Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_H22
(902 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 40 0.002
07_03_1136 + 24218601-24218734,24218769-24219906 33 0.24
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 33 0.31
02_05_0686 - 30900748-30902167,30903442-30904742 33 0.31
07_03_1788 + 29523216-29524867,29525048-29525075 32 0.72
12_02_0131 - 14030721-14030774,14030848-14031027,14032050-140323... 30 2.2
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 30 2.9
09_03_0145 - 12749288-12751510 30 2.9
03_02_0164 - 6066744-6067637 30 2.9
07_03_0177 - 14770777-14772045 29 5.1
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 29 5.1
09_02_0603 - 11150739-11150746,11150791-11151340 28 8.8
06_03_1121 + 27767707-27768065,27768612-27769034,27770013-277701... 28 8.8
05_07_0236 - 28582157-28582552,28582639-28582911,28583324-285835... 28 8.8
02_05_0584 - 30135768-30135790,30136104-30136866 28 8.8
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/51 (43%), Positives = 22/51 (43%)
Frame = -1
Query: 902 GGXPXXPPXGGXGNPFXPXPEXXGXXGXXXGGNGXGGXKXKXPFPRGGGRV 750
GG P PP GG G P P P G G N GG P PRG G V
Sbjct: 1146 GGVPPPPPVGGLGGPPAP-PPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGV 1195
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/43 (41%), Positives = 19/43 (44%)
Frame = +1
Query: 757 PPPRGKGXXLFXPPFPXPPXXNPXXPXXSGXGXXGFPXPPXGG 885
PPPRG G + PP P P P G G P PP GG
Sbjct: 1187 PPPRGHG-GVGGPPTPPGAPAPPMPP-----GVPGGPPPPPGG 1223
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 33.5 bits (73), Expect = 0.24
Identities = 20/51 (39%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = -1
Query: 902 GGXPXXPPX-GGXGNPFXPXPEXXGXXGXXXGGNGXGGXKXKXPFPRGGGR 753
GG P PP GG G P P G G G GG P GGGR
Sbjct: 115 GGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGGGGALARPPGGGR 165
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = -1
Query: 902 GGXPXXPPXGGXGNPF-XPXPEXXGXXGXXXGGNGXGGXKXKXPFPRGGG 756
GG P P GG G P G G GG G GG + GGG
Sbjct: 179 GGGPGRAPGGGGGGGGPGRAPGGGGGGGGLGGGGGEGGAPERVIGGGGGG 228
Score = 28.7 bits (61), Expect = 6.7
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 3/52 (5%)
Frame = -1
Query: 902 GGXPXXPPXGGXGNPFXPXPEXXGXXGXXX---GGNGXGGXKXKXPFPRGGG 756
GG P GG G P G G GG G GG + P GGG
Sbjct: 141 GGAPRRVLGGGGGGGALARPPGGGRGGALGRPPGGGGGGGGPGRAPGGGGGG 192
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +1
Query: 754 RPPPRGKGXXLFXPPFPXPPXXNPXXPXXSGXGXXGFPXPPXGGXXG 894
RPP G+G L PP P G G G P GG G
Sbjct: 159 RPPGGGRGGALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGGGG 205
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 33.1 bits (72), Expect = 0.31
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -1
Query: 884 PPXGGXGNPFXPXPEXXGXXGXXXGGNGXGGXKXKXPFPRGGGR 753
PP GG G + P G GG G GG + GGGR
Sbjct: 48 PPGGGGGRGYEPGGGRGYGGGGGGGGRGYGGGGGGGGYESGGGR 91
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 33.1 bits (72), Expect = 0.31
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = +1
Query: 757 PPPRGKGXXLFXPPFPXPPXXNPXXPXXSGXGXXGFPXPPXGGXXGXP 900
PPP KG PP P P +P P G G P PP G P
Sbjct: 346 PPPPAKGP----PPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRP 389
Score = 31.5 bits (68), Expect = 0.95
Identities = 19/48 (39%), Positives = 19/48 (39%)
Frame = +1
Query: 757 PPPRGKGXXLFXPPFPXPPXXNPXXPXXSGXGXXGFPXPPXGGXXGXP 900
PPP KG PP P P P P G P PP GG G P
Sbjct: 337 PPPPPKG-----PPPPPPAKGPPPPPPPKGPSPP--PPPPPGGKKGGP 377
>07_03_1788 + 29523216-29524867,29525048-29525075
Length = 559
Score = 31.9 bits (69), Expect = 0.72
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1
Query: 757 PPPRGKGXXLFXPPFPXPPXXNPXXPXXSGXG 852
PP RG+G PP P PP +P SG G
Sbjct: 18 PPKRGRGRPRKNPPPPPPPATDPNPHPPSGAG 49
>12_02_0131 -
14030721-14030774,14030848-14031027,14032050-14032303,
14034414-14034488,14034682-14034910
Length = 263
Score = 30.3 bits (65), Expect = 2.2
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 158 GADMRAGFWRCGPLXA 205
GA +R GFW+CGP+ A
Sbjct: 64 GASVRLGFWQCGPVKA 79
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +1
Query: 757 PPPRGKGXXLFXPPFPXPPXXNPXXPXXSGXGXXGFPXPP 876
PPP F PP P PP P P + P PP
Sbjct: 551 PPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPP 590
>09_03_0145 - 12749288-12751510
Length = 740
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = +1
Query: 751 TRPPPRGKGXXLFXPPFPXPPXXNPXXPXXSGXGXXGFPXPPXGGXXGXP 900
++PP + K PP P PP P P G P P GG P
Sbjct: 17 SKPPFKPKPTNPSPPPPPPPPGIQPPPPALPGMPHGRPPPPFPGGRDAFP 66
>03_02_0164 - 6066744-6067637
Length = 297
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 155 NGADMRAGFWRCGPLXAPTLNYIRTTRRRRSVKNSFTEAAXGNDNR 292
NG+ + AG WR GP+ AP L RR V S + G++ R
Sbjct: 213 NGSPLPAGLWRPGPMAAPPL----LAGERRPVAVSTSSVFRGDEPR 254
>07_03_0177 - 14770777-14772045
Length = 422
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = -1
Query: 875 GGXGNPFXPXPEXXGXXGXXXGGNGXGGXKXKXPFPRGGG 756
GG G F G G GG G GG F +GGG
Sbjct: 73 GGGGGGFGGGGGFGGGGGGGLGGGGGGGLGGGGGFGKGGG 112
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -1
Query: 902 GGXPXXPPXGGXGNPFXPXPEXXGXXGXXXGGNGXGGXKXKXPFP 768
GG P GG G P P P G G GG G G P P
Sbjct: 380 GGYGGRPMPGG-GGPGAPPPYHGGGGGGGGGGGGGGYTGSAAPEP 423
>09_02_0603 - 11150739-11150746,11150791-11151340
Length = 185
Score = 28.3 bits (60), Expect = 8.8
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +1
Query: 751 TRPPPRGKGXXLFXPPFPXPPXXNPXXPXXSGXGXXGFPXPPXGGXXGXP 900
+RPP KG PPF PP P G P PP G P
Sbjct: 25 SRPPRLEKGNFALPPPFGFPPPPPPGSTFVP-LPQSGVPPPPPLGSFFVP 73
>06_03_1121 +
27767707-27768065,27768612-27769034,27770013-27770175,
27770271-27770381,27770895-27770963,27771117-27771203,
27771967-27772752
Length = 665
Score = 28.3 bits (60), Expect = 8.8
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = -1
Query: 884 PPXGGXGNPFXPXPEXXGXXGXXXGGNGXGGXKXKXPFPRGGGR 753
PP GG G P P G G GG G GG RG GR
Sbjct: 17 PPAGGGGGP-APHSSDPGGVG---GGGGGGGPGDGGGHGRGRGR 56
>05_07_0236 -
28582157-28582552,28582639-28582911,28583324-28583560,
28583653-28583694,28583782-28583964,28584393-28584524,
28585605-28586057
Length = 571
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +1
Query: 751 TRPPPR-GKGXXLFXPPFPXPPXXNPXXP 834
T PPP G G L PP P PP P P
Sbjct: 96 TMPPPSSGSGHTLPSPPPPLPPLLPPPQP 124
>02_05_0584 - 30135768-30135790,30136104-30136866
Length = 261
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Frame = +1
Query: 757 PPPRGKGXXLFXPPF--PXPPXXNPXXPXXSGXGXXGFPXP 873
PP G G F PF P P +P G GFP P
Sbjct: 85 PPSAGSGGFPFPLPFPLPLPAPGSPAAGAPPSSGSSGFPFP 125
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,259,443
Number of Sequences: 37544
Number of extensions: 341008
Number of successful extensions: 1158
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1098
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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