Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_K10
         (1239 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    26   0.78 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   5.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   7.3  

>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 25.8 bits (54), Expect = 0.78
 Identities = 11/28 (39%), Positives = 11/28 (39%)
 Frame = +1

Query: 691 PPPTRXAXPXRPPXAXRPXXTPPXRPPH 774
           P P     P   P   RP   P  RPPH
Sbjct: 112 PHPRLRREPEAEPGNNRPVYIPQPRPPH 139



 Score = 25.8 bits (54), Expect = 0.78
 Identities = 11/28 (39%), Positives = 11/28 (39%)
 Frame = +1

Query: 691 PPPTRXAXPXRPPXAXRPXXTPPXRPPH 774
           P P     P   P   RP   P  RPPH
Sbjct: 138 PHPRLRREPEAEPGNNRPVYIPQPRPPH 165


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -3

Query: 67 AXXXGGPPSXXXXPPXXGRPG 5
          A   G PP+    PP  G PG
Sbjct: 33 APQRGSPPNPSQGPPPGGPPG 53



 Score = 22.6 bits (46), Expect = 7.3
 Identities = 10/33 (30%), Positives = 12/33 (36%)
 Frame = +2

Query: 686 AXPPRPGXPXPXAPPXXXAPXXPPXXDPPTXPP 784
           A  P+P        P   +P  P    PP  PP
Sbjct: 20  APGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPP 52



 Score = 22.6 bits (46), Expect = 7.3
 Identities = 10/31 (32%), Positives = 11/31 (35%)
 Frame = +2

Query: 692 PPRPGXPXPXAPPXXXAPXXPPXXDPPTXPP 784
           PP  G P P  P        PP  + P   P
Sbjct: 410 PPSAGAPMPPIPNMSNMSGMPPLPNMPGSMP 440


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -1

Query: 81   GPXGXLPXXGGPPPPPXXP 25
            G    +P  G P PPP  P
Sbjct: 1846 GSARNIPVSGSPEPPPPPP 1864


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.307    0.134    0.448 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,126
Number of Sequences: 438
Number of extensions: 4668
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 42262176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)