Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_H21
(872 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 159 2e-39
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 159 2e-39
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 159 2e-39
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 159 2e-39
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 159 2e-39
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 159 2e-39
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 159 2e-39
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 159 2e-39
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 159 2e-39
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 159 2e-39
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 158 6e-39
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 97 1e-20
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 97 1e-20
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 96 3e-20
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 96 3e-20
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 95 4e-20
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 73 3e-13
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 71 8e-13
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 42 8e-04
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 35 0.087
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 35 0.087
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.1
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 1.1
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 1.1
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 1.1
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 30 2.5
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 5.7
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 7.6
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 28 7.6
AC006610-7|AAK85451.1| 392|Caenorhabditis elegans Hypothetical ... 28 7.6
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 159 bits (387), Expect = 2e-39
Identities = 70/74 (94%), Positives = 72/74 (97%)
Frame = +1
Query: 244 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 423
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 424 VLLTEAPLNPKGQQ 465
VLLTEAPLNPK +
Sbjct: 104 VLLTEAPLNPKANR 117
Score = 142 bits (345), Expect = 2e-34
Identities = 104/242 (42%), Positives = 117/242 (48%), Gaps = 7/242 (2%)
Frame = +3
Query: 114 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERL 272
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 273 LRG*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQP 452
+ RG +YP + H + E + H
Sbjct: 61 SK--RGILTLKYP---IEHGIVTNWD---DMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
Query: 453 QGPTGEKMTQIMFEXFNSPXMYVAIQAVLSLYASGSYHRVSCSTPEMVSPTPYPSTKVTL 632
EKMTQIMFE FN+P MYVAIQAVLSLYASG V + + V+ T P +
Sbjct: 113 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT-VPIYEGYA 171
Query: 633 CPTPSSVWTWLVAXXXXXXXXXXXXXXXXXXXXLXXXIVRDIKXKLCYVALDFXQXMATX 812
P IVRDIK KLCYVALDF Q MAT
Sbjct: 172 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 231
Query: 813 AA 818
A+
Sbjct: 232 AS 233
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/55 (69%), Positives = 40/55 (72%)
Frame = +2
Query: 569 GIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXMKILTXRGYSFTTTA 733
G+VLDSGDGV+HTVPIYEGYALPHAI MKILT RGYSFTTTA
Sbjct: 151 GVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 205
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 159 bits (387), Expect = 2e-39
Identities = 70/74 (94%), Positives = 72/74 (97%)
Frame = +1
Query: 244 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 423
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 424 VLLTEAPLNPKGQQ 465
VLLTEAPLNPK +
Sbjct: 104 VLLTEAPLNPKANR 117
Score = 144 bits (348), Expect = 1e-34
Identities = 104/242 (42%), Positives = 117/242 (48%), Gaps = 7/242 (2%)
Frame = +3
Query: 114 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERL 272
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 273 LRG*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQP 452
+ RG +YP + H + E + H
Sbjct: 61 SK--RGILTLKYP---IEHGIVTNWD---DMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
Query: 453 QGPTGEKMTQIMFEXFNSPXMYVAIQAVLSLYASGSYHRVSCSTPEMVSPTPYPSTKVTL 632
EKMTQIMFE FN+P MYVAIQAVLSLYASG + + + V+ T P +
Sbjct: 113 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHT-VPIYEGYA 171
Query: 633 CPTPSSVWTWLVAXXXXXXXXXXXXXXXXXXXXLXXXIVRDIKXKLCYVALDFXQXMATX 812
P IVRDIK KLCYVALDF Q MAT
Sbjct: 172 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 231
Query: 813 AA 818
A+
Sbjct: 232 AS 233
Score = 80.6 bits (190), Expect = 1e-15
Identities = 39/55 (70%), Positives = 40/55 (72%)
Frame = +2
Query: 569 GIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXMKILTXRGYSFTTTA 733
GIVLDSGDGV+HTVPIYEGYALPHAI MKILT RGYSFTTTA
Sbjct: 151 GIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 205
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 159 bits (387), Expect = 2e-39
Identities = 70/74 (94%), Positives = 72/74 (97%)
Frame = +1
Query: 244 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 423
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 424 VLLTEAPLNPKGQQ 465
VLLTEAPLNPK +
Sbjct: 104 VLLTEAPLNPKANR 117
Score = 142 bits (345), Expect = 2e-34
Identities = 104/242 (42%), Positives = 117/242 (48%), Gaps = 7/242 (2%)
Frame = +3
Query: 114 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERL 272
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 273 LRG*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQP 452
+ RG +YP + H + E + H
Sbjct: 61 SK--RGILTLKYP---IEHGIVTNWD---DMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
Query: 453 QGPTGEKMTQIMFEXFNSPXMYVAIQAVLSLYASGSYHRVSCSTPEMVSPTPYPSTKVTL 632
EKMTQIMFE FN+P MYVAIQAVLSLYASG V + + V+ T P +
Sbjct: 113 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT-VPIYEGYA 171
Query: 633 CPTPSSVWTWLVAXXXXXXXXXXXXXXXXXXXXLXXXIVRDIKXKLCYVALDFXQXMATX 812
P IVRDIK KLCYVALDF Q MAT
Sbjct: 172 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 231
Query: 813 AA 818
A+
Sbjct: 232 AS 233
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/55 (69%), Positives = 40/55 (72%)
Frame = +2
Query: 569 GIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXMKILTXRGYSFTTTA 733
G+VLDSGDGV+HTVPIYEGYALPHAI MKILT RGYSFTTTA
Sbjct: 151 GVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 205
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 159 bits (387), Expect = 2e-39
Identities = 70/74 (94%), Positives = 72/74 (97%)
Frame = +1
Query: 244 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 423
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 424 VLLTEAPLNPKGQQ 465
VLLTEAPLNPK +
Sbjct: 104 VLLTEAPLNPKANR 117
Score = 142 bits (345), Expect = 2e-34
Identities = 104/242 (42%), Positives = 117/242 (48%), Gaps = 7/242 (2%)
Frame = +3
Query: 114 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERL 272
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 273 LRG*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQP 452
+ RG +YP + H + E + H
Sbjct: 61 SK--RGILTLKYP---IEHGIVTNWD---DMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
Query: 453 QGPTGEKMTQIMFEXFNSPXMYVAIQAVLSLYASGSYHRVSCSTPEMVSPTPYPSTKVTL 632
EKMTQIMFE FN+P MYVAIQAVLSLYASG V + + V+ T P +
Sbjct: 113 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT-VPIYEGYA 171
Query: 633 CPTPSSVWTWLVAXXXXXXXXXXXXXXXXXXXXLXXXIVRDIKXKLCYVALDFXQXMATX 812
P IVRDIK KLCYVALDF Q MAT
Sbjct: 172 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 231
Query: 813 AA 818
A+
Sbjct: 232 AS 233
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/55 (69%), Positives = 40/55 (72%)
Frame = +2
Query: 569 GIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXMKILTXRGYSFTTTA 733
G+VLDSGDGV+HTVPIYEGYALPHAI MKILT RGYSFTTTA
Sbjct: 151 GVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 205
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 159 bits (387), Expect = 2e-39
Identities = 70/74 (94%), Positives = 72/74 (97%)
Frame = +1
Query: 244 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 423
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 424 VLLTEAPLNPKGQQ 465
VLLTEAPLNPK +
Sbjct: 104 VLLTEAPLNPKANR 117
Score = 142 bits (345), Expect = 2e-34
Identities = 104/242 (42%), Positives = 117/242 (48%), Gaps = 7/242 (2%)
Frame = +3
Query: 114 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERL 272
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 273 LRG*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQP 452
+ RG +YP + H + E + H
Sbjct: 61 SK--RGILTLKYP---IEHGIVTNWD---DMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
Query: 453 QGPTGEKMTQIMFEXFNSPXMYVAIQAVLSLYASGSYHRVSCSTPEMVSPTPYPSTKVTL 632
EKMTQIMFE FN+P MYVAIQAVLSLYASG V + + V+ T P +
Sbjct: 113 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT-VPIYEGYA 171
Query: 633 CPTPSSVWTWLVAXXXXXXXXXXXXXXXXXXXXLXXXIVRDIKXKLCYVALDFXQXMATX 812
P IVRDIK KLCYVALDF Q MAT
Sbjct: 172 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 231
Query: 813 AA 818
A+
Sbjct: 232 AS 233
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/55 (69%), Positives = 40/55 (72%)
Frame = +2
Query: 569 GIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXMKILTXRGYSFTTTA 733
G+VLDSGDGV+HTVPIYEGYALPHAI MKILT RGYSFTTTA
Sbjct: 151 GVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 205
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 159 bits (387), Expect = 2e-39
Identities = 70/74 (94%), Positives = 72/74 (97%)
Frame = +1
Query: 244 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 423
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 424 VLLTEAPLNPKGQQ 465
VLLTEAPLNPK +
Sbjct: 104 VLLTEAPLNPKANR 117
Score = 142 bits (344), Expect = 3e-34
Identities = 102/242 (42%), Positives = 117/242 (48%), Gaps = 7/242 (2%)
Frame = +3
Query: 114 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERL 272
MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 273 LRG*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQP 452
+ RG +YP + H + E + H
Sbjct: 61 SK--RGILTLKYP---IEHGIVTNWD---DMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
Query: 453 QGPTGEKMTQIMFEXFNSPXMYVAIQAVLSLYASGSYHRVSCSTPEMVSPTPYPSTKVTL 632
EKMTQIMFE FN+P MYVAIQAVLSLYASG + + + V+ T P +
Sbjct: 113 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHT-VPIYEGYA 171
Query: 633 CPTPSSVWTWLVAXXXXXXXXXXXXXXXXXXXXLXXXIVRDIKXKLCYVALDFXQXMATX 812
P IVRDIK KLCYVALDF Q MAT
Sbjct: 172 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 231
Query: 813 AA 818
A+
Sbjct: 232 AS 233
Score = 80.6 bits (190), Expect = 1e-15
Identities = 39/55 (70%), Positives = 40/55 (72%)
Frame = +2
Query: 569 GIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXMKILTXRGYSFTTTA 733
GIVLDSGDGV+HTVPIYEGYALPHAI MKILT RGYSFTTTA
Sbjct: 151 GIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 205
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 159 bits (387), Expect = 2e-39
Identities = 70/74 (94%), Positives = 72/74 (97%)
Frame = +1
Query: 244 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 423
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 424 VLLTEAPLNPKGQQ 465
VLLTEAPLNPK +
Sbjct: 104 VLLTEAPLNPKANR 117
Score = 142 bits (345), Expect = 2e-34
Identities = 104/242 (42%), Positives = 117/242 (48%), Gaps = 7/242 (2%)
Frame = +3
Query: 114 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERL 272
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 273 LRG*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQP 452
+ RG +YP + H + E + H
Sbjct: 61 SK--RGILTLKYP---IEHGIVTNWD---DMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
Query: 453 QGPTGEKMTQIMFEXFNSPXMYVAIQAVLSLYASGSYHRVSCSTPEMVSPTPYPSTKVTL 632
EKMTQIMFE FN+P MYVAIQAVLSLYASG V + + V+ T P +
Sbjct: 113 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT-VPIYEGYA 171
Query: 633 CPTPSSVWTWLVAXXXXXXXXXXXXXXXXXXXXLXXXIVRDIKXKLCYVALDFXQXMATX 812
P IVRDIK KLCYVALDF Q MAT
Sbjct: 172 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 231
Query: 813 AA 818
A+
Sbjct: 232 AS 233
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/55 (69%), Positives = 40/55 (72%)
Frame = +2
Query: 569 GIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXMKILTXRGYSFTTTA 733
G+VLDSGDGV+HTVPIYEGYALPHAI MKILT RGYSFTTTA
Sbjct: 151 GVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 205
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 159 bits (387), Expect = 2e-39
Identities = 70/74 (94%), Positives = 72/74 (97%)
Frame = +1
Query: 244 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 423
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 30 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 89
Query: 424 VLLTEAPLNPKGQQ 465
VLLTEAPLNPK +
Sbjct: 90 VLLTEAPLNPKANR 103
Score = 103 bits (248), Expect = 1e-22
Identities = 86/224 (38%), Positives = 99/224 (44%), Gaps = 7/224 (3%)
Frame = +3
Query: 168 KAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERLLRG*RGPEQERYPHSEVP 326
+AGFAGDDAPRAVFPSIVGRPRHQG +D G E + RG +YP +
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK--RGILTLKYP---IE 59
Query: 327 HRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQPQGPTGEKMTQIMFEXFNS 506
H + E + H EKMTQIMFE FN+
Sbjct: 60 HGIVTNWD---DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 116
Query: 507 PXMYVAIQAVLSLYASGSYHRVSCSTPEMVSPTPYPSTKVTLCPTPSSVWTWLVAXXXXX 686
P MYVAIQAVLSLYASG V + + V+ T P + P
Sbjct: 117 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT-VPIYEGYALPHAILRLDLAGRDLTDY 175
Query: 687 XXXXXXXXXXXXXXXLXXXIVRDIKXKLCYVALDFXQXMATXAA 818
IVRDIK KLCYVALDF Q MAT A+
Sbjct: 176 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS 219
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/55 (69%), Positives = 40/55 (72%)
Frame = +2
Query: 569 GIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXMKILTXRGYSFTTTA 733
G+VLDSGDGV+HTVPIYEGYALPHAI MKILT RGYSFTTTA
Sbjct: 137 GVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 191
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 159 bits (387), Expect = 2e-39
Identities = 70/74 (94%), Positives = 72/74 (97%)
Frame = +1
Query: 244 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 423
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 424 VLLTEAPLNPKGQQ 465
VLLTEAPLNPK +
Sbjct: 104 VLLTEAPLNPKANR 117
Score = 142 bits (345), Expect = 2e-34
Identities = 104/242 (42%), Positives = 117/242 (48%), Gaps = 7/242 (2%)
Frame = +3
Query: 114 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERL 272
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 273 LRG*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQP 452
+ RG +YP + H + E + H
Sbjct: 61 SK--RGILTLKYP---IEHGIVTNWD---DMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
Query: 453 QGPTGEKMTQIMFEXFNSPXMYVAIQAVLSLYASGSYHRVSCSTPEMVSPTPYPSTKVTL 632
EKMTQIMFE FN+P MYVAIQAVLSLYASG V + + V+ T P +
Sbjct: 113 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT-VPIYEGYA 171
Query: 633 CPTPSSVWTWLVAXXXXXXXXXXXXXXXXXXXXLXXXIVRDIKXKLCYVALDFXQXMATX 812
P IVRDIK KLCYVALDF Q MAT
Sbjct: 172 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 231
Query: 813 AA 818
A+
Sbjct: 232 AS 233
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/55 (69%), Positives = 40/55 (72%)
Frame = +2
Query: 569 GIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXMKILTXRGYSFTTTA 733
G+VLDSGDGV+HTVPIYEGYALPHAI MKILT RGYSFTTTA
Sbjct: 151 GVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 205
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 159 bits (386), Expect = 2e-39
Identities = 69/74 (93%), Positives = 72/74 (97%)
Frame = +1
Query: 244 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 423
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELR+APEEHP
Sbjct: 43 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHP 102
Query: 424 VLLTEAPLNPKGQQ 465
VLLTEAPLNPK +
Sbjct: 103 VLLTEAPLNPKSNR 116
Score = 125 bits (301), Expect = 5e-29
Identities = 94/240 (39%), Positives = 111/240 (46%), Gaps = 7/240 (2%)
Frame = +3
Query: 120 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERLLR 278
++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E +
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 279 G*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQPQG 458
RG +YP + H + E + H
Sbjct: 62 --RGILTLKYP---IEHGIVTNWD---DMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPK 113
Query: 459 PTGEKMTQIMFEXFNSPXMYVAIQAVLSLYASGSYHRVSCSTPEMVSPTPYPSTKVTLCP 638
EKMTQIMFE FN+P MYV IQAVLSLYASG + T + V+ T P + P
Sbjct: 114 SNREKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHT-VPIYEGYALP 172
Query: 639 TPSSVWTWLVAXXXXXXXXXXXXXXXXXXXXLXXXIVRDIKXKLCYVALDFXQXMATXAA 818
IVRDIK KLCYVA DF +A A+
Sbjct: 173 HAIQRLDLAGRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVAHDFESELAAAAS 232
Score = 78.2 bits (184), Expect = 7e-15
Identities = 37/55 (67%), Positives = 40/55 (72%)
Frame = +2
Query: 569 GIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXMKILTXRGYSFTTTA 733
GIVLD+GDGV+HTVPIYEGYALPHAI MKILT RGY+FTTTA
Sbjct: 150 GIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTFTTTA 204
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 158 bits (383), Expect = 6e-39
Identities = 69/73 (94%), Positives = 71/73 (97%)
Frame = +1
Query: 247 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 426
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 427 LLTEAPLNPKGQQ 465
LLTEAPLNPK +
Sbjct: 61 LLTEAPLNPKANR 73
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/55 (69%), Positives = 40/55 (72%)
Frame = +2
Query: 569 GIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXMKILTXRGYSFTTTA 733
G+VLDSGDGV+HTVPIYEGYALPHAI MKILT RGYSFTTTA
Sbjct: 107 GVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 161
Score = 75.8 bits (178), Expect = 4e-14
Identities = 52/117 (44%), Positives = 58/117 (49%)
Frame = +3
Query: 468 EKMTQIMFEXFNSPXMYVAIQAVLSLYASGSYHRVSCSTPEMVSPTPYPSTKVTLCPTPS 647
EKMTQIMFE FN+P MYVAIQAVLSLYASG V + + V+ T P + P
Sbjct: 74 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT-VPIYEGYALPHAI 132
Query: 648 SVWTWLVAXXXXXXXXXXXXXXXXXXXXLXXXIVRDIKXKLCYVALDFXQXMATXAA 818
IVRDIK KLCYVALDF Q MAT A+
Sbjct: 133 LRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS 189
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 97.5 bits (232), Expect = 1e-20
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +3
Query: 114 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 242
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 95.1 bits (226), Expect = 6e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 244 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 372
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 97.5 bits (232), Expect = 1e-20
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +3
Query: 114 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 242
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 89.4 bits (212), Expect = 3e-18
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 244 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDM 363
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDM
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 114 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 242
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 95.1 bits (226), Expect = 6e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 244 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 372
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 114 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 242
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 95.1 bits (226), Expect = 6e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 244 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 372
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 95.5 bits (227), Expect = 4e-20
Identities = 39/71 (54%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Frame = +1
Query: 244 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEH 420
VM G D ++G +A+S RG+ +++YP+EHGI+ NW DMEKIW + F ++L++ PEEH
Sbjct: 46 VMAGGLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEH 105
Query: 421 PVLLTEAPLNP 453
PVLLT+APLNP
Sbjct: 106 PVLLTDAPLNP 116
Score = 48.0 bits (109), Expect = 9e-06
Identities = 22/51 (43%), Positives = 28/51 (54%)
Frame = +2
Query: 569 GIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXMKILTXRGYSF 721
G+VLDSGDGV+H VPI +G+A+ HAI +L GY F
Sbjct: 154 GVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEF 204
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/42 (52%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
Frame = +3
Query: 120 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 236
D DV A +V+DNGSG+ KAGFAG+ P+ F + VGRP++
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKY 43
Score = 41.5 bits (93), Expect = 8e-04
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +3
Query: 468 EKMTQIMFEXFNSPXMYVAIQAVLSLYASG 557
E+ +I FE FN P +Y+ +QAVLSLYA+G
Sbjct: 121 ERSAEIFFETFNVPALYIQMQAVLSLYATG 150
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 72.9 bits (171), Expect = 3e-13
Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Frame = +1
Query: 181 PATTRPAPSSRPSWVALATRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDD 360
PA P+ RP + +T+ V + KD VG+E R +L + YP+++GI+ NWDD
Sbjct: 28 PAHIFPSMVGRP--IVRSTQRVG-NIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDD 84
Query: 361 MEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKGQQ 465
M +W HTF E L + P+E +LLTE PLNP +
Sbjct: 85 MAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNR 120
Score = 58.4 bits (135), Expect = 6e-09
Identities = 46/147 (31%), Positives = 68/147 (46%), Gaps = 7/147 (4%)
Frame = +3
Query: 138 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGRDGRYGPERLLRG*RGPEQERYP 311
+VVDNG+G K G+AG + P +FPS+VGRP R R G + L+ G + +
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 312 HSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQPQGPTG-----EKM 476
P + + + +D+A H+ + P EKM
Sbjct: 69 DINYP----MDNGIVRNWDDMA-HVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKM 123
Query: 477 TQIMFEXFNSPXMYVAIQAVLSLYASG 557
Q+MFE + +YVA+QAVL+LYA G
Sbjct: 124 FQVMFEQYGFNSIYVAVQAVLTLYAQG 150
Score = 52.4 bits (120), Expect = 4e-07
Identities = 23/55 (41%), Positives = 32/55 (58%)
Frame = +2
Query: 569 GIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXMKILTXRGYSFTTTA 733
G+V+DSGDGV+H P+YEG+AL H +K+L RGY+F +A
Sbjct: 154 GVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNFNHSA 208
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 71.3 bits (167), Expect = 8e-13
Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = +1
Query: 244 VMVGMGQKDSYVGDEAQSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEH 420
V G+ D ++GDEA S T+KYPI HGI+ +WD ME+ W + LR PE+H
Sbjct: 56 VGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
Query: 421 PVLLTEAPLN 450
LLTE PLN
Sbjct: 116 FFLLTEPPLN 125
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +3
Query: 468 EKMTQIMFEXFNSPXMYVAIQAVLSLYAS 554
E +IMFE FN P +Y+A+QAVL+L AS
Sbjct: 131 EYTAEIMFESFNVPGLYIAVQAVLALTAS 159
Score = 37.5 bits (83), Expect = 0.012
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +2
Query: 569 GIVLDSGDGVSHTVPIYEGYALPHAI 646
G+V+DSGDGV+H +P+ +GY + I
Sbjct: 172 GLVIDSGDGVTHCIPVADGYVIGSCI 197
Score = 35.5 bits (78), Expect = 0.050
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 114 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 221
M + A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 41.5 bits (93), Expect = 8e-04
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +1
Query: 328 IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKGQQ 465
++ G+I +W+ EKI H++ N L P EHPVL +E+ N + ++
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARR 139
Score = 37.1 bits (82), Expect = 0.016
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3
Query: 468 EKMTQIMFEXFNSPXMYVAIQAVLSLYASGSYH 566
EK+T+IMFE F P Y++ VLS +A G H
Sbjct: 140 EKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTH 172
Score = 33.9 bits (74), Expect = 0.15
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 123 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 221
D+V+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
Score = 32.7 bits (71), Expect = 0.35
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +2
Query: 569 GIVLDSGDGVSHTVPIYEGYALPHAI 646
G+++DSG + VP+++GYA+ HA+
Sbjct: 173 GLMVDSGATQTSVVPVFDGYAVTHAV 198
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 34.7 bits (76), Expect = 0.087
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 262 QKDSYVGDEAQSKRGILTLKY--PIEHGIITNWDDMEKIWHHTF 387
+K +V E + +L Y PIE G + NWD ++IW TF
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 34.7 bits (76), Expect = 0.087
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 262 QKDSYVGDEAQSKRGILTLKY--PIEHGIITNWDDMEKIWHHTF 387
+K +V E + +L Y PIE G + NWD ++IW TF
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.81
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 145 STMAPACARPVSPATTRPAPSSRP 216
+T AP PATTRPAP+S+P
Sbjct: 317 ATRAPPATTRAPPATTRPAPASQP 340
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 292 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 158
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 292 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 158
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 292 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 158
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 292 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 158
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -2
Query: 292 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPA 179
GPR P P +P P G P G+ +RG P+
Sbjct: 170 GPRGPAGDAGSPGQPGHPGSPGNPGRGGQRSRGLPGPS 207
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = -2
Query: 310 GYLSCSGPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 158
G C P P P +P P G P G + +GA++P +P+ P
Sbjct: 112 GCTGCCNPGPPGPG-GRPGKPGTPGKPGAPGNPGASGKGAAAPCEPSTPPP 161
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = +3
Query: 228 PRHQGRDGRYGPERL--LRG*RGPEQERYPHSEVPHRARYHH 347
PR G GR+GP G GP + P R +HH
Sbjct: 376 PRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGRSPSRHGHHH 417
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +1
Query: 136 RL*STMAPACARPVSPATTRPAPSSRPSWVALATR 240
RL S +AP A P S A TR APS + VA R
Sbjct: 231 RLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRR 265
>AC006610-7|AAK85451.1| 392|Caenorhabditis elegans Hypothetical
protein C30F12.5 protein.
Length = 392
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 561 YHRVSCSTPEMVSPTPYPSTKVTLCP-TPSSVWTWLV 668
+H STP SP PYP T P TP+S + + V
Sbjct: 262 HHDAIYSTPYSGSPLPYPPPPGTTVPHTPNSTYRYRV 298
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,326,321
Number of Sequences: 27780
Number of extensions: 360338
Number of successful extensions: 1579
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1567
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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