Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_I07
         (843 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50198-3|AAA91261.2|  503|Caenorhabditis elegans Hypothetical pr...    31   0.78 
AC024785-6|AAF60605.2|  467|Caenorhabditis elegans C-type lectin...    31   0.78 
Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical p...    29   5.5  
AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical ...    29   5.5  
AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical ...    29   5.5  

>U50198-3|AAA91261.2|  503|Caenorhabditis elegans Hypothetical
           protein R04B3.3 protein.
          Length = 503

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 14/28 (50%), Positives = 15/28 (53%)
 Frame = +2

Query: 74  FEQCLCLSAFGFDRFCCCFWRELGSGRW 157
           FE CL LS    D   C FWR  G+ RW
Sbjct: 335 FESCLALSCNPSD-LSCKFWRSSGNNRW 361


>AC024785-6|AAF60605.2|  467|Caenorhabditis elegans C-type lectin
           protein 74 protein.
          Length = 467

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
 Frame = +3

Query: 159 TLTFTAVFPSISDLQLGNAE--VFSYVHEINPKFILGPLLSFSLDSETQS 302
           ++T T   P  S+ Q+G  +  +F+Y +++NP  ++  L   SLDS+  S
Sbjct: 155 SVTKTTTTPDSSNCQVGGPQTVLFAYSNDLNPFIVMDTLQRSSLDSQNVS 204


>Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical
            protein C24F3.5 protein.
          Length = 1479

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +3

Query: 45   IVGFISSKCGLNSACAFQLLGLIASAVAFGENLDPADGTLTFTAVF 182
            ++ F+S  C LN   + Q+L    +A   GE+L+   GT+T   +F
Sbjct: 1045 LIQFVSWSCMLNPPSSLQVLAAFLNA---GESLEKNSGTITSLILF 1087


>AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical
            protein C24F3.5 protein.
          Length = 1479

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +3

Query: 45   IVGFISSKCGLNSACAFQLLGLIASAVAFGENLDPADGTLTFTAVF 182
            ++ F+S  C LN   + Q+L    +A   GE+L+   GT+T   +F
Sbjct: 1045 LIQFVSWSCMLNPPSSLQVLAAFLNA---GESLEKNSGTITSLILF 1087


>AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical
            protein C24F3.5 protein.
          Length = 1479

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +3

Query: 45   IVGFISSKCGLNSACAFQLLGLIASAVAFGENLDPADGTLTFTAVF 182
            ++ F+S  C LN   + Q+L    +A   GE+L+   GT+T   +F
Sbjct: 1045 LIQFVSWSCMLNPPSSLQVLAAFLNA---GESLEKNSGTITSLILF 1087


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,287,235
Number of Sequences: 27780
Number of extensions: 224579
Number of successful extensions: 495
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 494
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)