BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_I02
(1276 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 25 1.1
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 24 2.5
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 24 2.5
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 22 9.9
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 22 9.9
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 22 9.9
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 22 9.9
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 22 9.9
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 22 9.9
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 22 9.9
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 9.9
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 9.9
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 9.9
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 9.9
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 9.9
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 9.9
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 9.9
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 9.9
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 9.9
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 25.4 bits (53), Expect = 1.1
Identities = 13/43 (30%), Positives = 15/43 (34%)
Frame = +2
Query: 761 PXXXPSPPXXAPDRXTXPXPPXPRPSRXPPXPXXSDXPPPXVI 889
P P AP R + P P P PP S P +I
Sbjct: 23 PQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNPSQMMI 65
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 24.2 bits (50), Expect = 2.5
Identities = 18/62 (29%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Frame = +2
Query: 779 PPXXAPDRXTXPXPPXPRPSRXPPXPXXSDXPPPXVIFXPSXSXPPXPXV-RXPXXXPHT 955
P P P PP PR R P ++ P ++ P PP P + R P P
Sbjct: 98 PGNNRPVYIPQPRPPHPRLRREPEAEPGNNRP----VYIPQ-PRPPHPRLRREPEAEPGN 152
Query: 956 XR 961
R
Sbjct: 153 NR 154
Score = 22.6 bits (46), Expect = 7.5
Identities = 14/50 (28%), Positives = 19/50 (38%)
Frame = +2
Query: 779 PPXXAPDRXTXPXPPXPRPSRXPPXPXXSDXPPPXVIFXPSXSXPPXPXV 928
P P P PP PR R P ++ P ++ P PP P +
Sbjct: 124 PGNNRPVYIPQPRPPHPRLRREPEAEPGNNRP----VYIPQ-PRPPHPRI 168
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 24.2 bits (50), Expect = 2.5
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 672 TPXXAXPPPPPXSRXXP 722
TP PPPPP S P
Sbjct: 337 TPPKPAPPPPPPSSSGP 353
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 9.9
Identities = 11/27 (40%), Positives = 11/27 (40%), Gaps = 3/27 (11%)
Frame = +3
Query: 675 PXXAXPP---PPPXSRXXPPPPPXXXP 746
P PP PP R PPP P P
Sbjct: 124 PLTPFPPRFIPPDMYRLRPPPNPRFGP 150
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 9.9
Identities = 11/27 (40%), Positives = 11/27 (40%), Gaps = 3/27 (11%)
Frame = +3
Query: 675 PXXAXPP---PPPXSRXXPPPPPXXXP 746
P PP PP R PPP P P
Sbjct: 124 PLTPFPPRFIPPDMYRLRPPPNPRFGP 150
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 9.9
Identities = 11/27 (40%), Positives = 11/27 (40%), Gaps = 3/27 (11%)
Frame = +3
Query: 675 PXXAXPP---PPPXSRXXPPPPPXXXP 746
P PP PP R PPP P P
Sbjct: 124 PLTPFPPRFIPPDMYRLRPPPNPRFGP 150
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 9.9
Identities = 11/27 (40%), Positives = 11/27 (40%), Gaps = 3/27 (11%)
Frame = +3
Query: 675 PXXAXPP---PPPXSRXXPPPPPXXXP 746
P PP PP R PPP P P
Sbjct: 124 PLTPFPPRFIPPDMYRLRPPPNPRFGP 150
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 9.9
Identities = 11/27 (40%), Positives = 11/27 (40%), Gaps = 3/27 (11%)
Frame = +3
Query: 675 PXXAXPP---PPPXSRXXPPPPPXXXP 746
P PP PP R PPP P P
Sbjct: 124 PLTPFPPRFIPPDMYRLRPPPNPRFGP 150
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 9.9
Identities = 11/27 (40%), Positives = 11/27 (40%), Gaps = 3/27 (11%)
Frame = +3
Query: 675 PXXAXPP---PPPXSRXXPPPPPXXXP 746
P PP PP R PPP P P
Sbjct: 124 PLTPFPPRFIPPDMYRLRPPPNPRFGP 150
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 9.9
Identities = 11/27 (40%), Positives = 11/27 (40%), Gaps = 3/27 (11%)
Frame = +3
Query: 675 PXXAXPP---PPPXSRXXPPPPPXXXP 746
P PP PP R PPP P P
Sbjct: 124 PLTPFPPRFIPPDMYRLRPPPNPRFGP 150
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 9.9
Identities = 11/27 (40%), Positives = 11/27 (40%), Gaps = 3/27 (11%)
Frame = +3
Query: 675 PXXAXPP---PPPXSRXXPPPPPXXXP 746
P PP PP R PPP P P
Sbjct: 373 PLTPFPPRFIPPDMYRLRPPPNPRFGP 399
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 9.9
Identities = 11/27 (40%), Positives = 11/27 (40%), Gaps = 3/27 (11%)
Frame = +3
Query: 675 PXXAXPP---PPPXSRXXPPPPPXXXP 746
P PP PP R PPP P P
Sbjct: 373 PLTPFPPRFIPPDMYRLRPPPNPRFGP 399
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 9.9
Identities = 11/27 (40%), Positives = 11/27 (40%), Gaps = 3/27 (11%)
Frame = +3
Query: 675 PXXAXPP---PPPXSRXXPPPPPXXXP 746
P PP PP R PPP P P
Sbjct: 373 PLTPFPPRFIPPDMYRLRPPPNPRFGP 399
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 9.9
Identities = 11/27 (40%), Positives = 11/27 (40%), Gaps = 3/27 (11%)
Frame = +3
Query: 675 PXXAXPP---PPPXSRXXPPPPPXXXP 746
P PP PP R PPP P P
Sbjct: 373 PLTPFPPRFIPPDMYRLRPPPNPRFGP 399
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 9.9
Identities = 11/27 (40%), Positives = 11/27 (40%), Gaps = 3/27 (11%)
Frame = +3
Query: 675 PXXAXPP---PPPXSRXXPPPPPXXXP 746
P PP PP R PPP P P
Sbjct: 373 PLTPFPPRFIPPDMYRLRPPPNPRFGP 399
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 9.9
Identities = 11/27 (40%), Positives = 11/27 (40%), Gaps = 3/27 (11%)
Frame = +3
Query: 675 PXXAXPP---PPPXSRXXPPPPPXXXP 746
P PP PP R PPP P P
Sbjct: 373 PLTPFPPRFIPPDMYRLRPPPNPRFGP 399
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.2 bits (45), Expect = 9.9
Identities = 11/27 (40%), Positives = 11/27 (40%), Gaps = 3/27 (11%)
Frame = +3
Query: 675 PXXAXPP---PPPXSRXXPPPPPXXXP 746
P PP PP R PPP P P
Sbjct: 372 PLTPFPPRFIPPDMYRLRPPPNPRFGP 398
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.2 bits (45), Expect = 9.9
Identities = 11/27 (40%), Positives = 11/27 (40%), Gaps = 3/27 (11%)
Frame = +3
Query: 675 PXXAXPP---PPPXSRXXPPPPPXXXP 746
P PP PP R PPP P P
Sbjct: 357 PLTPFPPRFIPPDMYRLRPPPNPRFGP 383
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 9.9
Identities = 11/27 (40%), Positives = 11/27 (40%), Gaps = 3/27 (11%)
Frame = +3
Query: 675 PXXAXPP---PPPXSRXXPPPPPXXXP 746
P PP PP R PPP P P
Sbjct: 373 PLTPFPPRFIPPDMYRLRPPPNPRFGP 399
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,803
Number of Sequences: 438
Number of extensions: 7342
Number of successful extensions: 64
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 43702932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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