Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_I13
         (855 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0260 + 19501643-19503010                                         30   2.0  
10_08_0117 + 14942478-14942628,14943247-14943315,14943701-149438...    28   8.3  

>05_04_0260 + 19501643-19503010
          Length = 455

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
 Frame = -3

Query: 391 DGSCFAVQFSKSRFHLRPRASSRLHSARNWSACSGVRPANSSGVCM---SPAT--PVPDI 227
           DG+   V  S++RF L  + +     +R ++ C  + PA+++GV +   +P T  P  D+
Sbjct: 176 DGATGMVSLSRARFALPTQLADTFGFSRKFALC--LPPASAAGVVVFGDAPYTFQPGVDL 233

Query: 226 ASSAV*TPLI 197
           + S + TPL+
Sbjct: 234 SKSLIYTPLL 243


>10_08_0117 +
           14942478-14942628,14943247-14943315,14943701-14943801,
           14944395-14944619
          Length = 181

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +1

Query: 391 QSSDLKRKLGITVWKEITEDVNQGF 465
           Q  DL  K G+TV    TE+V QGF
Sbjct: 69  QDLDLAEKKGLTVMLSTTENVEQGF 93


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,179,324
Number of Sequences: 37544
Number of extensions: 342938
Number of successful extensions: 940
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)