SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_I14
         (1417 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC073988-1|AAH73988.1|  682|Homo sapiens FMNL1 protein protein.        33   3.3  
BC029861-1|AAH29861.1|  173|Homo sapiens MGC34800 protein protein.     33   3.3  
AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein.     33   3.3  
AF432213-1|AAL99920.1|  991|Homo sapiens CLL-associated antigen ...    33   3.3  
AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.     33   3.3  
U19927-1|AAC50140.1|  502|Homo sapiens WAS protein.                    32   4.4  
U12707-1|AAA62663.1|  502|Homo sapiens Wiskott-Aldrich syndrome ...    32   4.4  
BC034003-1|AAH34003.1|  600|Homo sapiens PRR12 protein protein.        32   4.4  
BC012738-1|AAH12738.1|  502|Homo sapiens Wiskott-Aldrich syndrom...    32   4.4  
BC002961-1|AAH02961.1|  514|Homo sapiens WAS protein protein.          32   4.4  
AF115549-1|AAD26691.1|  502|Homo sapiens Wiskott-Aldrich Syndrom...    32   4.4  
AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.     32   4.4  
AK127078-1|BAC86815.1|  844|Homo sapiens protein ( Homo sapiens ...    31   7.7  
AB209373-1|BAD92610.1|  410|Homo sapiens CS0DA006YC23 variant pr...    31   7.7  

>BC073988-1|AAH73988.1|  682|Homo sapiens FMNL1 protein protein.
          Length = 682

 Score = 32.7 bits (71), Expect = 3.3
 Identities = 15/42 (35%), Positives = 16/42 (38%)
 Frame = -3

Query: 878 PRXPPSPXXPRTLXPXPXXFXXPXXXPYGTXPPPPXXPAXXG 753
           P  PP+P  P  L P P     P        PPPP  P   G
Sbjct: 154 PEPPPAPPLPGDLPPPPPPPPPPPGTDGPVPPPPPPPPPPPG 195


>BC029861-1|AAH29861.1|  173|Homo sapiens MGC34800 protein protein.
          Length = 173

 Score = 32.7 bits (71), Expect = 3.3
 Identities = 23/73 (31%), Positives = 26/73 (35%), Gaps = 1/73 (1%)
 Frame = -1

Query: 1372 AGPPPPISXXSXFPRXPXXSPX-PPLLXHXXXXSXPQRXPSPXXXXSPXRRRAXPCXRGL 1196
            AGPP         PR P   P  PP L            P+     +P  R      RGL
Sbjct: 57   AGPPETAHAADPQPRGPQAPPRLPPSLSPERVHPGQPAAPAEPAPGAPALRSGPSQPRGL 116

Query: 1195 XLPRPXXSTAXSS 1157
             LP P  + A SS
Sbjct: 117  RLPVPVPACAGSS 129


>AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein.
          Length = 1100

 Score = 32.7 bits (71), Expect = 3.3
 Identities = 15/42 (35%), Positives = 16/42 (38%)
 Frame = -3

Query: 878 PRXPPSPXXPRTLXPXPXXFXXPXXXPYGTXPPPPXXPAXXG 753
           P  PP+P  P  L P P     P        PPPP  P   G
Sbjct: 572 PEPPPAPPLPGDLPPPPPPPPPPPGTDGPVPPPPPPPPPPPG 613


>AF432213-1|AAL99920.1|  991|Homo sapiens CLL-associated antigen
           KW-13 protein.
          Length = 991

 Score = 32.7 bits (71), Expect = 3.3
 Identities = 15/42 (35%), Positives = 16/42 (38%)
 Frame = -3

Query: 878 PRXPPSPXXPRTLXPXPXXFXXPXXXPYGTXPPPPXXPAXXG 753
           P  PP+P  P  L P P     P        PPPP  P   G
Sbjct: 463 PEPPPAPPLPGDLPPPPPPPPPPPGTDGPVPPPPPPPPPPPG 504


>AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.
          Length = 1134

 Score = 32.7 bits (71), Expect = 3.3
 Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 4/56 (7%)
 Frame = -1

Query: 1366 PPPPISXXSXFPRXPXXSPXPPLLXHXXXXSXP----QRXPSPXXXXSPXRRRAXP 1211
            PPPP+      P  P   P PPLL      + P     R P P     P RRR+ P
Sbjct: 985  PPPPLPR----PHPPPPPPLPPLLPPPQTRTLPAARTMRQPPPPRLALPRRRRSPP 1036


>U19927-1|AAC50140.1|  502|Homo sapiens WAS protein.
          Length = 502

 Score = 32.3 bits (70), Expect = 4.4
 Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
 Frame = -1

Query: 190 PSIXGRXPPXXXPRSXXPP-RGXXXXXXXXXLXSXPPASPXPXAXXGAXGAPPXXXPPP 17
           P   G  PP   PR   PP RG              P  P P    G    PP   PPP
Sbjct: 344 PVPLGIAPPPPTPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPP 402


>U12707-1|AAA62663.1|  502|Homo sapiens Wiskott-Aldrich syndrome
           protein protein.
          Length = 502

 Score = 32.3 bits (70), Expect = 4.4
 Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
 Frame = -1

Query: 190 PSIXGRXPPXXXPRSXXPP-RGXXXXXXXXXLXSXPPASPXPXAXXGAXGAPPXXXPPP 17
           P   G  PP   PR   PP RG              P  P P    G    PP   PPP
Sbjct: 344 PVPLGIAPPPPTPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPP 402


>BC034003-1|AAH34003.1|  600|Homo sapiens PRR12 protein protein.
          Length = 600

 Score = 32.3 bits (70), Expect = 4.4
 Identities = 16/49 (32%), Positives = 19/49 (38%)
 Frame = -3

Query: 911 PXXXPXXXLXXPRXPPSPXXPRTLXPXPXXFXXPXXXPYGTXPPPPXXP 765
           P   P      P+ PP P  P+   P P     P   P  + PPPP  P
Sbjct: 94  PPTPPPAPTPQPQPPPPPPPPQPALPSP----PPLVAPTPSSPPPPPLP 138


>BC012738-1|AAH12738.1|  502|Homo sapiens Wiskott-Aldrich syndrome
           (eczema-thrombocytopenia) protein.
          Length = 502

 Score = 32.3 bits (70), Expect = 4.4
 Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
 Frame = -1

Query: 190 PSIXGRXPPXXXPRSXXPP-RGXXXXXXXXXLXSXPPASPXPXAXXGAXGAPPXXXPPP 17
           P   G  PP   PR   PP RG              P  P P    G    PP   PPP
Sbjct: 344 PVPLGIAPPPPTPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPP 402


>BC002961-1|AAH02961.1|  514|Homo sapiens WAS protein protein.
          Length = 514

 Score = 32.3 bits (70), Expect = 4.4
 Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
 Frame = -1

Query: 190 PSIXGRXPPXXXPRSXXPP-RGXXXXXXXXXLXSXPPASPXPXAXXGAXGAPPXXXPPP 17
           P   G  PP   PR   PP RG              P  P P    G    PP   PPP
Sbjct: 356 PVPLGIAPPPPTPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPP 414


>AF115549-1|AAD26691.1|  502|Homo sapiens Wiskott-Aldrich Syndrome
           protein protein.
          Length = 502

 Score = 32.3 bits (70), Expect = 4.4
 Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
 Frame = -1

Query: 190 PSIXGRXPPXXXPRSXXPP-RGXXXXXXXXXLXSXPPASPXPXAXXGAXGAPPXXXPPP 17
           P   G  PP   PR   PP RG              P  P P    G    PP   PPP
Sbjct: 344 PVPLGIAPPPPTPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPP 402


>AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.
          Length = 1217

 Score = 32.3 bits (70), Expect = 4.4
 Identities = 16/49 (32%), Positives = 19/49 (38%)
 Frame = -3

Query: 911 PXXXPXXXLXXPRXPPSPXXPRTLXPXPXXFXXPXXXPYGTXPPPPXXP 765
           P   P      P+ PP P  P+   P P     P   P  + PPPP  P
Sbjct: 639 PPTPPPAPTPQPQPPPPPPPPQPALPSP----PPLVAPTPSSPPPPPLP 683


>AK127078-1|BAC86815.1|  844|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45135 fis, clone BRAWH3038252, highly  similar
           to Formin 1 isoform IV. ).
          Length = 844

 Score = 31.5 bits (68), Expect = 7.7
 Identities = 15/46 (32%), Positives = 16/46 (34%)
 Frame = -3

Query: 911 PXXXPXXXLXXPRXPPSPXXPRTLXPXPXXFXXPXXXPYGTXPPPP 774
           P   P      P  PP P  P +  P       P   P G  PPPP
Sbjct: 336 PPLPPPSSAGPPPPPPPPPLPNSPAPPNPGGPPPAPPPPGLAPPPP 381


>AB209373-1|BAD92610.1|  410|Homo sapiens CS0DA006YC23 variant
           protein.
          Length = 410

 Score = 31.5 bits (68), Expect = 7.7
 Identities = 16/46 (34%), Positives = 18/46 (39%)
 Frame = -2

Query: 879 PXXPPXXXXPPXALPXPXXLXXPPXXXLWXPXXPPXRXRXXXVRAV 742
           P  PP    PP A+P P     PP    + P  PP   R     AV
Sbjct: 316 PVPPPPASFPPPAIPPPTP-GYPPPPPTYNPNFPPPPPRLPPTHAV 360


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.315    0.144    0.455 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,552,256
Number of Sequences: 237096
Number of extensions: 1627367
Number of successful extensions: 12346
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10610
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 20717852652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)

- SilkBase 1999-2023 -