Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_K04
(860 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 61 1e-09
11_01_0750 - 6315126-6315896,6316371-6316784 46 4e-05
11_02_0012 - 7346282-7347136,7347234-7347593 45 7e-05
11_01_0767 + 6438648-6438809,6439146-6440000 45 7e-05
01_01_1152 + 9170628-9171899 45 7e-05
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 43 3e-04
11_02_0014 - 7352619-7352918,7353173-7353418 42 6e-04
11_02_0011 - 7337618-7338496,7338596-7338991 42 6e-04
11_01_0771 + 6453130-6454488 42 6e-04
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 41 0.001
08_01_0906 + 8933230-8933797,8933894-8934543,8937956-8938615,893... 31 0.89
05_06_0044 - 25150322-25151260 31 1.6
05_05_0373 - 24478361-24479383 29 4.8
12_01_0053 - 438527-438670,439038-439247,439401-439530,439672-43... 29 6.3
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 60.9 bits (141), Expect = 1e-09
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Frame = +1
Query: 400 GVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEENTNN 576
G +++ AN V+V +L +A V D + ++ + + F K A + IN+W E T
Sbjct: 96 GPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFESATAG 155
Query: 577 RIKDLVNPDSLSSATAAVLVNAIYFXGSME 666
RIKD + D++ AT AVL NA+YF G E
Sbjct: 156 RIKDFLPKDAVDRATPAVLGNALYFKGDWE 185
Score = 32.3 bits (70), Expect = 0.51
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +2
Query: 656 GAWSSKFDERLTSDRDFYVSKDKTIKVPMM 745
G W SKFD R TSD FY+ + P M
Sbjct: 182 GDWESKFDARSTSDDVFYLPDGGHVSAPFM 211
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 46.0 bits (104), Expect = 4e-05
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Frame = +1
Query: 379 RDLRSIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDW 555
RD + G L A V+ L F ++ +V+ S + DF +K A IN W
Sbjct: 90 RDRSTSGGPRLAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQINSW 149
Query: 556 VEENTNNRIKDLVNPDSLSSATAAVLVNAIYFXG 657
V+++T + L+ ++ T VL +A+YF G
Sbjct: 150 VKDSTKGTVTTLLPAGTIDQNTGLVLGSALYFRG 183
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 45.2 bits (102), Expect = 7e-05
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +1
Query: 511 DFSKNTVAA-KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFXG 657
DF + ++ K IN WV + TN I++++ S+ TA VLVNAIYF G
Sbjct: 116 DFQRQPKSSRKKINKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFKG 165
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 45.2 bits (102), Expect = 7e-05
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 487 FNSDVQNIDFSKNTVAA-KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFXG 657
+ +DF + V A K IN WV T N I +++ P+S S T V+ NAIYF G
Sbjct: 42 YKGAASTVDFKNHPVEARKEINAWVARATKNLITEVIKPESQSVDTRHVVGNAIYFKG 99
>01_01_1152 + 9170628-9171899
Length = 423
Score = 45.2 bits (102), Expect = 7e-05
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +1
Query: 427 VYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKS-INDWVEENTNNRIKDLVNPD 603
V+V G L FA + + + + DF+ A+ +N +V + T I+D++ P+
Sbjct: 123 VWVDRGRALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEGLIRDVLPPN 182
Query: 604 SLSSATAAVLVNAIYFXGS 660
S+ S+T VL NA++F G+
Sbjct: 183 SVDSSTVVVLANAVHFKGT 201
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 225 QGKSIVLSAFSVLPPLAQLALASDGETHEELLKAIGFP 338
QG++ ++S S LA +A + GET ELL +G P
Sbjct: 57 QGRNFIVSPLSFHAALALVADGARGETQRELLGFLGSP 94
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +1
Query: 520 KNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFXGS 660
K A +N WVE+ T+ IK+++ P S+ T VL NA+YF G+
Sbjct: 209 KAAEVASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGA 255
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +1
Query: 544 INDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFXGS 660
+N WV+ T+ IK++ P S++ T VL NA+YF G+
Sbjct: 469 VNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGA 507
Score = 33.5 bits (73), Expect = 0.22
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 656 GAWSSKFDERLTSDRDFYVSKDKTIKVPMM 745
GAW+ KFD T D +F++ K+++ P M
Sbjct: 254 GAWTEKFDASKTKDGEFHLLDGKSVQAPFM 283
Score = 32.7 bits (71), Expect = 0.39
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +2
Query: 656 GAWSSKFDERLTSDRDFYVSKDKTIKVPMMFXRGDYNMERAQYLMAN*LKYL 811
GAW+ KFD T D +F++ ++++ P M R + L L YL
Sbjct: 506 GAWAEKFDVSKTEDGEFHLLDGESVQAPFMSTRKKQYLSSYDSLKVLKLPYL 557
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 41.9 bits (94), Expect = 6e-04
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +1
Query: 538 KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFXG 657
K IN+WV + TN I +++ S+ T VLVNAIYF G
Sbjct: 88 KKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKG 127
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 41.9 bits (94), Expect = 6e-04
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Frame = +1
Query: 328 SASLND--DAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDV 501
+ASL+D +++R D + G + A V+ + +L + + + +
Sbjct: 65 AASLDDLEESVRRAVEVGLADESASGGPRVSDACGVWHDETLELKPAYRAAAAGTYKAVT 124
Query: 502 QNIDFSKNTVAA-KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFXG 657
+ +F + + K IN WV + TN I +++ S+ TA VLVNAIYF G
Sbjct: 125 RAANFQRQPKRSRKKINKWVSKATNKLIPEILPDGSVHVDTALVLVNAIYFKG 177
>11_01_0771 + 6453130-6454488
Length = 452
Score = 41.9 bits (94), Expect = 6e-04
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = +1
Query: 451 LDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAV 630
+D ++ + + V ++ K A K IN W T I D++ P S+ TA V
Sbjct: 146 IDAFILLLDPSMIDQCVLDLVSEKAEEARKQINAWARRATGKLITDVLPPRSVGPETAVV 205
Query: 631 LVNAIYFXGSME 666
L NAIYF G +
Sbjct: 206 LGNAIYFKGKWD 217
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +1
Query: 535 AKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFXGS 660
A +N WV+ T+ IK+++ P S+ T VL NA+YF G+
Sbjct: 6 ASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGA 47
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 656 GAWSSKFDERLTSDRDFYVSKDKTIKVPMM 745
GAW+ KFD T D +F + K++ P M
Sbjct: 46 GAWTEKFDASKTKDGEFRLLDGKSVLAPFM 75
>08_01_0906 +
8933230-8933797,8933894-8934543,8937956-8938615,
8939751-8939817,8940421-8940724,8942993-8942996,
8944539-8946449
Length = 1387
Score = 31.5 bits (68), Expect = 0.89
Identities = 13/42 (30%), Positives = 28/42 (66%)
Frame = +1
Query: 340 NDDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLDENF 465
N++++ A+K+ ++ ++KG+E+ A K++ G LDE+F
Sbjct: 594 NEESVANYCATKNNNVWNVKGLEVTGAIKLFDQRWGNLDEDF 635
>05_06_0044 - 25150322-25151260
Length = 312
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 662 WSSKFDERLTSDRDFYVSKDKTIKVPMM 745
W F LT + DF+VS D ++VP M
Sbjct: 90 WDHPFFPHLTEEGDFHVSPDHDVRVPFM 117
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 427 VYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKS-INDWVEENTNNRIKDLVN 597
V+V +L+ FA + VF + V++ + N AA++ IN+W T +KD+++
Sbjct: 3 VWVDASLRLNPAFADTAASVFKAAVRS---AGNPAAARAEINEWFSSQTGGFVKDILS 57
>05_05_0373 - 24478361-24479383
Length = 340
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 529 VAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLV 636
VA + +DW E + ++ D V PD+LSS AAV +
Sbjct: 153 VALREPHDWGESTAHAQL-DAVAPDALSSCDAAVFL 187
>12_01_0053 -
438527-438670,439038-439247,439401-439530,439672-439842,
440233-440355,440439-440543,440656-441332,441498-441604,
441970-442177,442178-442245,444209-444411,444580-444663,
444780-445109,445238-445438,445667-445744,446236-446306
Length = 969
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 358 TEFASKSRDLRSIKGVELKMANKVYVHDG 444
T+ S S+D++ ++ VE + N VHDG
Sbjct: 520 TQIPSASKDIKEVRAVEEFLPNDFVVHDG 548
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,667,252
Number of Sequences: 37544
Number of extensions: 401008
Number of successful extensions: 994
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 994
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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