Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_J05
(882 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0058 + 17548945-17548947,17549234-17549281,17549618-175496... 295 4e-80
01_03_0277 + 14496298-14496300,14496875-14496952,14497061-144972... 293 9e-80
02_01_0047 - 316960-317397,317647-317744,317837-318017,318122-31... 293 2e-79
09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078 31 1.2
08_01_0220 - 1751367-1752854 31 1.6
02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258 29 4.9
12_02_0513 - 19906147-19906271,19906470-19906791,19907091-199076... 29 6.5
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 29 6.5
02_01_0285 - 1913425-1914065,1914094-1914177,1914249-1915140,191... 28 8.6
>05_04_0058 +
17548945-17548947,17549234-17549281,17549618-17549695,
17549952-17550132,17550223-17550320,17550827-17551258
Length = 279
Score = 295 bits (723), Expect = 4e-80
Identities = 133/192 (69%), Positives = 157/192 (81%)
Frame = +1
Query: 67 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEV 246
ARG KKHLKRLNAP WMLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT EV
Sbjct: 18 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYREV 77
Query: 247 LKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKY 426
+ I+ QR + VDGKVRTD TYPAGFMDVVSI KT E FRL+YD KGRF +H I E+AK+
Sbjct: 78 ISILMQRHVMVDGKVRTDKTYPAGFMDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAKF 137
Query: 427 KLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLC 606
KLCKV+ V G K +P+L T+DGRTIRYPDPLIK ND+I++D+ T KI+DFIKF+ GN+
Sbjct: 138 KLCKVRSVQFGQKGIPFLNTNDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNIV 197
Query: 607 MITGGRNLGACG 642
M+TGGRN G G
Sbjct: 198 MVTGGRNTGRVG 209
Score = 48.4 bits (110), Expect = 8e-06
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = +2
Query: 632 GRVGTIVXRERHPGSFDIVHIKDSTGHTFATKV 730
GRVG I RE+H GSF+ +H++D+ GH FAT++
Sbjct: 206 GRVGVIKSREKHKGSFETIHVEDALGHQFATRM 238
Score = 41.9 bits (94), Expect = 7e-04
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = +3
Query: 729 LNNVFIIGKGTXAYISLPRGKGIRLTIAEXRDKRIAXXVA 848
+ NVF IGK ++SLP+GKGI+L+I E KR A A
Sbjct: 238 MGNVFTIGKERKPWVSLPKGKGIKLSIIEEARKRNAEAAA 277
>01_03_0277 +
14496298-14496300,14496875-14496952,14497061-14497241,
14497348-14497445,14497542-14497979
Length = 265
Score = 293 bits (720), Expect = 9e-80
Identities = 131/193 (67%), Positives = 158/193 (81%)
Frame = +1
Query: 64 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 243
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT E
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60
Query: 244 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 423
V+ I+ QR + VDGKVRTD TYPAGFMDV+SI KT E +RL+YD KGRF + + E+AK
Sbjct: 61 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAK 120
Query: 424 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 603
+KLCKV+ V G K +PYL T+DGRTIRYPDPLIK ND+I++D+ T KI+DFIKF+ GN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNV 180
Query: 604 CMITGGRNLGACG 642
M+TGGRN G G
Sbjct: 181 VMVTGGRNTGRVG 193
Score = 48.8 bits (111), Expect = 6e-06
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = +2
Query: 632 GRVGTIVXRERHPGSFDIVHIKDSTGHTFATKV 730
GRVG I RE+H GSF+ +H++D+ GH FAT++
Sbjct: 190 GRVGVIKNREKHKGSFETIHVEDALGHAFATRL 222
Score = 48.0 bits (109), Expect = 1e-05
Identities = 23/41 (56%), Positives = 29/41 (70%)
Frame = +3
Query: 729 LNNVFIIGKGTXAYISLPRGKGIRLTIAEXRDKRIAXXVAA 851
L NVF IGKG ++SLP+GKGI+L+I E + KR A AA
Sbjct: 222 LGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRKRDAAAQAA 262
>02_01_0047 -
316960-317397,317647-317744,317837-318017,318122-318199,
319023-319025
Length = 265
Score = 293 bits (718), Expect = 2e-79
Identities = 130/193 (67%), Positives = 158/193 (81%)
Frame = +1
Query: 64 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 243
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT E
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60
Query: 244 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 423
V+ I+ QR + VDGKVRTD TYPAGFMDV+SI KT E +RL+YD KGRF + + E+AK
Sbjct: 61 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAK 120
Query: 424 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 603
+KLCKV+ V G K +PYL T+DGRTIRYPDP+IK ND+I++D+ T KI+DFIKF+ GN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPIIKANDTIKIDLETNKIVDFIKFDVGNV 180
Query: 604 CMITGGRNLGACG 642
M+TGGRN G G
Sbjct: 181 VMVTGGRNTGRVG 193
Score = 48.4 bits (110), Expect = 8e-06
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = +2
Query: 632 GRVGTIVXRERHPGSFDIVHIKDSTGHTFATKV 730
GRVG I RE+H GSF+ +H++D+ GH FAT++
Sbjct: 190 GRVGVIKNREKHKGSFETIHVEDALGHQFATRL 222
Score = 48.0 bits (109), Expect = 1e-05
Identities = 23/41 (56%), Positives = 29/41 (70%)
Frame = +3
Query: 729 LNNVFIIGKGTXAYISLPRGKGIRLTIAEXRDKRIAXXVAA 851
L NVF IGKG ++SLP+GKGI+L+I E + KR A AA
Sbjct: 222 LGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRKRDAAAQAA 262
>09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078
Length = 574
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 208 SGKSPGASTRATCGDRLTVSVHTHRQVCPTSMLW 107
+G+SPG + RA GD L V+VH T++ W
Sbjct: 50 NGESPGPTIRAAQGDTLVVTVHNMLDTENTAIHW 83
>08_01_0220 - 1751367-1752854
Length = 495
Score = 30.7 bits (66), Expect = 1.6
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 16/113 (14%)
Frame = +1
Query: 412 EEAKYKLCKVKRVATGPKNVPY-----------LVTHDGRTIRYPDPLIKVNDSIQLD-- 552
+ A K+C+ + V + P+ P L+ HDGR + PDPL + ++ L
Sbjct: 190 QPAFMKICQERHVVSTPEKAPAAPLPRSEYLRPLIFHDGRLVGRPDPLACLAVALWLPLG 249
Query: 553 --IATTKIM-DFIKFESGNLCMITGGRNLGACGHHRVPRETSRLLRHCAHQGL 702
+A T+I+ F+ + G L G + A PR L C H+ L
Sbjct: 250 AALAVTRILIAFLPYSVGLLLAAATGFQIRAHLGGAPPRWRGGTLYACNHRTL 302
>02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258
Length = 874
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -2
Query: 221 FRRFLRKITRGKHSRNLWGPVDGLGAYTPPSLSNIHALGAFKR 93
F L ++ + L G G+G Y PPSLSN + AFKR
Sbjct: 35 FNVALNRLPASAGASPLLGHGHGVGVYYPPSLSNA-LVAAFKR 76
>12_02_0513 -
19906147-19906271,19906470-19906791,19907091-19907695,
19908569-19908617
Length = 366
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 180 AQLVGTG*RSRCIHTAK-FVQHPCFGSV*ALQMLLRASR 67
++ V G R+RC+H A V+ P FG + ++L ASR
Sbjct: 39 SRAVKAGRRARCVHHASALVRPPSFGRLAMFVLILSASR 77
>08_02_0864 + 21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +3
Query: 105 SQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESS----EVCFDRKRSPENCETTP 269
+QS+ V + RCV ETV + P + R+ G+F + + FD+ + +CE P
Sbjct: 894 NQSILVSLSSRCVWKETVCQRPHLLRIKYYGNFDKPLGRFLRDQLFDQNNNCISCELPP 952
>02_01_0285 -
1913425-1914065,1914094-1914177,1914249-1915140,
1915205-1915249,1915335-1915870,1915987-1916041
Length = 750
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 358 FRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 462
+ LIYD++G + + P++A L ++ V T P
Sbjct: 147 YALIYDIQGSLALPILDPDDASSPLAVLELVTTAP 181
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,814,059
Number of Sequences: 37544
Number of extensions: 574068
Number of successful extensions: 1718
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1717
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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