Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_H22
(902 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13071-2|AAL65793.1| 988|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.28
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.28
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 33 0.37
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 31 0.85
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr... 31 0.85
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 31 1.1
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.5
U41264-7|AAA82427.2| 819|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 2.0
Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 29 3.4
Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical pr... 29 4.5
U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical pr... 29 4.5
M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein ( C.ele... 29 4.5
AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical ... 29 4.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 6.0
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 6.0
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 29 6.0
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 29 6.0
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 29 6.0
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 29 6.0
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 29 6.0
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 29 6.0
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 6.0
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 28 7.9
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 28 7.9
AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical... 28 7.9
AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical... 28 7.9
>U13071-2|AAL65793.1| 988|Caenorhabditis elegans Hypothetical
protein T22F7.3 protein.
Length = 988
Score = 33.5 bits (73), Expect = 0.21
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2
Query: 278 GNDNRFNTLAECEQKC 325
GNDN FNTL C+QKC
Sbjct: 482 GNDNNFNTLMACQQKC 497
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.1 bits (72), Expect = 0.28
Identities = 18/48 (37%), Positives = 20/48 (41%)
Frame = +1
Query: 757 PPPRGKGXXLFXPPFPXPPXXNPXXPXXSGXGXXGFPXPPXGGXXGXP 900
PPP G ++ PP P PP P P G G P PP G P
Sbjct: 288 PPPPSSG--MWPPPPPPPPGRTPGPP-----GMPGMPPPPPPSRFGPP 328
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.1 bits (72), Expect = 0.28
Identities = 18/48 (37%), Positives = 20/48 (41%)
Frame = +1
Query: 757 PPPRGKGXXLFXPPFPXPPXXNPXXPXXSGXGXXGFPXPPXGGXXGXP 900
PPP G ++ PP P PP P P G G P PP G P
Sbjct: 298 PPPPSSG--MWPPPPPPPPGRTPGPP-----GMPGMPPPPPPSRFGPP 338
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 32.7 bits (71), Expect = 0.37
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 202 GAYFKLYSYNQETKKCEEFIYGGGQXERQSFQ 297
G Y + +N +T CEEFIY G Q +F+
Sbjct: 421 GTYSNRWWFNAKTGNCEEFIYSGCQGNANNFE 452
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 31.5 bits (68), Expect = 0.85
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +1
Query: 211 FKLYSYNQETKKCEEFIYGG 270
F+ Y YN++++KCE+F Y G
Sbjct: 436 FQRYFYNEDSQKCEQFTYSG 455
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 266 EAAXGNDNRFNTLAECEQKC 325
E GN N+F TL+ECE+ C
Sbjct: 1318 EGLGGNTNQFETLSECERIC 1337
>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
protein ZK287.4 protein.
Length = 1208
Score = 31.5 bits (68), Expect = 0.85
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 191 GPLXAPTLNYIRTTRRRRSVKNSFTEAAXGNDNRFNTLAECEQKCIK 331
GP P + R T++ + F GNDNRF +CE+ C++
Sbjct: 275 GPFNIPRYYFDRVTKK---CERFFYSGRDGNDNRFYKKNKCERLCLR 318
>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
protein Y55F3BR.2 protein.
Length = 1594
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 226 YNQETKKCEEFIYGGGQXERQSFQHIGRMRT 318
YN ETK CE F+Y G Q F + ++
Sbjct: 607 YNAETKTCESFLYTGCQGNNNRFNSLNECQS 637
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 278 GNDNRFNTLAECEQKC 325
GN+NRFN+L EC+ C
Sbjct: 624 GNNNRFNSLNECQSYC 639
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -1
Query: 875 GGXGNPFXPXPEXXGXXGXXXGGNGXGGXKXKXPFPRGGG 756
GG G P G G GG G GG P P GGG
Sbjct: 43 GGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -1
Query: 875 GGXGNPFXPXPEXXGXXGXXXGGNGXGGXKXKXPFPRGGG 756
GG G P G G GG G GG P P GGG
Sbjct: 43 GGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
>U41264-7|AAA82427.2| 819|Caenorhabditis elegans Hypothetical
protein F10E7.4 protein.
Length = 819
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 211 FKLYSYNQETKKCEEFIYGGGQXERQSFQ 297
F Y YN E +CE FI+ G + R F+
Sbjct: 635 FPRYWYNHEKTQCERFIFTGCKGNRNQFE 663
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 8/56 (14%)
Frame = +1
Query: 757 PPPRGKGXXLFXPPFPXPPXXN-------PXXPXXSGXG-XXGFPXPPXGGXXGXP 900
PPP+G F P P PP P P G G FP PP GG P
Sbjct: 727 PPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGPMSSFPPPPRGGMHHMP 782
>Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical
protein ZC84.1 protein.
Length = 1556
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 202 GAYFKLYSYNQETKKCEEFIYGGGQXERQSF 294
G+ FK Y YN +T+ CE F Y G +F
Sbjct: 643 GSTFKYY-YNPQTQNCESFQYNGCDGNSNNF 672
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 29.5 bits (63), Expect = 3.4
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +2
Query: 248 VKNSFTEAAXGNDNRFNTLAECEQKCIK*P 337
+ ++ + GN NRF A C +C+K P
Sbjct: 26 INHTVSRGCGGNSNRFMRRAHCRNRCVKQP 55
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 206 PTLNYIRTTRRRRSVKNSFTEAAXGNDNRFNTLAECEQKC 325
P Y R +R R S GN NRF T+++CE C
Sbjct: 1495 PAFYYDRASRTCRPFAYS---GCGGNSNRFMTVSQCENLC 1531
>Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 260 FTEAAXGNDNRFNTLAECEQKCIK*PIPSN*RTLFSQAD 376
F GN+NRF++L EC +C +P+N F D
Sbjct: 55 FYGGCEGNENRFDSLEECSSQC-HYQVPTNRDRCFQPHD 92
>Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical
protein T01B7.7 protein.
Length = 348
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/49 (38%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Frame = -1
Query: 893 PXXPPXGGXGNPFXPXPEXXGXXGXXXGGNGX---GGXKXKXPFPRGGG 756
P P GG G P P G GGN GG PFP GGG
Sbjct: 87 PTPNPYGGYGAS-QPAPPEKFPDGIPNGGNQPKFPGGGFPDGPFPNGGG 134
>U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical
protein F30H5.3 protein.
Length = 1599
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 278 GNDNRFNTLAECEQKC 325
GNDN F TL EC+ C
Sbjct: 598 GNDNNFETLLECQNTC 613
>M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein (
C.elegans collagen (rol-6) gene, complete cds. ).
Length = 348
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/49 (38%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Frame = -1
Query: 893 PXXPPXGGXGNPFXPXPEXXGXXGXXXGGNGX---GGXKXKXPFPRGGG 756
P P GG G P P G GGN GG PFP GGG
Sbjct: 87 PTPNPYGGYGAS-QPAPPEKFPDGIPNGGNQPKFPGGGFPDGPFPNGGG 134
>AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 260 FTEAAXGNDNRFNTLAECEQKCIK*PIPSN*RTLFSQAD 376
F GN+NRF++L EC +C +P+N F D
Sbjct: 55 FYGGCEGNENRFDSLEECSSQC-HYQVPTNRDRCFQPHD 92
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 7/55 (12%)
Frame = +1
Query: 757 PPPRGKGXXLFXPPFPXPP-------XXNPXXPXXSGXGXXGFPXPPXGGXXGXP 900
PPP G PP P PP P P G P PP GG G P
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 784
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 3/46 (6%)
Frame = +1
Query: 757 PPPRGKGXXLFXPPFPXPPXXN---PXXPXXSGXGXXGFPXPPXGG 885
PPP G PP P PP P P G G P PP G
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 7/55 (12%)
Frame = +1
Query: 757 PPPRGKGXXLFXPPFPXPP-------XXNPXXPXXSGXGXXGFPXPPXGGXXGXP 900
PPP G PP P PP P P G P PP GG G P
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 784
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 3/46 (6%)
Frame = +1
Query: 757 PPPRGKGXXLFXPPFPXPPXXN---PXXPXXSGXGXXGFPXPPXGG 885
PPP G PP P PP P P G G P PP G
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 206 PTLNYIRTTRRRRSVKNSFTEAAXGNDNRFNTLAECEQKC 325
P Y R +R R S GN NRF T+++CE C
Sbjct: 1145 PAFYYDRASRTCRPFAYS---GCGGNSNRFMTVSQCENLC 1181
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 206 PTLNYIRTTRRRRSVKNSFTEAAXGNDNRFNTLAECEQKC 325
P Y R +R R S GN NRF T+++CE C
Sbjct: 1359 PAFYYDRASRTCRPFAYS---GCGGNSNRFMTVSQCENLC 1395
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 206 PTLNYIRTTRRRRSVKNSFTEAAXGNDNRFNTLAECEQKC 325
P Y R +R R S GN NRF T+++CE C
Sbjct: 1544 PAFYYDRASRTCRPFAYS---GCGGNSNRFMTVSQCENLC 1580
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 206 PTLNYIRTTRRRRSVKNSFTEAAXGNDNRFNTLAECEQKC 325
P Y R +R R S GN NRF T+++CE C
Sbjct: 1536 PAFYYDRASRTCRPFAYS---GCGGNSNRFMTVSQCENLC 1572
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 206 PTLNYIRTTRRRRSVKNSFTEAAXGNDNRFNTLAECEQKC 325
P Y R +R R S GN NRF T+++CE C
Sbjct: 1547 PAFYYDRASRTCRPFAYS---GCGGNSNRFMTVSQCENLC 1583
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 206 PTLNYIRTTRRRRSVKNSFTEAAXGNDNRFNTLAECEQKC 325
P Y R +R R S GN NRF T+++CE C
Sbjct: 1548 PAFYYDRASRTCRPFAYS---GCGGNSNRFMTVSQCENLC 1584
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 7/55 (12%)
Frame = +1
Query: 757 PPPRGKGXXLFXPPFPXPP-------XXNPXXPXXSGXGXXGFPXPPXGGXXGXP 900
PPP G PP P PP P P G P PP GG G P
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 367
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 3/46 (6%)
Frame = +1
Query: 757 PPPRGKGXXLFXPPFPXPPXXN---PXXPXXSGXGXXGFPXPPXGG 885
PPP G PP P PP P P G G P PP G
Sbjct: 329 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 205 AYFKLYSYNQETKKCEEFIYGGGQXERQSF 294
A K + YN +K+C EF+Y G + +F
Sbjct: 363 ALLKRFYYNTFSKRCTEFMYKGTKGNENNF 392
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 242 RSVKNSFTEAAXGNDNRFNTLAECEQKC 325
R K+ A GN N F T +CE KC
Sbjct: 484 RQCKSFAYNGAKGNQNNFLTKQQCESKC 511
>Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical
protein F57B1.3 protein.
Length = 313
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Frame = +1
Query: 793 PPFPXPPXXNPXXPXXSGXGXXGFPXPP-XGGXXGXP 900
PP P P P P SG G G P P G G P
Sbjct: 244 PPGPPGPAGAPGQPGQSGSGQPGGPGPQGDAGAPGAP 280
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Frame = +1
Query: 760 PPRGKGXXLFXPPFPXPPXXNPXXPXXSG-XGXXGFPXPP-XGGXXGXP 900
PP+ L PP P P P P G G G P PP G G P
Sbjct: 133 PPQSPCEPLTPPPCPACPPGPPGAPGAPGKPGSEGPPGPPGHDGPNGGP 181
>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical protein
C37C3.6b protein.
Length = 2167
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 278 GNDNRFNTLAECEQKCIK 331
GN NRF T+ EC+ +C K
Sbjct: 1539 GNTNRFATIEECQARCPK 1556
>AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical
protein Y43F8B.3b protein.
Length = 1398
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 278 GNDNRFNTLAECEQKCIK*PIP 343
GN N F TL EC+ +C + P P
Sbjct: 304 GNRNNFQTLEECQAQCPESPNP 325
>AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical
protein Y43F8B.3a protein.
Length = 1816
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 278 GNDNRFNTLAECEQKCIK*PIP 343
GN N F TL EC+ +C + P P
Sbjct: 304 GNRNNFQTLEECQAQCPESPNP 325
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,567,821
Number of Sequences: 27780
Number of extensions: 269961
Number of successful extensions: 1233
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1175
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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