Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_J13
(815 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81028-1|CAB02690.1| 1099|Caenorhabditis elegans Hypothetical pr... 101 6e-22
U58727-5|AAB00585.1| 1106|Caenorhabditis elegans Hypothetical pr... 100 2e-21
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 34 0.11
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 34 0.11
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 33 0.24
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 33 0.24
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 29 4.0
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 29 4.0
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 29 4.0
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 29 4.0
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 29 4.0
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 29 4.0
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 29 4.0
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 29 4.0
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 29 5.3
AC024751-12|ABF71717.1| 301|Caenorhabditis elegans Collagen pro... 29 5.3
AC006676-6|AAK71384.2| 652|Caenorhabditis elegans Hypothetical ... 28 7.0
>Z81028-1|CAB02690.1| 1099|Caenorhabditis elegans Hypothetical
protein B0365.1 protein.
Length = 1099
Score = 101 bits (242), Expect = 6e-22
Identities = 57/146 (39%), Positives = 82/146 (56%), Gaps = 2/146 (1%)
Frame = +2
Query: 269 AIYEATGKDLINRHIAS-GTALVPCRFATFEQSTVWEDELGKNPWLSKEQL-VVKPDQLI 442
A+ E +GK+++ ++ S G P F + + D K WL+++ V+KPDQLI
Sbjct: 5 AVSELSGKEVLYKYFESTGIVSAPHAFHV-KAGDKFSDVAAKYEWLAQDNKGVIKPDQLI 63
Query: 443 KRRGKLGLVGVNKTAAEVRRWLGEHMAKEQTIGACVGRLRHFIVEPFVXHEPSDEMYLCI 622
KRRGKLGLV + + E+ W G+ +G GRL FIVEPF H ++EMY+ I
Sbjct: 64 KRRGKLGLVKIG-SPKELEAWFGKTANSYVKVGQTEGRLHTFIVEPFCAHTENEEMYIAI 122
Query: 623 XSGRRSDTILFHHQGGVXVXXVDXLA 700
S R D I+F+ QGGV + V+ A
Sbjct: 123 YSERCRDVIMFYEQGGVDIGDVEEKA 148
>U58727-5|AAB00585.1| 1106|Caenorhabditis elegans Hypothetical
protein D1005.1 protein.
Length = 1106
Score = 99.5 bits (237), Expect = 2e-21
Identities = 57/146 (39%), Positives = 82/146 (56%), Gaps = 2/146 (1%)
Frame = +2
Query: 269 AIYEATGKDLINRHIA-SGTALVPCRFATFEQSTVWEDELGKNPWLSKEQL-VVKPDQLI 442
A+ E +GK+++ ++ SG P F + +++ K WL+++ V+KPDQLI
Sbjct: 5 AVSELSGKEVLYKYFEPSGLLSAPHAFHV-KAGENFDEIANKYEWLARDNKGVIKPDQLI 63
Query: 443 KRRGKLGLVGVNKTAAEVRRWLGEHMAKEQTIGACVGRLRHFIVEPFVXHEPSDEMYLCI 622
KRRGKLGLV + T E++ W + +G GRL FIVEPF H DEMY+ I
Sbjct: 64 KRRGKLGLVKIG-TPQELKAWFEKTGDSYVRVGQTEGRLHTFIVEPFCAHTEKDEMYIAI 122
Query: 623 XSGRRSDTILFHHQGGVXVXXVDXLA 700
S R D I+F+ QGGV + V+ A
Sbjct: 123 YSERFRDVIMFYEQGGVDIGDVEEKA 148
>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
protein.
Length = 4450
Score = 34.3 bits (75), Expect = 0.11
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -3
Query: 726 VHGAPLVGWARXSTXXTXTPPWWW 655
V GAPLVG R S T + PWWW
Sbjct: 3887 VTGAPLVGRLRASPYITSSWPWWW 3910
>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
805, isoform b protein.
Length = 4450
Score = 34.3 bits (75), Expect = 0.11
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -3
Query: 726 VHGAPLVGWARXSTXXTXTPPWWW 655
V GAPLVG R S T + PWWW
Sbjct: 3887 VTGAPLVGRLRASPYITSSWPWWW 3910
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical
protein F15G9.4b protein.
Length = 5198
Score = 33.1 bits (72), Expect = 0.24
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +2
Query: 350 TFEQSTVWEDELGKNPWLSKEQLVVKPDQLIK-RRGKLGLVGVNKTAAEVRRWLGEHMAK 526
+FE T+ K W + ++KPD IK G+L ++G A +GE+MA
Sbjct: 720 SFECKTIRGKPHPKIRWFKNGKDLIKPDDYIKINEGQLHIMGAKDEDAGAYSCVGENMAG 779
Query: 527 E--QTIGACVGRLRHFIVEP 580
+ Q VGR+ I P
Sbjct: 780 KDVQVANLSVGRVPTIIESP 799
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical
protein F15G9.4a protein.
Length = 5175
Score = 33.1 bits (72), Expect = 0.24
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +2
Query: 350 TFEQSTVWEDELGKNPWLSKEQLVVKPDQLIK-RRGKLGLVGVNKTAAEVRRWLGEHMAK 526
+FE T+ K W + ++KPD IK G+L ++G A +GE+MA
Sbjct: 720 SFECKTIRGKPHPKIRWFKNGKDLIKPDDYIKINEGQLHIMGAKDEDAGAYSCVGENMAG 779
Query: 527 E--QTIGACVGRLRHFIVEP 580
+ Q VGR+ I P
Sbjct: 780 KDVQVANLSVGRVPTIIESP 799
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical
protein F15G9.4b protein.
Length = 5198
Score = 33.1 bits (72), Expect = 0.24
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +2
Query: 350 TFEQSTVWEDELGKNPWLSKEQLVVKPDQLIK-RRGKLGLVGVNKTAAEVRRWLGEHMAK 526
+FE T+ K W + ++KPD IK G+L ++G A +GE+MA
Sbjct: 720 SFECKTIRGKPHPKIRWFKNGKDLIKPDDYIKINEGQLHIMGAKDEDAGAYSCVGENMAG 779
Query: 527 E--QTIGACVGRLRHFIVEP 580
+ Q VGR+ I P
Sbjct: 780 KDVQVANLSVGRVPTIIESP 799
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical
protein F15G9.4a protein.
Length = 5175
Score = 33.1 bits (72), Expect = 0.24
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +2
Query: 350 TFEQSTVWEDELGKNPWLSKEQLVVKPDQLIK-RRGKLGLVGVNKTAAEVRRWLGEHMAK 526
+FE T+ K W + ++KPD IK G+L ++G A +GE+MA
Sbjct: 720 SFECKTIRGKPHPKIRWFKNGKDLIKPDDYIKINEGQLHIMGAKDEDAGAYSCVGENMAG 779
Query: 527 E--QTIGACVGRLRHFIVEP 580
+ Q VGR+ I P
Sbjct: 780 KDVQVANLSVGRVPTIIESP 799
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 33.1 bits (72), Expect = 0.24
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +2
Query: 350 TFEQSTVWEDELGKNPWLSKEQLVVKPDQLIK-RRGKLGLVGVNKTAAEVRRWLGEHMAK 526
+FE T+ K W + ++KPD IK G+L ++G A +GE+MA
Sbjct: 720 SFECKTIRGKPHPKIRWFKNGKDLIKPDDYIKINEGQLHIMGAKDEDAGAYSCVGENMAG 779
Query: 527 E--QTIGACVGRLRHFIVEP 580
+ Q VGR+ I P
Sbjct: 780 KDVQVANLSVGRVPTIIESP 799
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = -3
Query: 552 PTQAPIVCSLAMCSPSQRRTSAAVLFTPTRPSLPRRLISWSGFTTNCSFESHGFFPSSSS 373
P+ +P S + SPS TS + ++PT PS S+S + + S S + PSS S
Sbjct: 1610 PSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPS 1667
Query: 372 HT 367
++
Sbjct: 1668 YS 1669
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = -3
Query: 552 PTQAPIVCSLAMCSPSQRRTSAAVLFTPTRPSLPRRLISWSGFTTNCSFESHGFFPSSSS 373
P+ +P S + SPS TS + ++PT PS S+S + + S S + PSS S
Sbjct: 1617 PSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPS 1674
Query: 372 HT 367
++
Sbjct: 1675 YS 1676
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Frame = -2
Query: 700 GQGVHXSDV-----DPSLVVEQDGVGAPARXYAQVHLVARFVXDEGLDYKVPQPPDAGPY 536
GQ VH V DPSL +E G P +++ + F GL++ P D G Y
Sbjct: 1370 GQSVHMDCVVQPINDPSLRIEWFHDGRPLMFGSRIRTIHDFGY-VGLEFLHIHPEDTGTY 1428
Query: 535 RLLLGHVLAEPTPDL 491
+++ E T D+
Sbjct: 1429 TCKATNLIGEATTDI 1443
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Frame = -2
Query: 700 GQGVHXSDV-----DPSLVVEQDGVGAPARXYAQVHLVARFVXDEGLDYKVPQPPDAGPY 536
GQ VH V DPSL +E G P +++ + F GL++ P D G Y
Sbjct: 1287 GQSVHMDCVVQPINDPSLRIEWFHDGRPLMFGSRIRTIHDFGY-VGLEFLHIHPEDTGTY 1345
Query: 535 RLLLGHVLAEPTPDL 491
+++ E T D+
Sbjct: 1346 TCKATNLIGEATTDI 1360
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Frame = -2
Query: 700 GQGVHXSDV-----DPSLVVEQDGVGAPARXYAQVHLVARFVXDEGLDYKVPQPPDAGPY 536
GQ VH V DPSL +E G P +++ + F GL++ P D G Y
Sbjct: 1608 GQSVHMDCVVQPINDPSLRIEWFHDGRPLMFGSRIRTIHDFGY-VGLEFLHIHPEDTGTY 1666
Query: 535 RLLLGHVLAEPTPDL 491
+++ E T D+
Sbjct: 1667 TCKATNLIGEATTDI 1681
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Frame = -2
Query: 700 GQGVHXSDV-----DPSLVVEQDGVGAPARXYAQVHLVARFVXDEGLDYKVPQPPDAGPY 536
GQ VH V DPSL +E G P +++ + F GL++ P D G Y
Sbjct: 1608 GQSVHMDCVVQPINDPSLRIEWFHDGRPLMFGSRIRTIHDFGY-VGLEFLHIHPEDTGTY 1666
Query: 535 RLLLGHVLAEPTPDL 491
+++ E T D+
Sbjct: 1667 TCKATNLIGEATTDI 1681
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Frame = -2
Query: 700 GQGVHXSDV-----DPSLVVEQDGVGAPARXYAQVHLVARFVXDEGLDYKVPQPPDAGPY 536
GQ VH V DPSL +E G P +++ + F GL++ P D G Y
Sbjct: 1608 GQSVHMDCVVQPINDPSLRIEWFHDGRPLMFGSRIRTIHDFGY-VGLEFLHIHPEDTGTY 1666
Query: 535 RLLLGHVLAEPTPDL 491
+++ E T D+
Sbjct: 1667 TCKATNLIGEATTDI 1681
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Frame = -2
Query: 700 GQGVHXSDV-----DPSLVVEQDGVGAPARXYAQVHLVARFVXDEGLDYKVPQPPDAGPY 536
GQ VH V DPSL +E G P +++ + F GL++ P D G Y
Sbjct: 1303 GQSVHMDCVVQPINDPSLRIEWFHDGRPLMFGSRIRTIHDFGY-VGLEFLHIHPEDTGTY 1361
Query: 535 RLLLGHVLAEPTPDL 491
+++ E T D+
Sbjct: 1362 TCKATNLIGEATTDI 1376
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -3
Query: 549 TQAPIVCSLAMCSPSQRRTSAAVLFTPTRPSLPRRLISWSGFTTN-CSFESHGFFPSSSS 373
T AP + + + TSA T + R + + TN CS +S GF+P+S++
Sbjct: 435 TTAPTTVATTVTTGRPPMTSAVTTTTAATTTTTRAATTTTASNTNVCSGKSDGFYPNSNN 494
>AC024751-12|ABF71717.1| 301|Caenorhabditis elegans Collagen
protein 47 protein.
Length = 301
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +1
Query: 361 EHSVGG*AGKKSMALEGAIGREAGPANQASRQTGSGRREQDCGGGPALARRAHGQGA 531
E VGG K ++++G IGR N+ S+ + G + GGP +A +GA
Sbjct: 183 EPGVGGMDAVKIVSVDGKIGRRGEAGNKGSKGSRGGVGK---AGGPGVAGEMGEKGA 236
>AC006676-6|AAK71384.2| 652|Caenorhabditis elegans Hypothetical
protein M04F3.5 protein.
Length = 652
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 510 PSQRRTSAAVLFTPTRPSLPRRLISWSGFTTNCSFESHGFF 388
P RRTS TPT PS+ + ++ S + S +S G +
Sbjct: 577 PPARRTSQITAATPTAPSVAEQRMNGSTMGSRQSLDSAGLY 617
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,853,391
Number of Sequences: 27780
Number of extensions: 403189
Number of successful extensions: 1152
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -