Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_I19
         (1050 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S80905-1|AAB50686.1|  382|Homo sapiens Con1 protein.                   31   7.0  
K03208-1|AAA60189.1|  251|Homo sapiens PRB2 protein.                   31   7.0  

>S80905-1|AAB50686.1|  382|Homo sapiens Con1 protein.
          Length = 382

 Score = 31.1 bits (67), Expect = 7.0
 Identities = 19/64 (29%), Positives = 23/64 (35%)
 Frame = +3

Query: 417 KXXXPPPRGGAXXKXXXSXFXXKKKXXPXXXGXXXKKXXPPPPPXXKKXXXXXXXXXXPP 596
           K   PPP+GG+  K   S     K   P   G    +  PPPP   +            P
Sbjct: 248 KPQGPPPQGGS--KSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGP 305

Query: 597 PPXG 608
           PP G
Sbjct: 306 PPPG 309


>K03208-1|AAA60189.1|  251|Homo sapiens PRB2 protein.
          Length = 251

 Score = 31.1 bits (67), Expect = 7.0
 Identities = 19/64 (29%), Positives = 23/64 (35%)
 Frame = +3

Query: 417 KXXXPPPRGGAXXKXXXSXFXXKKKXXPXXXGXXXKKXXPPPPPXXKKXXXXXXXXXXPP 596
           K   PPP+GG+  K   S     K   P   G    +  PPPP   +            P
Sbjct: 117 KPQGPPPQGGS--KSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGP 174

Query: 597 PPXG 608
           PP G
Sbjct: 175 PPPG 178


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,854,568
Number of Sequences: 237096
Number of extensions: 2049437
Number of successful extensions: 4415
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3121
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 14263098108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)