Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_I02
(1276 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 39 0.001
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.012
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 35 0.021
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 35 0.028
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.064
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.45
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.59
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 30 0.79
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 29 1.4
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 1.8
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 3.2
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 4.2
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 4.2
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 27 5.5
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 7.3
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 26 9.7
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 39.1 bits (87), Expect = 0.001
Identities = 26/77 (33%), Positives = 31/77 (40%)
Frame = +2
Query: 692 PPPPXLXXXPXPPXXAXXXLLAXPXXXPSPPXXAPDRXTXPXPPXPRPSRXPPXPXXSDX 871
PP P P P + + A P PS P + + PP P PS PP P S
Sbjct: 1112 PPVPAPSGAPPVPKPS---VAAPPVPVPSGAPPVP-KPSVAAPPVPAPSGAPPVPKPSVA 1167
Query: 872 PPPXVIFXPSXSXPPXP 922
PP + PS PP P
Sbjct: 1168 APP--VPAPSSGIPPVP 1182
Score = 37.9 bits (84), Expect = 0.003
Identities = 30/105 (28%), Positives = 37/105 (35%), Gaps = 5/105 (4%)
Frame = +2
Query: 638 NTPPAXPLXXXHPXKXXXPPPPX--LXXXPXPPXXAXXXLLAXPXXXPSPPXXAPD--RX 805
+TPP P P P + P P + P P AP +
Sbjct: 1048 STPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKP 1107
Query: 806 TXPXPPXPRPSRXPPXPXXSDXPPPXVIFXPSXSXP-PXPXVRXP 937
+ PP P PS PP P S PP + PS + P P P V P
Sbjct: 1108 SVAVPPVPAPSGAPPVPKPSVAAPPVPV--PSGAPPVPKPSVAAP 1150
Score = 35.9 bits (79), Expect = 0.012
Identities = 24/77 (31%), Positives = 28/77 (36%)
Frame = +2
Query: 692 PPPPXLXXXPXPPXXAXXXLLAXPXXXPSPPXXAPDRXTXPXPPXPRPSRXPPXPXXSDX 871
PP P P P + + A P PS + PP P PS PP P S
Sbjct: 1150 PPVPAPSGAPPVPKPS---VAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVG 1206
Query: 872 PPPXVIFXPSXSXPPXP 922
PP P + PP P
Sbjct: 1207 VPP---VPPPSTAPPVP 1220
Score = 35.5 bits (78), Expect = 0.016
Identities = 23/76 (30%), Positives = 28/76 (36%)
Frame = +2
Query: 695 PPPXLXXXPXPPXXAXXXLLAXPXXXPSPPXXAPDRXTXPXPPXPRPSRXPPXPXXSDXP 874
P P P P A + P P P + + PP P PS PP P S
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVP-----KPSVGVPPVPPPSTAPPVPTPSAGL 1226
Query: 875 PPXVIFXPSXSXPPXP 922
PP + P+ PP P
Sbjct: 1227 PPVPV--PTAKAPPVP 1240
Score = 34.3 bits (75), Expect = 0.037
Identities = 28/88 (31%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Frame = +2
Query: 692 PPPPXLXXXPXPPXXAXXXLLAXPXXXPSPPXXAPDRXTXPXPPXPRPSRX-PPXPXXSD 868
PP P P P + + A P PS P + + PP P PS PP P +
Sbjct: 1131 PPVPVPSGAPPVPKPS---VAAPPVPAPSGAPPVP-KPSVAAPPVPAPSSGIPPVPKPAA 1186
Query: 869 XPPPXVIFXPSXSXP-PXPXVRXPXXXP 949
PP + PS + P P P V P P
Sbjct: 1187 GVPP--VPPPSEAPPVPKPSVGVPPVPP 1212
Score = 32.7 bits (71), Expect = 0.11
Identities = 31/105 (29%), Positives = 34/105 (32%), Gaps = 5/105 (4%)
Frame = +2
Query: 638 NTPPAXPLXXXHPXKXXXP--PPPXLXXXPXPPXXAXXXLLAXPXXXPSPPXXAPDRXTX 811
+T PA PL P PP L PP P +PP
Sbjct: 1001 STSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAP 1060
Query: 812 PXPPX-PRPS-RXPPXPXXSDXPPPXVIFXPSXSXP-PXPXVRXP 937
PP P PS P P S PP + PS P P P V P
Sbjct: 1061 SAPPPVPAPSSEIPSIPAPSGAPP---VPAPSGIPPVPKPSVAAP 1102
Score = 31.9 bits (69), Expect = 0.19
Identities = 21/68 (30%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Frame = +2
Query: 725 PPXXAXXXLLAXPXXXPSP--PXXAPDRXTXPXPPXPRPSRXPPXPXXSDXPPPXVIFXP 898
PP +L+ P P P AP P +R PP P S PP + P
Sbjct: 970 PPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPL--P 1027
Query: 899 SXSXPPXP 922
S PP P
Sbjct: 1028 SADAPPIP 1035
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 642 PPPXXPSXXXTPXXAXPPPPPXSRXXPPPPP 734
PPP P PP PP S P P P
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 27.5 bits (58), Expect = 4.2
Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Frame = +1
Query: 1009 PGQXPP-PXPXPXRXXXXPPXT*PPXHXXPQXXPPPPXPXXXXRP 1140
P + PP P P PP T PP PP P P P
Sbjct: 1194 PSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 27.5 bits (58), Expect = 4.2
Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = +3
Query: 642 PPPXXPSXXXTPXXAXPP-PPPXSRXXPPPPPXXXPXSSXCP 764
PPP TP PP P P ++ P P P S P
Sbjct: 1211 PPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTP 1252
Score = 26.6 bits (56), Expect = 7.3
Identities = 28/91 (30%), Positives = 30/91 (32%), Gaps = 6/91 (6%)
Frame = +2
Query: 647 PAXPLXXXHPXKXXXP-PPPXLXXXPXPPXXAXXXLLAXPXXXPS---PPXXAPDRXTXP 814
PA + P P P P + P PP A P PS PP P T
Sbjct: 1184 PAAGVPPVPPPSEAPPVPKPSVGVPPVPPPST-----APPVPTPSAGLPPVPVP---TAK 1235
Query: 815 XPPXPRPSRXPP--XPXXSDXPPPXVIFXPS 901
PP P PS P S P P PS
Sbjct: 1236 APPVPAPSSEAPSVSTPRSSVPSPHSNASPS 1266
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.9 bits (79), Expect = 0.012
Identities = 24/85 (28%), Positives = 31/85 (36%), Gaps = 3/85 (3%)
Frame = +2
Query: 692 PPPPXLXXXPXPPXXAXXXLLAXPXXXPSPPXXAPDRXTXPXPPXPRPSRXPPXP---XX 862
PPPP PP + P P PP + + P PP R + PP P
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPP--PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPS 371
Query: 863 SDXPPPXVIFXPSXSXPPXPXVRXP 937
+ PP + + S PP P P
Sbjct: 372 TGRQPPPLSSSRAVSNPPAPPPAIP 396
Score = 31.9 bits (69), Expect = 0.19
Identities = 26/102 (25%), Positives = 28/102 (27%), Gaps = 2/102 (1%)
Frame = +2
Query: 638 NTPPAXPLXXXHPXKXXXPPPPXLXXXPXPPXXAXXXL--LAXPXXXPSPPXXAPDRXTX 811
+ PPA P PP PP L A P PS P P
Sbjct: 386 SNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPA 445
Query: 812 PXPPXPRPSRXPPXPXXSDXPPPXVIFXPSXSXPPXPXVRXP 937
P P PP P PP P+ P P P
Sbjct: 446 APPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 31.1 bits (67), Expect = 0.34
Identities = 25/85 (29%), Positives = 27/85 (31%), Gaps = 2/85 (2%)
Frame = +1
Query: 1009 PGQXPPPXPXPXRXXXX--PPXT*PPXHXXPQXXPPPPXPXXXXRPXGXXLXPPLXXXLS 1182
PG+ P P PP PP P P P P G PPL
Sbjct: 396 PGRSAPALPPLGNASRTSTPPVPTPPS-LPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAP 454
Query: 1183 XSPXX*AXXXKTPXSPPXXPPXAPP 1257
+P A P PP P APP
Sbjct: 455 IAPPLPAGMPAAPPLPPAAP--APP 477
Score = 30.7 bits (66), Expect = 0.45
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +3
Query: 645 PPXXPSXXXTPXXAXPPPPPXSRXXPPPPPXXXPXSSXCP 764
PP P + P PP PPPPP P + P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQP 376
Score = 26.2 bits (55), Expect = 9.7
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = +3
Query: 630 GXXTPPPXXPSXXXTPXXAXPPPPPXSRXX--PPPPPXXXPXSS 755
G PPP P + PPP SR PP PP P S
Sbjct: 357 GRSAPPPPPPRSAPSTGRQ-PPPLSSSRAVSNPPAPPPAIPGRS 399
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 35.1 bits (77), Expect = 0.021
Identities = 19/61 (31%), Positives = 23/61 (37%)
Frame = +2
Query: 638 NTPPAXPLXXXHPXKXXXPPPPXLXXXPXPPXXAXXXLLAXPXXXPSPPXXAPDRXTXPX 817
+TPP P P PPP P PP + + A P P PP A + P
Sbjct: 1688 STPPVRPQSAAPPQMSAPTPPPPPMSVPPPP--SAPPMPAGPPSAPPPPLPASSAPSVPN 1745
Query: 818 P 820
P
Sbjct: 1746 P 1746
Score = 34.7 bits (76), Expect = 0.028
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +1
Query: 1009 PGQXPPPXPXPXRXXXXPPXT*PPXHXXPQXXPPPPXP 1122
P Q P P P PP + PP P PPPP P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 32.3 bits (70), Expect = 0.15
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 645 PPXXPSXXXTPXXAXPPPPPXSRXXPPPP 731
PP P P + P PPP PPPP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPP 1718
Score = 32.3 bits (70), Expect = 0.15
Identities = 19/53 (35%), Positives = 21/53 (39%)
Frame = +2
Query: 779 PPXXAPDRXTXPXPPXPRPSRXPPXPXXSDXPPPXVIFXPSXSXPPXPXVRXP 937
P AP + + P PP P P PP P PP PS PP P P
Sbjct: 1694 PQSAAPPQMSAPTPPPP-PMSVPPPPSA----PPMPAGPPSAPPPPLPASSAP 1741
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 642 PPPXXPSXXXTPXXAXPPPPPXSRXXPPPPP 734
PPP P P A PPP P S P P
Sbjct: 1716 PPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/62 (25%), Positives = 20/62 (32%)
Frame = +2
Query: 695 PPPXLXXXPXPPXXAXXXLLAXPXXXPSPPXXAPDRXTXPXPPXPRPSRXPPXPXXSDXP 874
P + P P A ++ P P P P P P P + PP P S
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPS 1742
Query: 875 PP 880
P
Sbjct: 1743 VP 1744
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +2
Query: 818 PPXPRPSRXPPXPXXSDXPPPXVIFXPSXSXPPXP 922
PP S PP PPP + P S PP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMP 1724
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 639 TPPPXXPSXXXTPXXAXPPPPPXSRXXPPPP 731
TPPP P P + PP P PPPP
Sbjct: 1706 TPPP--PPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.2 bits (55), Expect = 9.7
Identities = 11/34 (32%), Positives = 13/34 (38%)
Frame = +3
Query: 645 PPXXPSXXXTPXXAXPPPPPXSRXXPPPPPXXXP 746
PP + P PPPP + P PP P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 34.7 bits (76), Expect = 0.028
Identities = 22/82 (26%), Positives = 27/82 (32%), Gaps = 1/82 (1%)
Frame = +2
Query: 674 PXKXXXPPPPXLXXXPXPPXXAXXXLLAXPXXXPSPPXXA-PDRXTXPXPPXPRPSRXPP 850
P + PPP P P P P+ P + P + P P P + PP
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Query: 851 XPXXSDXPPPXVIFXPSXSXPP 916
P S P PS PP
Sbjct: 204 -PPLSQAPVANTSSRPSSFAPP 224
Score = 31.1 bits (67), Expect = 0.34
Identities = 18/54 (33%), Positives = 21/54 (38%)
Frame = +2
Query: 755 AXPXXXPSPPXXAPDRXTXPXPPXPRPSRXPPXPXXSDXPPPXVIFXPSXSXPP 916
A P P+PP + P PRPS PP P + P PS PP
Sbjct: 122 AAPPSAPAPPTPQSE-LRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Score = 29.9 bits (64), Expect = 0.79
Identities = 21/78 (26%), Positives = 21/78 (26%), Gaps = 1/78 (1%)
Frame = +2
Query: 647 PAXPLXXXHPXKXXXPPPPXLXXXPXPPXXAXXXLLAXPXXXPSPPXXAPDRXTXPXPPX 826
PA P PP P P A P PP P P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 827 PR-PSRXPPXPXXSDXPP 877
P PS PP P PP
Sbjct: 188 PSLPSAVPPMPPKVPPPP 205
Score = 29.5 bits (63), Expect = 1.0
Identities = 24/82 (29%), Positives = 24/82 (29%), Gaps = 2/82 (2%)
Frame = +2
Query: 698 PPXLXXXPXPPXXAXXXLLAXPXXXPSPPXXAPDRXTXPXPPXPRPSRXPP--XPXXSDX 871
PP P P A P PP A P P PS PP P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPA-SAPPIPSKAPPIPSSLPPPAQPAAPVK 182
Query: 872 PPPXVIFXPSXSXPPXPXVRXP 937
PP PS P P V P
Sbjct: 183 SPPSAPSLPSAVPPMPPKVPPP 204
Score = 29.5 bits (63), Expect = 1.0
Identities = 25/81 (30%), Positives = 29/81 (35%), Gaps = 2/81 (2%)
Frame = +1
Query: 1021 PPPXPXPX--RXXXXPPXT*PPXHXXPQXXPPPPXPXXXXRPXGXXLXPPLXXXLSXSPX 1194
PP P P + PP + PP P PP P P PP+ L P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPP---RPSIPPPSP----ASAPPIPSKAPPIPSSL-PPPA 175
Query: 1195 X*AXXXKTPXSPPXXPPXAPP 1257
A K+P S P P PP
Sbjct: 176 QPAAPVKSPPSAPSLPSAVPP 196
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 4/45 (8%)
Frame = +3
Query: 642 PPPXXPSXXXTPXXAXPP----PPPXSRXXPPPPPXXXPXSSXCP 764
P P P P + PP PPP PP P P S P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLP 172
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.5 bits (73), Expect = 0.064
Identities = 24/72 (33%), Positives = 24/72 (33%)
Frame = +2
Query: 707 LXXXPXPPXXAXXXLLAXPXXXPSPPXXAPDRXTXPXPPXPRPSRXPPXPXXSDXPPPXV 886
L P PP A P P PP AP P PP P P P PPP V
Sbjct: 728 LLKSPPPPPPAVIVPTPAPAPIPVPPP-APIMG-GPPPPPPPPGVAGAGPPPPPPPPPAV 785
Query: 887 IFXPSXSXPPXP 922
S P P
Sbjct: 786 SAGGSRYYAPAP 797
Score = 33.5 bits (73), Expect = 0.064
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +1
Query: 1006 TPGQXPPPXPXPXRXXXXPPXT*PPXHXXPQXXPPPPXPXXXXRPXGXXLXPP 1164
TP P P P P PP PP PPPP P G P
Sbjct: 743 TPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAP 795
Score = 32.3 bits (70), Expect = 0.15
Identities = 18/68 (26%), Positives = 22/68 (32%)
Frame = +2
Query: 644 PPAXPLXXXHPXKXXXPPPPXLXXXPXPPXXAXXXLLAXPXXXPSPPXXAPDRXTXPXPP 823
PPA + P PPP + P PP A P P PP + P
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAP 795
Query: 824 XPRPSRXP 847
P+ P
Sbjct: 796 APQAEPEP 803
Score = 31.5 bits (68), Expect = 0.26
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Frame = +3
Query: 639 TPPPXXPSXXX-TPXXAX---PPPPPXSRXXPPPPP 734
+PPP P+ TP A PPP P PPPPP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP 766
Score = 30.3 bits (65), Expect = 0.59
Identities = 17/54 (31%), Positives = 19/54 (35%), Gaps = 5/54 (9%)
Frame = +2
Query: 692 PPPPXLXXXPXP-----PXXAXXXLLAXPXXXPSPPXXAPDRXTXPXPPXPRPS 838
PPPP P P P ++ P P PP A P PP P S
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVS 786
Score = 30.3 bits (65), Expect = 0.59
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +3
Query: 642 PPPXXPSXXXTPXXAXPPPPP-XSRXXPPPPPXXXPXSS 755
P P P PPPPP + PPPPP P S
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVS 786
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +2
Query: 812 PXPPXPRPSRXPPXPXXSDXPPPXVIFXPSXSXPPXPXVRXPXXXP 949
P PP P P P PPP I PP P V P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/33 (39%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Frame = +3
Query: 642 PPPXX--PSXXXTPXXAXPPPPPXSRXXPPPPP 734
PPP P+ P PP P PPPPP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 28.7 bits (61), Expect = 1.8
Identities = 18/55 (32%), Positives = 20/55 (36%)
Frame = +2
Query: 773 PSPPXXAPDRXTXPXPPXPRPSRXPPXPXXSDXPPPXVIFXPSXSXPPXPXVRXP 937
P PP A T P P P PP P PPP + + PP P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVP---PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.9 bits (59), Expect = 3.2
Identities = 21/62 (33%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Frame = +2
Query: 749 LLAXPXXXPSPPXXAPDRXTXPXP-PXPRPSRXPPXPXXSDXPPPXVI-FXPSXSXPPXP 922
LL P P P P P P P P P P PPP V P PP P
Sbjct: 727 LLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP---PPPGVAGAGPPPPPPPPP 783
Query: 923 XV 928
V
Sbjct: 784 AV 785
Score = 26.6 bits (56), Expect = 7.3
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +3
Query: 690 PPPPPXSRXXPPPPPXXXPXSSXCP 764
PPPPP + P P P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAP 756
Score = 26.6 bits (56), Expect = 7.3
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +3
Query: 630 GXXTPPPXXPSXXXTPXXAXPPPPPXSRXXPPPP 731
G PPP P A PPPPP PPPP
Sbjct: 759 GGPPPPPPPPGV----AGAGPPPPP-----PPPP 783
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 30.7 bits (66), Expect = 0.45
Identities = 22/62 (35%), Positives = 22/62 (35%)
Frame = -2
Query: 879 GGGXSXXXGXGGXRDGRGXGGXGXVXLSGAXXGGEGXXXGXARRXXXAXXGGXGXXXXWG 700
GG G GG GRG G G GA GG G G R GG G
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGR---GGARGGGRGGARG-GRGGRGGARGGRGGSSGGR 64
Query: 699 GG 694
GG
Sbjct: 65 GG 66
Score = 29.9 bits (64), Expect = 0.79
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = -2
Query: 855 GXGGXRDGRGXGGXGXVXLSGAXXGGEGXXXGXARRXXXAXXGGXGXXXXWGGGGXXXXX 676
G GG R GRG G G GG G G R GG G GG
Sbjct: 10 GRGGSRGGRGGFNGGR----GGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
Query: 675 G 673
G
Sbjct: 66 G 66
Score = 27.5 bits (58), Expect = 4.2
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -1
Query: 745 GXXXGGGGGXXREXGGGGGXALXGVXXXEGXXGGGVXXPKXI 620
G GGG G R GG G A G G GG K I
Sbjct: 33 GGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGAKVI 74
Score = 26.2 bits (55), Expect = 9.7
Identities = 19/41 (46%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Frame = -3
Query: 755 RGG--GXXRGXGGXXXXXXGGG-GGXRXXGGGXXXGXXRGG 642
RGG G G GG GGG GG R GG G RGG
Sbjct: 18 RGGFNGGRGGFGGGRGGARGGGRGGARGGRGGR--GGARGG 56
Score = 26.2 bits (55), Expect = 9.7
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -2
Query: 948 GXXXGXRTXGXGGXEXDGXKMTXGGGXSXXXGXGGXRDGRGXGGXG 811
G G R G GG GG G GG R GRG G
Sbjct: 19 GGFNGGR-GGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 30.3 bits (65), Expect = 0.59
Identities = 24/80 (30%), Positives = 25/80 (31%), Gaps = 1/80 (1%)
Frame = -2
Query: 879 GGGXSXXXGXGGXRDGRGX-GGXGXVXLSGAXXGGEGXXXGXARRXXXAXXGGXGXXXXW 703
GG G GG G G GG G G GG G G G G +
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGF 247
Query: 702 GGGGXXXXXGWXXXRGXAGG 643
GGG G G GG
Sbjct: 248 GGGLGGFGGGPGGFGGGPGG 267
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 29.9 bits (64), Expect = 0.79
Identities = 25/103 (24%), Positives = 28/103 (27%), Gaps = 1/103 (0%)
Frame = +2
Query: 647 PAXPLXXXHPXKXXXPPPPXLXXXPXPPXXAXXXLLAXPXXXPSPPXXAPDRXTXPXPPX 826
P P+ P P P + P P PS P P
Sbjct: 605 PQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQRPAVPVVPEAPSV 664
Query: 827 PRPSRXPPXPXXSDXP-PPXVIFXPSXSXPPXPXVRXPXXXPH 952
P+P P P P PP V P P V P PH
Sbjct: 665 PQPPAAPVVPEVPSVPQPPAVPVVPEAGQLNEPVV--PPLPPH 705
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 29.1 bits (62), Expect = 1.4
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +3
Query: 672 TPXXAXPPPPPXSRXXPPPPPXXXPXSSXCP 764
TP P P P + PPPPP S P
Sbjct: 728 TPAPPTPAPTPAVKHHPPPPPVRSSISPSMP 758
Score = 27.5 bits (58), Expect = 4.2
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +3
Query: 639 TPPPXXPSXXXTPXXAXPPPPPXSRXXPPPPP 734
TP P P+ PPPP S P PP
Sbjct: 728 TPAPPTPAPTPAVKHHPPPPPVRSSISPSMPP 759
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -3
Query: 749 GGXXRGXGGXXXXXXGG-GGGXRXXGGGXXXGXXRGG 642
GG GG GG GGG R GG G RGG
Sbjct: 145 GGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGG 181
Score = 28.3 bits (60), Expect = 2.4
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = -3
Query: 755 RGGGXXRGXGGXXXXXXGG-GGGXRXXGGGXXXGXXRGG 642
RGG GG GG GGG R G G RGG
Sbjct: 151 RGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.9 bits (59), Expect = 3.2
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 642 PPPXXPSXXXTPXXAXPPPPP 704
PPP P P PPPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
Score = 27.9 bits (59), Expect = 3.2
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 642 PPPXXPSXXXTPXXAXPPPPP 704
PPP P P PPPPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 2/26 (7%)
Frame = +3
Query: 675 PXXAXPPPPPXSRXXPP--PPPXXXP 746
P PPPPP PP PPP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 643 PPRXXPXXXPPPXXRXPPPPP 705
PP P PP PPPPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 1060 PPXT*PPXHXXPQXXPPPPXP 1122
PP PP P PPPP P
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 9.7
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +3
Query: 699 PPXSRXXPPPPPXXXPXSSXCP 764
PP + PPPPP P S P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPP 26
Score = 26.2 bits (55), Expect = 9.7
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 1060 PPXT*PPXHXXPQXXPPPPXP 1122
PP PP P PPPP P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +1
Query: 1009 PGQXPPPXPXPXRXXXXPPXT*PPXHXXPQXXPPPP 1116
PG+ PP P + P PP H P PPP
Sbjct: 203 PGEHMPPPPMHHKPGEHMPP--PPMHHEPGEHMPPP 236
Score = 27.5 bits (58), Expect = 4.2
Identities = 22/87 (25%), Positives = 25/87 (28%), Gaps = 6/87 (6%)
Frame = +2
Query: 695 PPPXLXXXPXPPXXAXXXLLAXPXXXPSPPXX-APDRXTXPXPPXPRPSRX-PPXPXXSD 868
PPP + P P PP P P P P PP P +
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 267
Query: 869 X----PPPXVIFXPSXSXPPXPXVRXP 937
PPP + P PP P P
Sbjct: 268 PGEHMPPPPMHHEPGEHMPPPPMHHEP 294
Score = 27.5 bits (58), Expect = 4.2
Identities = 22/87 (25%), Positives = 25/87 (28%), Gaps = 6/87 (6%)
Frame = +2
Query: 695 PPPXLXXXPXPPXXAXXXLLAXPXXXPSPPXX-APDRXTXPXPPXPRPSRX-PPXPXXSD 868
PPP + P P PP P P P P PP P +
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 280
Query: 869 X----PPPXVIFXPSXSXPPXPXVRXP 937
PPP + P PP P P
Sbjct: 281 PGEHMPPPPMHHEPGEHMPPPPMHHEP 307
Score = 27.5 bits (58), Expect = 4.2
Identities = 22/87 (25%), Positives = 25/87 (28%), Gaps = 6/87 (6%)
Frame = +2
Query: 695 PPPXLXXXPXPPXXAXXXLLAXPXXXPSPPXX-APDRXTXPXPPXPRPSRX-PPXPXXSD 868
PPP + P P PP P P P P PP P +
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 293
Query: 869 X----PPPXVIFXPSXSXPPXPXVRXP 937
PPP + P PP P P
Sbjct: 294 PGEHMPPPPMHHEPGEHMPPPPMHHEP 320
Score = 27.5 bits (58), Expect = 4.2
Identities = 22/87 (25%), Positives = 25/87 (28%), Gaps = 6/87 (6%)
Frame = +2
Query: 695 PPPXLXXXPXPPXXAXXXLLAXPXXXPSPPXX-APDRXTXPXPPXPRPSRX-PPXPXXSD 868
PPP + P P PP P P P P PP P +
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 306
Query: 869 X----PPPXVIFXPSXSXPPXPXVRXP 937
PPP + P PP P P
Sbjct: 307 PGEHMPPPPMHHEPGEHMPPPPMHHEP 333
Score = 26.6 bits (56), Expect = 7.3
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 1009 PGQXPPPXPXPXRXXXXPPXT*PPXHXXPQXXPPPP 1116
PG+ PP P P PP H P PPP
Sbjct: 216 PGEHMPPPPMHHEPGEHMPP--PPMHHEPGEHMPPP 249
Score = 26.6 bits (56), Expect = 7.3
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 1009 PGQXPPPXPXPXRXXXXPPXT*PPXHXXPQXXPPPP 1116
PG+ PP P P PP H P PPP
Sbjct: 229 PGEHMPPPPMHHEPGEHMPP--PPMHHEPGEHMPPP 262
Score = 26.6 bits (56), Expect = 7.3
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 1009 PGQXPPPXPXPXRXXXXPPXT*PPXHXXPQXXPPPP 1116
PG+ PP P P PP H P PPP
Sbjct: 242 PGEHMPPPPMHHEPGEHMPP--PPMHHEPGEHMPPP 275
Score = 26.6 bits (56), Expect = 7.3
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 1009 PGQXPPPXPXPXRXXXXPPXT*PPXHXXPQXXPPPP 1116
PG+ PP P P PP H P PPP
Sbjct: 255 PGEHMPPPPMHHEPGEHMPP--PPMHHEPGEHMPPP 288
Score = 26.6 bits (56), Expect = 7.3
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 1009 PGQXPPPXPXPXRXXXXPPXT*PPXHXXPQXXPPPP 1116
PG+ PP P P PP H P PPP
Sbjct: 268 PGEHMPPPPMHHEPGEHMPP--PPMHHEPGEHMPPP 301
Score = 26.6 bits (56), Expect = 7.3
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 1009 PGQXPPPXPXPXRXXXXPPXT*PPXHXXPQXXPPPP 1116
PG+ PP P P PP H P PPP
Sbjct: 281 PGEHMPPPPMHHEPGEHMPP--PPMHHEPGEHMPPP 314
Score = 26.6 bits (56), Expect = 7.3
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 1009 PGQXPPPXPXPXRXXXXPPXT*PPXHXXPQXXPPPP 1116
PG+ PP P P PP H P PPP
Sbjct: 294 PGEHMPPPPMHHEPGEHMPP--PPMHHEPGEHMPPP 327
Score = 26.6 bits (56), Expect = 7.3
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 1009 PGQXPPPXPXPXRXXXXPPXT*PPXHXXPQXXPPPP 1116
PG+ PP P P PP H P PPP
Sbjct: 307 PGEHMPPPPMHHEPGEHMPP--PPMHHEPGEHMPPP 340
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.5 bits (58), Expect = 4.2
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +3
Query: 642 PPPXXPSXXXTPXXAXPPPPPXSRXXPPP 728
PPP P A PPPP PP
Sbjct: 910 PPPTASMTASAPAIASPPPPKVGETYHPP 938
Score = 27.5 bits (58), Expect = 4.2
Identities = 18/73 (24%), Positives = 20/73 (27%)
Frame = +2
Query: 719 PXPPXXAXXXLLAXPXXXPSPPXXAPDRXTXPXPPXPRPSRXPPXPXXSDXPPPXVIFXP 898
P P A + P P + P P PS P P S PP P
Sbjct: 1010 PPPKQPANRVVPLPPTASQRASAYEPPTVSVPSPSALSPSVTPQLPPVSSRLPPVSATRP 1069
Query: 899 SXSXPPXPXVRXP 937
PP P
Sbjct: 1070 QIPQPPPVSTALP 1082
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 27.1 bits (57), Expect = 5.5
Identities = 17/66 (25%), Positives = 20/66 (30%)
Frame = +2
Query: 641 TPPAXPLXXXHPXKXXXPPPPXLXXXPXPPXXAXXXLLAXPXXXPSPPXXAPDRXTXPXP 820
T P PL K PPPP P P + + P P T
Sbjct: 267 TTPQGPLMINDLGKTTAPPPPHGSTTPLPAAASYTSMNMKQSSASHPVLQPPAPSTLQFN 326
Query: 821 PXPRPS 838
P P P+
Sbjct: 327 PSPSPA 332
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +3
Query: 630 GXXTPPPXXPSXXXTPXXAXPPPPPXSRXXPPPPPXXXPXSS 755
G P P+ TP A P P P PPPPP P S+
Sbjct: 216 GRAVSPEIPPTY--TPKQADPLPAPP----PPPPPTLPPQST 251
Score = 26.2 bits (55), Expect = 9.7
Identities = 18/70 (25%), Positives = 22/70 (31%), Gaps = 2/70 (2%)
Frame = +2
Query: 647 PAXPLXXXHPXKXXXPPPPXLXXXPXPPXXAXXXLLAXPXXXPS-PPXXAPDRXTX-PXP 820
PA L + PPPP + + P PP P + P P
Sbjct: 179 PATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAP 238
Query: 821 PXPRPSRXPP 850
P P P PP
Sbjct: 239 PPPPPPTLPP 248
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 26.2 bits (55), Expect = 9.7
Identities = 17/65 (26%), Positives = 22/65 (33%), Gaps = 2/65 (3%)
Frame = +2
Query: 761 PXXXPSPPXXAPDRXTXPX--PPXPRPSRXPPXPXXSDXPPPXVIFXPSXSXPPXPXVRX 934
P P+ P AP P PP +P++ + P F P S P P
Sbjct: 440 PWQQPAAPQSAPALSMNPSSLPPWQQPTQQSAVQPSNLVPSQNAPFIPGTSAPLPPTTFA 499
Query: 935 PXXXP 949
P P
Sbjct: 500 PPGVP 504
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,845,815
Number of Sequences: 5004
Number of extensions: 26183
Number of successful extensions: 479
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 286
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 693525122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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