Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_K09
         (883 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC550.06c |hsp10||mitochondrial heat shock protein Hsp10|Schiz...    54   2e-08
SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces po...    28   2.0  
SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr...    27   4.7  
SPBC1289.16c ||SPBC8E4.06|copper amine oxidase |Schizosaccharomy...    27   4.7  
SPCC970.08 |||inositol polyphosphate kinase |Schizosaccharomyces...    26   6.2  

>SPCC550.06c |hsp10||mitochondrial heat shock protein
           Hsp10|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 104

 Score = 54.4 bits (125), Expect = 2e-08
 Identities = 25/64 (39%), Positives = 41/64 (64%)
 Frame = +2

Query: 293 RVLHGEVVAVGPGARKENGDFIPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDIL 472
           ++  G V++VG G   + G      V+VGD+VLLP YGG+ + +   E+EY L+R+ ++L
Sbjct: 42  KLSEGRVISVGKGGYNKEGKLAQPSVAVGDRVLLPAYGGSNIKV--GEEEYSLYRDHELL 99

Query: 473 AKIE 484
           A I+
Sbjct: 100 AIIK 103



 Score = 46.4 bits (105), Expect = 5e-06
 Identities = 20/36 (55%), Positives = 28/36 (77%)
 Frame = +1

Query: 187 AVKRLVPLLDRVLIKRAEAITKTAGGIVIPEKAQSK 294
           + K +VPLLDR+L++R +A TKTA GI +PEK+  K
Sbjct: 7   SAKSIVPLLDRILVQRIKADTKTASGIFLPEKSVEK 42


>SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 472

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
 Frame = +1

Query: 34  FLKIFESFEITRQPI-----GLFDSNILDSRKF*TAFIVLIFFAFEF 159
           F+   E+FE+T +P+       F SN+LD  K   A   +   AF F
Sbjct: 77  FMSFLENFELTGRPVVGTIFKYFQSNLLDLAKADLAMSSMFLLAFPF 123


>SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 1024

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -3

Query: 161 QNSKAKNMSTMNAVQNLRESRIFESNSPIGCRVISND-SKILRNSL 27
           QNS   N   +  ++N  +   FES S +G  +IS+  S+I+R  L
Sbjct: 562 QNSITSNKEAVKPIKNKPKPISFESLSAVGNLIISDSLSRIVRQIL 607


>SPBC1289.16c ||SPBC8E4.06|copper amine oxidase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 794

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
 Frame = +1

Query: 157 FC*LKIE-MANAVKRLVPLLDRVLIKRAEAITKTAGGIVIPEKAQSKGFTRRSSSGRSWS 333
           FC L+I  M + ++  V  +D +  K    ++K     +IPE          SS+GR+W 
Sbjct: 449 FC-LRINPMLDGLRNSVATVDALRDKNGTLVSK----YIIPETVTEAISNYDSSTGRTWD 503

Query: 334 PKRKWRLHPRS 366
                +LHP S
Sbjct: 504 ICNLNKLHPYS 514


>SPCC970.08 |||inositol polyphosphate kinase |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 967

 Score = 26.2 bits (55), Expect = 6.2
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = +1

Query: 268 VIPEKAQSKGFTRRSSSGRSWSPKRK 345
           VI EK  S   +RRSS GRS +PKR+
Sbjct: 210 VISEKDTS--LSRRSSRGRSSAPKRR 233


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,465,854
Number of Sequences: 5004
Number of extensions: 45221
Number of successful extensions: 125
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 124
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 442483990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)