Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_I07
         (843 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC034633-1|AAH34633.1|  129|Homo sapiens CLK4 protein protein.         31   6.9  
AF294429-1|AAG10074.1|  481|Homo sapiens protein serine threonin...    31   6.9  

>BC034633-1|AAH34633.1|  129|Homo sapiens CLK4 protein protein.
          Length = 129

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 10/18 (55%), Positives = 16/18 (88%)
 Frame = -1

Query: 123 QQKRSNPKAERHRHCSNH 70
           + +RS+PK +R+RHCS+H
Sbjct: 107 RSRRSSPKRKRNRHCSSH 124


>AF294429-1|AAG10074.1|  481|Homo sapiens protein serine threonine
           kinase Clk4 protein.
          Length = 481

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 10/18 (55%), Positives = 16/18 (88%)
 Frame = -1

Query: 123 QQKRSNPKAERHRHCSNH 70
           + +RS+PK +R+RHCS+H
Sbjct: 107 RSRRSSPKRKRNRHCSSH 124


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,467,304
Number of Sequences: 237096
Number of extensions: 1433124
Number of successful extensions: 2476
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2461
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10649685938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)