Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_J20
(849 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 27 0.17
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 23 3.6
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.7
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.7
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.7
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.7
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.7
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.7
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.7
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.7
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 23 4.7
AF134818-1|AAD40234.1| 130|Apis mellifera lambda crystallin-lik... 22 6.2
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 27.5 bits (58), Expect = 0.17
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 642 IIGGTDAGVNEYPHM 686
I+GGT+ G+NE+P M
Sbjct: 161 IVGGTNTGINEFPMM 175
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 23.0 bits (47), Expect = 3.6
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +1
Query: 247 VCTNIRKCQSALNDIRNRKS 306
+C ++ S+LN +RN KS
Sbjct: 34 ICNICKRVYSSLNSLRNHKS 53
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.7
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 624 WXQCLLRLIXPGER 583
W CLLR+ PG++
Sbjct: 302 WLPCLLRMSRPGKK 315
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.7
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 624 WXQCLLRLIXPGER 583
W CLLR+ PG++
Sbjct: 302 WLPCLLRMSRPGKK 315
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.7
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 624 WXQCLLRLIXPGER 583
W CLLR+ PG++
Sbjct: 302 WLPCLLRMSRPGKK 315
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.7
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 624 WXQCLLRLIXPGER 583
W CLLR+ PG++
Sbjct: 302 WLPCLLRMSRPGKK 315
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.7
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 624 WXQCLLRLIXPGER 583
W CLLR+ PG++
Sbjct: 302 WLPCLLRMSRPGKK 315
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.7
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 624 WXQCLLRLIXPGER 583
W CLLR+ PG++
Sbjct: 302 WLPCLLRMSRPGKK 315
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 4.7
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 624 WXQCLLRLIXPGER 583
W CLLR+ PG++
Sbjct: 370 WLPCLLRMSRPGKK 383
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 4.7
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 624 WXQCLLRLIXPGER 583
W CLLR+ PG++
Sbjct: 370 WLPCLLRMSRPGKK 383
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 22.6 bits (46), Expect = 4.7
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = -1
Query: 123 IIRTLFDWIVWHVTRLSPATGQDANQILRNSL 28
+I T+F W+ W + G D + + N+L
Sbjct: 214 MIGTIFLWLFWPSFNSAALEGDDQQRAIINTL 245
>AF134818-1|AAD40234.1| 130|Apis mellifera lambda crystallin-like
protein protein.
Length = 130
Score = 22.2 bits (45), Expect = 6.2
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = +3
Query: 456 QQWRQEMRGCTGGSDVSQDRAEGMGQMY 539
+ WR G DV +EG+G Y
Sbjct: 20 EAWRLVADGILNAKDVDAVMSEGLGMRY 47
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,859
Number of Sequences: 438
Number of extensions: 4388
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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