + + D T+K G F
Sbjct: 114 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAF 157
Score = 35.5 bits (78), Expect = 0.25
Identities = 16/74 (21%), Positives = 34/74 (45%)
Frame = +3
Query: 453 KRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRI 632
+ + + + + A +Q + + I+V + ++ + ++ F FG+I +C +
Sbjct: 181 RNIKVGRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTL 240
Query: 633 VRDPQTLKSTGLCF 674
RDP T K G F
Sbjct: 241 ARDPTTGKHKGYGF 254
>AL049824-3|CAI19349.1| 171|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 171
Score = 36.7 bits (81), Expect = 0.11
Identities = 15/39 (38%), Positives = 27/39 (69%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKS 659
++VG L+ E++ +L AF PFG+I++ +I D +T+ S
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETVWS 46
>AL035404-7|CAI19578.1| 171|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 171
Score = 36.7 bits (81), Expect = 0.11
Identities = 15/39 (38%), Positives = 27/39 (69%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKS 659
++VG L+ E++ +L AF PFG+I++ +I D +T+ S
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETVWS 46
>AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens
cDNA FLJ10377 fis, clone NT2RM2001989, weakly similar to
NUCLEOLAR PROTEIN NOP4. ).
Length = 759
Score = 36.7 bits (81), Expect = 0.11
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +2
Query: 275 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGN 385
TL+VG L PS L LF Q+G VK C ++ E G+
Sbjct: 5 TLFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGS 41
Score = 33.9 bits (74), Expect = 0.77
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = +3
Query: 519 TDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCFXII---XK 689
+D + +F+ +LS + E L E FGE+ RIV P T S G F
Sbjct: 329 SDVNEGKTVFIRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEA 388
Query: 690 XSRCPXPAIPXNE 728
+C A P NE
Sbjct: 389 AQKCLLAASPENE 401
>AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repressor
protein.
Length = 542
Score = 36.7 bits (81), Expect = 0.11
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VG + E+ + +R+AFAPFG I + + D T+K G F
Sbjct: 114 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAF 157
Score = 35.5 bits (78), Expect = 0.25
Identities = 16/74 (21%), Positives = 34/74 (45%)
Frame = +3
Query: 453 KRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRI 632
+ + + + + A +Q + + I+V + ++ + ++ F FG+I +C +
Sbjct: 181 RNIKVGRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTL 240
Query: 633 VRDPQTLKSTGLCF 674
RDP T K G F
Sbjct: 241 ARDPTTGKHKGYGF 254
>AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing
factor PUF60 protein.
Length = 556
Score = 36.7 bits (81), Expect = 0.11
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VG + E+ + +R+AFAPFG I + + D T+K G F
Sbjct: 128 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAF 171
Score = 35.5 bits (78), Expect = 0.25
Identities = 16/74 (21%), Positives = 34/74 (45%)
Frame = +3
Query: 453 KRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRI 632
+ + + + + A +Q + + I+V + ++ + ++ F FG+I +C +
Sbjct: 195 RNIKVGRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTL 254
Query: 633 VRDPQTLKSTGLCF 674
RDP T K G F
Sbjct: 255 ARDPTTGKHKGYGF 268
>AF114818-1|AAF23589.1| 559|Homo sapiens Ro
ribonucleoprotein-binding protein 1 protein.
Length = 559
Score = 36.7 bits (81), Expect = 0.11
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VG + E+ + +R+AFAPFG I + + D T+K G F
Sbjct: 131 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAF 174
Score = 35.5 bits (78), Expect = 0.25
Identities = 16/74 (21%), Positives = 34/74 (45%)
Frame = +3
Query: 453 KRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRI 632
+ + + + + A +Q + + I+V + ++ + ++ F FG+I +C +
Sbjct: 198 RNIKVGRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTL 257
Query: 633 VRDPQTLKSTGLCF 674
RDP T K G F
Sbjct: 258 ARDPTTGKHKGYGF 271
>U09123-1|AAB60650.1| 341|Homo sapiens hnRNP protein A2 protein.
Length = 341
Score = 36.3 bits (80), Expect = 0.14
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+F+G LS E LR + +G++++C ++RDP + +S G F
Sbjct: 11 LFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGF 54
>M29065-1|AAA36574.1| 341|Homo sapiens protein ( Human hnRNP A2
protein mRNA. ).
Length = 341
Score = 36.3 bits (80), Expect = 0.14
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+F+G LS E LR + +G++++C ++RDP + +S G F
Sbjct: 11 LFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGF 54
>D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 36.3 bits (80), Expect = 0.14
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +3
Query: 528 SNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
S+ +FVG LS + L + F+ +G+IS +V+D +T +S G F
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGF 51
>D28877-2|BAA06032.1| 341|Homo sapiens hnRNP A2 protein protein.
Length = 341
Score = 36.3 bits (80), Expect = 0.14
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+F+G LS E LR + +G++++C ++RDP + +S G F
Sbjct: 11 LFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGF 54
>BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 36.3 bits (80), Expect = 0.14
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +3
Query: 528 SNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
S+ +FVG LS + L + F+ +G+IS +V+D +T +S G F
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGF 51
>BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 36.3 bits (80), Expect = 0.14
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +3
Query: 528 SNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
S+ +FVG LS + L + F+ +G+IS +V+D +T +S G F
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGF 51
>BC000506-1|AAH00506.3| 249|Homo sapiens HNRPA2B1 protein protein.
Length = 249
Score = 36.3 bits (80), Expect = 0.14
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
+F+G LS E LR + +G++++C ++RDP + +S G F
Sbjct: 11 LFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGF 54
>BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 36.3 bits (80), Expect = 0.14
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +3
Query: 528 SNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
S+ +FVG LS + L + F+ +G+IS +V+D +T +S G F
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGF 51
>AK128423-1|BAC87434.1| 135|Homo sapiens protein ( Homo sapiens
cDNA FLJ46566 fis, clone THYMU3040829, moderately
similar to Cold-inducible RNA-binding protein. ).
Length = 135
Score = 36.3 bits (80), Expect = 0.14
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +3
Query: 528 SNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
S+ +FVG LS + L + F+ +G+IS +V+D +T +S G F
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGF 51
>AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RNA
binding protein protein.
Length = 172
Score = 36.3 bits (80), Expect = 0.14
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +3
Query: 528 SNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
S+ +FVG LS + L + F+ +G+IS +V+D +T +S G F
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGF 51
>AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 36.3 bits (80), Expect = 0.14
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +3
Query: 528 SNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
S+ +FVG LS + L + F+ +G+IS +V+D +T +S G F
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGF 51
>CR457257-1|CAG33538.1| 423|Homo sapiens RNPC4 protein.
Length = 423
Score = 35.9 bits (79), Expect = 0.19
Identities = 23/86 (26%), Positives = 38/86 (44%)
Frame = +3
Query: 459 VVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 638
+V + + N + N + ++VG L I ++LR F PFG+I N +++
Sbjct: 221 IVQASQAEKNRLAAMANNLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMK 280
Query: 639 DPQTLKSTGLCFXIIXKXSRCPXPAI 716
D T +S G I S C A+
Sbjct: 281 DSDTGRSKGYGL-ITFSDSECARRAL 305
>U96074-1|AAC78728.1| 320|Homo sapiens translation initiation
factor eIF3 p44 subunit protein.
Length = 320
Score = 35.5 bits (78), Expect = 0.25
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +3
Query: 510 QPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
QP ++ I V +LS + L+E F PFG IS + +D T +S G F
Sbjct: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAF 284
>CR457134-1|CAG33415.1| 320|Homo sapiens EIF3S4 protein.
Length = 320
Score = 35.5 bits (78), Expect = 0.25
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +3
Query: 510 QPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
QP ++ I V +LS + L+E F PFG IS + +D T +S G F
Sbjct: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAF 284
>BT006889-1|AAP35535.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 35.5 bits (78), Expect = 0.25
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +3
Query: 510 QPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
QP ++ I V +LS + L+E F PFG IS + +D T +S G F
Sbjct: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAF 284
>BC008469-1|AAH08469.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 35.5 bits (78), Expect = 0.25
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +3
Query: 510 QPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
QP ++ I V +LS + L+E F PFG IS + +D T +S G F
Sbjct: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAF 284
>BC006474-1|AAH06474.1| 1027|Homo sapiens Unknown (protein for
IMAGE:2820942) protein.
Length = 1027
Score = 35.5 bits (78), Expect = 0.25
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +2
Query: 248 NMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII 370
++GD S LY+GN++P + E LC FG+ G + KI+
Sbjct: 265 DVGDPS-TTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIM 304
>BC000733-1|AAH00733.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 35.5 bits (78), Expect = 0.25
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +3
Query: 510 QPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
QP ++ I V +LS + L+E F PFG IS + +D T +S G F
Sbjct: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAF 284
>AL845289-4|CAI12301.1| 129|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeceptor 116 (GPR116) protein.
Length = 129
Score = 35.5 bits (78), Expect = 0.25
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 543 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSTGLCF 674
++VGDL ++ +L E F+P G + + R+ RD T +S G +
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAY 56
Score = 33.9 bits (74), Expect = 0.77
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +3
Query: 447 MNKRVVLDKEMKVNWATSPXNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 626
MN V+ K +++ W+ + K+ N +F+ +L I+ L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVGN---VFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 627 R 629
+
Sbjct: 129 K 129
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,796,847
Number of Sequences: 237096
Number of extensions: 2502513
Number of successful extensions: 8085
Number of sequences better than 10.0: 427
Number of HSP's better than 10.0 without gapping: 5751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7843
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11095746082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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