Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_J17
         (878 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81077-10|CAB03064.1|  151|Caenorhabditis elegans Hypothetical p...    29   5.8  
AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical...    29   5.8  
AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical...    29   5.8  
AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical ...    29   5.8  
AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical...    29   5.8  
AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical...    29   5.8  
AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical ...    29   5.8  
AF026203-1|AAB71246.2|  506|Caenorhabditis elegans Hypothetical ...    29   5.8  

>Z81077-10|CAB03064.1|  151|Caenorhabditis elegans Hypothetical
           protein F36A2.10 protein.
          Length = 151

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
 Frame = +3

Query: 246 SSARXSCRRRWTVTARSTTERSGRSSKSQRSLMTRSTRQARRRPEKRNRCISLTTVS-VA 422
           +S+R   R R   T RS + +S RS    RS    STR  +R P+K     +  ++S V 
Sbjct: 69  ASSRSRSRSRSKSTRRSRS-KSTRSRSRSRSRSRSSTRGKKRAPKKAVTTKAARSISPVK 127

Query: 423 AQKTRLLST 449
            +KT  + +
Sbjct: 128 VKKTEAIKS 136


>AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical
           protein Y45F10A.6c protein.
          Length = 1245

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2

Query: 365 AEETREKKSLYFINHGVGSCPENTVAIHGLCVERI 469
           +++ REK + Y   +G G C   TV +H L +E +
Sbjct: 456 SDKCREKWNKYLQEYGTGVCMYRTVELHRLLLEGV 490


>AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical
           protein Y45F10A.6a protein.
          Length = 1247

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2

Query: 365 AEETREKKSLYFINHGVGSCPENTVAIHGLCVERI 469
           +++ REK + Y   +G G C   TV +H L +E +
Sbjct: 456 SDKCREKWNKYLQEYGTGVCMYRTVELHRLLLEGV 490


>AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical
           protein Y45F10A.6b protein.
          Length = 1245

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2

Query: 365 AEETREKKSLYFINHGVGSCPENTVAIHGLCVERI 469
           +++ REK + Y   +G G C   TV +H L +E +
Sbjct: 456 SDKCREKWNKYLQEYGTGVCMYRTVELHRLLLEGV 490


>AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical
           protein Y45F10A.6c protein.
          Length = 1245

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2

Query: 365 AEETREKKSLYFINHGVGSCPENTVAIHGLCVERI 469
           +++ REK + Y   +G G C   TV +H L +E +
Sbjct: 456 SDKCREKWNKYLQEYGTGVCMYRTVELHRLLLEGV 490


>AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical
           protein Y45F10A.6a protein.
          Length = 1247

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2

Query: 365 AEETREKKSLYFINHGVGSCPENTVAIHGLCVERI 469
           +++ REK + Y   +G G C   TV +H L +E +
Sbjct: 456 SDKCREKWNKYLQEYGTGVCMYRTVELHRLLLEGV 490


>AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical
           protein Y45F10A.6b protein.
          Length = 1245

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2

Query: 365 AEETREKKSLYFINHGVGSCPENTVAIHGLCVERI 469
           +++ REK + Y   +G G C   TV +H L +E +
Sbjct: 456 SDKCREKWNKYLQEYGTGVCMYRTVELHRLLLEGV 490


>AF026203-1|AAB71246.2|  506|Caenorhabditis elegans Hypothetical
           protein E03E2.1 protein.
          Length = 506

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = +2

Query: 146 NVLAN*PSRTAKIYGAS*RRSPSTFLMKTKNSIQLCQGQLSPTL 277
           N LAN P    KIY A  +  P     +T +S++L Q  +  TL
Sbjct: 325 NFLANNPDVQDKIYEAEIKNQPEQISFETVSSLRLLQNCIFETL 368


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,529,133
Number of Sequences: 27780
Number of extensions: 303918
Number of successful extensions: 760
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)