Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_H18
         (885 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095529-1|AAM12260.1|  935|Drosophila melanogaster RE23942p pro...    27   5.6  
AE014298-2820|AAF48937.2|  935|Drosophila melanogaster CG7884-PA...    27   5.6  
AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-P...    29   6.5  

>AY095529-1|AAM12260.1|  935|Drosophila melanogaster RE23942p
           protein.
          Length = 935

 Score = 27.5 bits (58), Expect(2) = 5.6
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +3

Query: 654 YGGQQR*QHQGAMVLSSPPSTKTT 725
           Y  QQR +   AM   SPPST TT
Sbjct: 769 YDAQQRPRSTSAMTTISPPSTTTT 792



 Score = 20.6 bits (41), Expect(2) = 5.6
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 699 SSPPSTKTTVLFFIYNR 749
           ++PP+T TTV+  +Y R
Sbjct: 794 NTPPTTTTTVVTPLYVR 810


>AE014298-2820|AAF48937.2|  935|Drosophila melanogaster CG7884-PA
           protein.
          Length = 935

 Score = 27.5 bits (58), Expect(2) = 5.6
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +3

Query: 654 YGGQQR*QHQGAMVLSSPPSTKTT 725
           Y  QQR +   AM   SPPST TT
Sbjct: 769 YDAQQRPRSTSAMTTISPPSTTTT 792



 Score = 20.6 bits (41), Expect(2) = 5.6
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 699 SSPPSTKTTVLFFIYNR 749
           ++PP+T TTV+  +Y R
Sbjct: 794 NTPPTTTTTVVTPLYVR 810


>AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-PA
           protein.
          Length = 3539

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +1

Query: 115 ACSPPARASLNYPRTLLTKTSRRNCTTASSPATTTVLS 228
           +CSP + ++     T  T+TS  N T  SS ATTTV S
Sbjct: 747 SCSPSSSSASTLLSTA-TRTSMSNSTCTSSAATTTVSS 783


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,585,294
Number of Sequences: 53049
Number of extensions: 862833
Number of successful extensions: 2409
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2406
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)