Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_I10
         (878 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC1672.09 |||triglyceride lipase-cholesterol esterase |Schizos...    96   7e-21
SPBC16A3.12c |||triglyceride lipase-cholesterol esterase |Schizo...    95   9e-21
SPBC14C8.15 |||triglyceride lipase-cholesterol esterase |Schizos...    80   5e-16
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||...    28   1.5  
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch...    27   3.5  
SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyce...    27   3.5  
SPBC16C6.08c |qcr6||ubiquinol-cytochrome-c reductase complex sub...    27   3.5  
SPAC4A8.09c |cwf21||complexed with Cdc5 protein Cwf21 |Schizosac...    26   6.1  
SPBC1703.04 |mlh1||MutL family protein Mlh1 |Schizosaccharomyces...    26   6.1  
SPBC28F2.09 |||transcription factor TFIIA complex large subunit ...    26   8.1  

>SPCC1672.09 |||triglyceride lipase-cholesterol esterase
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 467

 Score = 95.9 bits (228), Expect = 7e-21
 Identities = 42/122 (34%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
 Frame = +3

Query: 300 CLHGIVDSADTFILR--GQNSLAATLAREGYDVWAANTRGSTYSRRHVILXPSDKRFWEF 473
           C HG++ +++ ++     +N L   L  +GYDVW  N RG+ YSR+H+    +DK FW+F
Sbjct: 131 CHHGLLMNSEVWVCNVDPRNCLVFDLVNKGYDVWLGNNRGNKYSRQHLRFDSTDKEFWDF 190

Query: 474 TFHEVGYYDLPAFINHILKVNGVKKLSAVAHSQGNTNFYVLGATRPEYNEKVRVLTSLGP 653
           +  +   YD+P  I++ILK +G  KL+ +  SQG    +   +  P  N+K+  L +L P
Sbjct: 191 SIDDFAQYDIPDTIDYILKTSGQTKLTYIGFSQGTAQAFASLSIHPLLNDKINSLIALAP 250

Query: 654 GL 659
            +
Sbjct: 251 AI 252


>SPBC16A3.12c |||triglyceride lipase-cholesterol esterase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 443

 Score = 95.5 bits (227), Expect = 9e-21
 Identities = 39/120 (32%), Positives = 67/120 (55%), Gaps = 2/120 (1%)
 Frame = +3

Query: 300 CLHGIVDSADTFIL--RGQNSLAATLAREGYDVWAANTRGSTYSRRHVILXPSDKRFWEF 473
           C HG++ +++ ++     + SL   L   GYDVW  N RG+ YSR+H+   P D+ FW F
Sbjct: 119 CHHGLMTNSELWVAVNESERSLPFVLIESGYDVWLGNNRGNKYSRKHITYKPKDEEFWNF 178

Query: 474 TFHEVGYYDLPAFINHILKVNGVKKLSAVAHSQGNTNFYVLGATRPEYNEKVRVLTSLGP 653
           +  ++  +D+P  +++IL+  G +KL+ +  SQG        +  P+ N+KV +   L P
Sbjct: 179 SLDDMAMFDIPDTVDYILRETGREKLNYIGFSQGTAQAMAALSINPDLNDKVNIFIGLAP 238


>SPBC14C8.15 |||triglyceride lipase-cholesterol esterase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 460

 Score = 79.8 bits (188), Expect = 5e-16
 Identities = 33/121 (27%), Positives = 67/121 (55%), Gaps = 2/121 (1%)
 Frame = +3

Query: 303 LHGIVDSADTFI--LRGQNSLAATLAREGYDVWAANTRGSTYSRRHVILXPSDKRFWEFT 476
           +HG++ ++++++  L+ ++++   L  +GYDVW  N RG+ YS +++     + +FW+F+
Sbjct: 124 IHGLMMNSESWVCNLKKEDAIPFALVEQGYDVWLGNLRGNKYSIKNIKFSSQNPKFWDFS 183

Query: 477 FHEVGYYDLPAFINHILKVNGVKKLSAVAHSQGNTNFYVLGATRPEYNEKVRVLTSLGPG 656
              +  +D+P+ + +IL VN    +S V  SQG    +   +   E    VR   +L P 
Sbjct: 184 LDSIAIFDIPSIVKYILSVNSFDSISLVGFSQGAILAFAALSIDTELRNSVRAFIALAPA 243

Query: 657 L 659
           +
Sbjct: 244 I 244


>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 948

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
 Frame = +3

Query: 237 RKTVTYSKCFISKEIRGDQCSCL-HGIVDSADTFILRGQNSLAATLAREGYDVWAANTRG 413
           R  +     FI++ I    C  + HG+VDS   F++  ++S    LA    ++ ++  RG
Sbjct: 116 RNAILMESDFINQNILVQVCQPVRHGVVDSETKFVIERKDSF-TFLASNEKNI-SSFKRG 173

Query: 414 STYSRRHVILXPS 452
            T +   +++ PS
Sbjct: 174 KTETDAELVIRPS 186


>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
           Mok13|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 2358

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = -2

Query: 334 KVSAESTMPCKQEHWSPLISFDMKHFEYVTVFRLNVDLFN-RKSTFVT 194
           ++S  +++  +   W P +S  +KHF  + +  L+VD F   K+T +T
Sbjct: 266 QLSKFASVQDRLREWRPSVSEKLKHFACMIIAMLDVDGFRIDKATQIT 313


>SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 747

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 15/64 (23%), Positives = 28/64 (43%)
 Frame = -3

Query: 822 QIRTRITVSVXQYXMNFLSEGLKXSSSSNAKRTSLMTILLCIINSKTVGTYVRKPNRALK 643
           +++  I+  +  Y +N L E  K  +      TSL  + L +  +  +G Y + P   L 
Sbjct: 26  KLKDNISGDLLNYFLNLLEEISKLDTDQPLSVTSLRCLQLFVHLTFLLGVYTQLPKEMLS 85

Query: 642 TLKL 631
             K+
Sbjct: 86  QAKI 89


>SPBC16C6.08c |qcr6||ubiquinol-cytochrome-c reductase complex
           subunit 8|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 214

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -2

Query: 739 ERQEDFVDDYFALYH*FKDC 680
           ++ ED ++++F LYH  +DC
Sbjct: 185 DKSEDCIEEFFHLYHCARDC 204


>SPAC4A8.09c |cwf21||complexed with Cdc5 protein Cwf21
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 293

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +1

Query: 226 RRSDGRRLHTQNVSYQRR*EATSAPAYTASWIQPIL 333
           RR   R    +  SY RR E +++P+YT +   P++
Sbjct: 246 RRDYNRHDERERYSYHRRRERSNSPSYTKNESIPVV 281


>SPBC1703.04 |mlh1||MutL family protein Mlh1 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 684

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = +3

Query: 507 AFINHILKVNGVKKLSAVAHSQGNTNFYVLGATRP 611
           A I+H+ KV  V KLS+  H+     FYV GA  P
Sbjct: 106 ASISHVAKVTVVTKLSSDIHAW--KAFYVDGALAP 138


>SPBC28F2.09 |||transcription factor TFIIA complex large subunit
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 369

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +3

Query: 513 INHILKVNGVKKLSAVAHSQGNTNFY 590
           +N+I  +  V+++   A   GN+N+Y
Sbjct: 94  LNNIAAIRAVQQMDTFAQQHGNSNYY 119


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,014,252
Number of Sequences: 5004
Number of extensions: 57315
Number of successful extensions: 158
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 158
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 440481800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)