Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_I12
         (868 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   4.8  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   4.8  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   4.8  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   6.4  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   6.4  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +1

Query: 643 RYQAFPPGSSLVXXPCSDPAAYRNTCPPXS 732
           R+   P G +       +PA YR  CP  S
Sbjct: 261 RFFGLPVGVTAAIPTSENPADYRYFCPDGS 290


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +1

Query: 643 RYQAFPPGSSLVXXPCSDPAAYRNTCPPXS 732
           R+   P G +       +PA YR  CP  S
Sbjct: 261 RFFGLPVGVTAAIPTSENPADYRYFCPDGS 290


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +1

Query: 643 RYQAFPPGSSLVXXPCSDPAAYRNTCPPXS 732
           R+   P G +       +PA YR  CP  S
Sbjct: 261 RFFGLPVGVTAAIPTSENPADYRYFCPDGS 290


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 9/29 (31%), Positives = 11/29 (37%)
 Frame = -1

Query: 601 DFCXARSGGXSLWKNASNAXFLRXLXFCW 515
           D C   SGG  LW+N      +      W
Sbjct: 343 DACQMDSGGPVLWQNPRTKRLVNIGIISW 371


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -1

Query: 745 GFPKGXKADRYSGKRQGRNREXARGSFQGET 653
           GFP   K ++    RQG      R S +G T
Sbjct: 427 GFPPRSKKNKLKKPRQGDGAAVKRKSREGST 457


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,811
Number of Sequences: 438
Number of extensions: 4204
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)