Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_J21
         (890 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0198 + 1429396-1430640                                           32   0.53 
01_01_0668 - 5109476-5110112,5110196-5110439,5110519-5110917,511...    29   5.0  

>05_01_0198 + 1429396-1430640
          Length = 414

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 14/31 (45%), Positives = 14/31 (45%)
 Frame = +1

Query: 715 FXXPVFYHY*XTPRPXXPPLHGYWXCPPXPP 807
           F   VF H    P P  PP   YW C P PP
Sbjct: 186 FQFEVFDH--RKPEPTSPPWEKYWHCDPLPP 214


>01_01_0668 -
           5109476-5110112,5110196-5110439,5110519-5110917,
           5111390-5111668,5111886-5112257,5112371-5112475,
           5112832-5112909,5112990-5113199,5113287-5113406,
           5113508-5113606,5113685-5113750,5113914-5114141,
           5114216-5114521,5115324-5115381
          Length = 1066

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +1

Query: 751 PRPXXPPLHGYWXCPPXPPN 810
           P P  P  H  W  PP PPN
Sbjct: 403 PGPKAPSAHPIWALPPPPPN 422


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,241,125
Number of Sequences: 37544
Number of extensions: 261077
Number of successful extensions: 408
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 405
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)