Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_H16
(921 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 44 2e-05
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 42 1e-04
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 41 3e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 40 4e-04
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 36 0.011
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 36 0.011
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 36 0.011
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 32 0.100
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 29 0.93
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 29 0.93
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 28 1.6
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 28 2.1
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 2.8
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 6.5
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 26 8.6
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 26 8.6
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 26 8.6
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 44.4 bits (100), Expect = 2e-05
Identities = 36/134 (26%), Positives = 45/134 (33%), Gaps = 6/134 (4%)
Frame = +3
Query: 537 RSPPPXTXXPXAXRLGXPXXAPPRAGIRXPXXSGXXPGXXPXXPXXXPXGPAPRTKGP-- 710
++PP A + P APP + P + P P P PAP ++ P
Sbjct: 1020 KAPPVPLPSADAPPIPVPSTAPP---VPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSI 1076
Query: 711 XCXGXFPXXPXP---PPTTHXXXXXPPVPXXXPPPAPXXXPGXXPP-GKPPXXPPPXSRP 878
P P P PP PPVP P P PP KP PP P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Query: 879 XPLXRXPGPALFPP 920
P P++ P
Sbjct: 1137 SGAPPVPKPSVAAP 1150
Score = 44.0 bits (99), Expect = 3e-05
Identities = 38/136 (27%), Positives = 42/136 (30%), Gaps = 6/136 (4%)
Frame = +3
Query: 531 PFRSPPPXTXXPXAXRLGXPXXAPPRAGIRXPXXSGXXPGXXPXX---PXXXPXGPAPRT 701
P +P P P P A P SG P P P P G P
Sbjct: 1084 PVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
Query: 702 KGPXCXGXFPXXPXPPPTTHXXXXXPPVPXXX--PPPAPXXXPGXXPPGKPPXXPPPXSR 875
K P PP PPVP PP P G PP PP PP +
Sbjct: 1144 KPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAG-VPPVPPPSEAPPVPK 1202
Query: 876 P-XPLXRXPGPALFPP 920
P + P P+ PP
Sbjct: 1203 PSVGVPPVPPPSTAPP 1218
Score = 41.1 bits (92), Expect = 2e-04
Identities = 41/142 (28%), Positives = 45/142 (31%), Gaps = 1/142 (0%)
Frame = +2
Query: 389 PXXPAKTXXPP-PXASIXGXXVXGXVWXXFPGLXXPAXPRXXGVXXWGPLPXPPSXXXXA 565
P P T PP P +S V P P+ P G P+P P S
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPV--PAPSSEIPSIPAPSGAP---PVPAP-SGIPPV 1094
Query: 566 PGXSVGXTVXRPPQGGNTVXXKXGGXPRXXPXXPXXXPXGPXXPYQGPALPGXLPXXAPP 745
P SV PP +V P P P P P A P P A P
Sbjct: 1095 PKPSVAA----PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAP 1150
Query: 746 PPNXPSXKXXAPGPXXAPPPXP 811
P PS P P A PP P
Sbjct: 1151 PVPAPSGAPPVPKPSVAAPPVP 1172
Score = 40.3 bits (90), Expect = 4e-04
Identities = 34/122 (27%), Positives = 37/122 (30%), Gaps = 3/122 (2%)
Frame = +3
Query: 528 APFRSPPPXTXXPXAXRLGXPXXAPPR-AGIRXPXXSGXXPGXXPXXPXXXPXGPAPRTK 704
AP P P G P P A P SG P P P PAP
Sbjct: 1101 APPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPP--VPKPSVAAPPVPAPSGA 1158
Query: 705 GPXCXGXFPXXPXPPPTTHXXXXXPPVPXXXPPPAPXXXPGXXPP--GKPPXXPPPXSRP 878
P P P P++ P P P P P P G PP PP + P
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Query: 879 XP 884
P
Sbjct: 1219 VP 1220
Score = 37.9 bits (84), Expect = 0.002
Identities = 37/142 (26%), Positives = 42/142 (29%), Gaps = 10/142 (7%)
Frame = +3
Query: 525 GAPFRSPPPXTXXPXAXRLGXPXXAPP---RAGIRXPXXSGXXPGXXPXXPXXXPXGPAP 695
GAP PP + P APP +GI P P PAP
Sbjct: 1058 GAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAP 1117
Query: 696 RTKGPXCXGXFPXXPXP-----PPTTHXXXXXPPVP-XXXPPPAPXXXPGXXPPGKPPXX 857
P P P PP PPVP PP P P P
Sbjct: 1118 SGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSG 1177
Query: 858 PPPXSRPXP-LXRXPGPALFPP 920
PP +P + P P+ PP
Sbjct: 1178 IPPVPKPAAGVPPVPPPSEAPP 1199
Score = 36.7 bits (81), Expect = 0.005
Identities = 31/127 (24%), Positives = 34/127 (26%)
Frame = +3
Query: 540 SPPPXTXXPXAXRLGXPXXAPPRAGIRXPXXSGXXPGXXPXXPXXXPXGPAPRTKGPXCX 719
S PP P A L P P A + P P P AP P
Sbjct: 984 SEPPKDHPPSAP-LSKPVSTSPAAPLARVPPVPKLSSKAPPVPL--PSADAPPIPVPSTA 1040
Query: 720 GXFPXXPXPPPTTHXXXXXPPVPXXXPPPAPXXXPGXXPPGKPPXXPPPXSRPXPLXRXP 899
P PP P P P P+ P G PP P P P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVA 1100
Query: 900 GPALFPP 920
P + P
Sbjct: 1101 APPVPKP 1107
Score = 36.7 bits (81), Expect = 0.005
Identities = 36/136 (26%), Positives = 42/136 (30%), Gaps = 4/136 (2%)
Frame = +3
Query: 525 GAPFRSPPPXTXXPXAXRLGXPXXAPPR-AGIRXPXXSGXXPGXXPXXPXXXPXGPAPRT 701
GAP P P G P P A P SG P P P PAP +
Sbjct: 1119 GAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPP--VPKPSVAAPPVPAPSS 1176
Query: 702 KGPXCXGXFPXXPX-PPPTTHXXXXXPPVPXXXPPPAPXXXPGXXPPGKPPXXPPPXSR- 875
P P PPP+ P V PP P P P P P ++
Sbjct: 1177 GIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKA 1236
Query: 876 -PXPLXRXPGPALFPP 920
P P P++ P
Sbjct: 1237 PPVPAPSSEAPSVSTP 1252
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +3
Query: 777 PPVPXXXPPPAPXXXPGXXPPGKPPXXPPP 866
P P PPP P P +PP PP
Sbjct: 963 PAAPPSIPPPLPVSNILSSPTSEPPKDHPP 992
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 41.9 bits (94), Expect = 1e-04
Identities = 22/64 (34%), Positives = 23/64 (35%), Gaps = 3/64 (4%)
Frame = +3
Query: 738 PXPPPTTHXXXXXPPVPXXXPPPAP---XXXPGXXPPGKPPXXPPPXSRPXPLXRXPGPA 908
P PPP P P PPPAP P PPG PPP P P G
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSR 791
Query: 909 LFPP 920
+ P
Sbjct: 792 YYAP 795
Score = 38.3 bits (85), Expect = 0.002
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +3
Query: 729 PXXPXPPPTTHXXXXXPPVPXXXPPPAPXXXPGXXPPGKPPXXPPP 866
P P P PP P PP P PG G PP PPP
Sbjct: 737 PAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 31.5 bits (68), Expect = 0.17
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 3/52 (5%)
Frame = +2
Query: 665 PXXXPXGPXXPYQGPA---LPGXLPXXAPPPPNXPSXKXXAPGPXXAPPPXP 811
P P P PA +P P PPP P GP PPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.7 bits (66), Expect = 0.30
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 5/54 (9%)
Frame = +3
Query: 738 PXPPPTTHXXXXXPPVPXXX-----PPPAPXXXPGXXPPGKPPXXPPPXSRPXP 884
P PPP PP P PPP P P G P P + P P
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 26.6 bits (56), Expect = 4.9
Identities = 17/59 (28%), Positives = 18/59 (30%), Gaps = 5/59 (8%)
Frame = +2
Query: 665 PXXXPXGPXXPYQG-----PALPGXLPXXAPPPPNXPSXKXXAPGPXXAPPPXPXXXPR 826
P P P P G P PG PPPP P AP P P+
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEPK 804
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 40.7 bits (91), Expect = 3e-04
Identities = 34/113 (30%), Positives = 39/113 (34%)
Frame = +3
Query: 528 APFRSPPPXTXXPXAXRLGXPXXAPPRAGIRXPXXSGXXPGXXPXXPXXXPXGPAPRTKG 707
AP +P P T P + L P APPR I P P P P P P P +
Sbjct: 123 APPSAPAPPT--PQS-ELRPPTSAPPRPSIPPPS-----PASAPPIPSKAP--PIPSSLP 172
Query: 708 PXCXGXFPXXPXPPPTTHXXXXXPPVPXXXPPPAPXXXPGXXPPGKPPXXPPP 866
P P PP PP+P PPP P +P PP
Sbjct: 173 PPAQPAAPVKS-PPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPP 224
Score = 40.3 bits (90), Expect = 4e-04
Identities = 24/85 (28%), Positives = 29/85 (34%)
Frame = +3
Query: 666 PXXXPXGPAPRTKGPXCXGXFPXXPXPPPTTHXXXXXPPVPXXXPPPAPXXXPGXXPPGK 845
P P P+ P P P P++ P P PP AP P PP
Sbjct: 140 PTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSL-PSAVPPMP 198
Query: 846 PPXXPPPXSRPXPLXRXPGPALFPP 920
P PPP S+ P+ F P
Sbjct: 199 PKVPPPPLSQAPVANTSSRPSSFAP 223
Score = 35.5 bits (78), Expect = 0.011
Identities = 26/87 (29%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Frame = +3
Query: 666 PXXXPXGPAPRTKGPXCXGXFPXXPXPPPTTHXXXXXPPVPXXXPPPAPXXXPGXXPPGK 845
P P P P+++ P PPP+ PP+P PP P P PP +
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSP---ASAPPIP-SKAPPIPSSLP---PPAQ 176
Query: 846 P--PXXPPPXSRPXPLXRXPGPALFPP 920
P P PP + P P P PP
Sbjct: 177 PAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Score = 30.7 bits (66), Expect = 0.30
Identities = 16/56 (28%), Positives = 20/56 (35%)
Frame = +2
Query: 644 PRXXPXXPXXXPXGPXXPYQGPALPGXLPXXAPPPPNXPSXKXXAPGPXXAPPPXP 811
P+ P P P P PA +P APP P+ P +PP P
Sbjct: 133 PQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP 188
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 40.3 bits (90), Expect = 4e-04
Identities = 38/128 (29%), Positives = 41/128 (32%), Gaps = 2/128 (1%)
Frame = +3
Query: 543 PPPXTXXPXAXRLGXPXXAPPRAGIRXPXXSGXXPGXXPXXPXXXPXGPAPRTKGPXCXG 722
PPP P R P + RA P PG P P G A RT P
Sbjct: 363 PPPPRSAPSTGRQ-PPPLSSSRAVSNPPAPPPAIPGRSA--PALPPLGNASRTSTPPV-- 417
Query: 723 XFPXXPXPPPTTHXXXXXPPVPXXXPPPAPXXXPGXXP-PGKPPXXPP-PXSRPXPLXRX 896
P P PP+ P +P PP P P P P P PP P P
Sbjct: 418 --PTPPSLPPSA-----PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLP 470
Query: 897 PGPALFPP 920
P PP
Sbjct: 471 PAAPAPPP 478
Score = 39.9 bits (89), Expect = 5e-04
Identities = 35/148 (23%), Positives = 41/148 (27%), Gaps = 5/148 (3%)
Frame = +3
Query: 492 RPXXGXRGXXXGAPFRSPPPXTXXPXAXRL-----GXPXXAPPRAGIRXPXXSGXXPGXX 656
+P G P PPP + + L P PPR+ P P
Sbjct: 324 KPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSA---PSTGRQPPPLS 380
Query: 657 PXXPXXXPXGPAPRTKGPXCXGXFPXXPXPPPTTHXXXXXPPVPXXXPPPAPXXXPGXXP 836
P P P G P +T P +P PP P P P
Sbjct: 381 SSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLP 440
Query: 837 PGKPPXXPPPXSRPXPLXRXPGPALFPP 920
G P P P S P G PP
Sbjct: 441 MGAPAAPPLPPSAPIAPPLPAGMPAAPP 468
Score = 33.9 bits (74), Expect = 0.033
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = +2
Query: 644 PRXXPXXPXXXPXGPXXPYQGPALPGXLPXXAPPPPNXPSXKXXAPGPXXAPPPXP 811
P P P P P P P P LP P P P AP P AP P P
Sbjct: 433 PSAPPSLPMGAPAAPPLPPSAPIAP-PLPAGMPAAPPLP---PAAPAPPPAPAPAP 484
Score = 32.3 bits (70), Expect = 0.100
Identities = 20/65 (30%), Positives = 24/65 (36%), Gaps = 4/65 (6%)
Frame = +3
Query: 738 PXPP--PTTHXXXXXPPVPXXXPPPAPXXXPG--XXPPGKPPXXPPPXSRPXPLXRXPGP 905
P PP P++ P + PPP P G PP PP P S + P
Sbjct: 231 PIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKP 290
Query: 906 ALFPP 920
L PP
Sbjct: 291 PLPPP 295
Score = 31.9 bits (69), Expect = 0.13
Identities = 30/138 (21%), Positives = 36/138 (26%), Gaps = 1/138 (0%)
Frame = +3
Query: 495 PXXGXRGXXXGAPFRSPPPXTXXPXAXRLGXPXXAPPRAGIRXPXXSGXXPGXXPXXPXX 674
P G +P R P + P P PP + + + P P
Sbjct: 259 PSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPS 318
Query: 675 XPXGPAPRTKGPXCXGXFPXXPXPP-PTTHXXXXXPPVPXXXPPPAPXXXPGXXPPGKPP 851
P P P PP PP PPP P P P
Sbjct: 319 RRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPP---PRSAP--STG 373
Query: 852 XXPPPXSRPXPLXRXPGP 905
PPP S + P P
Sbjct: 374 RQPPPLSSSRAVSNPPAP 391
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = +3
Query: 729 PXXPXPPPTTHXXXXXPPVPXXXPPPAPXXXPGXXPPGKPPXXPPPXSR 875
P P PP ++ PP P P KPP PPP SR
Sbjct: 251 PAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPP-LPPPSSR 298
Score = 25.8 bits (54), Expect = 8.6
Identities = 15/52 (28%), Positives = 18/52 (34%), Gaps = 5/52 (9%)
Frame = +3
Query: 747 PPTTHXXXXXPPVPXXXPPPAPXXXPGXXPPGKPP-----XXPPPXSRPXPL 887
P +T P +P PP PP PP PP S P P+
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPI 275
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 35.5 bits (78), Expect = 0.011
Identities = 22/69 (31%), Positives = 26/69 (37%), Gaps = 2/69 (2%)
Frame = +3
Query: 720 GXFPXXPXPPPTTHXXXXXPP-VPXXXPPPAPXXXPGXXPPGKPPXXP-PPXSRPXPLXR 893
G P P P PP + PPP P P PP PP PP + P PL
Sbjct: 1680 GMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVP--PPPSAPPMPAGPPSAPPPPLPA 1737
Query: 894 XPGPALFPP 920
P++ P
Sbjct: 1738 SSAPSVPNP 1746
Score = 32.3 bits (70), Expect = 0.100
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = +2
Query: 635 GGXPRXXPXXPXXXPXGPXXPYQGPALPGXLPXXAPPPPNXPSXKXXAPGPXXAPPP 805
G P P P P P P PPPP+ P GP APPP
Sbjct: 1680 GMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAP---PMPAGPPSAPPP 1733
Score = 31.1 bits (67), Expect = 0.23
Identities = 23/76 (30%), Positives = 27/76 (35%)
Frame = +3
Query: 648 GXXPXXPXXXPXGPAPRTKGPXCXGXFPXXPXPPPTTHXXXXXPPVPXXXPPPAPXXXPG 827
G P P P P++ P P P PP + PP+P PP AP P
Sbjct: 1680 GMAPAHPVSTPP-VRPQSAAPPQMSA-PTPPPPPMSVPPPPSAPPMPAG-PPSAP---PP 1733
Query: 828 XXPPGKPPXXPPPXSR 875
P P P P R
Sbjct: 1734 PLPASSAPSVPNPGDR 1749
Score = 29.9 bits (64), Expect = 0.53
Identities = 17/61 (27%), Positives = 22/61 (36%), Gaps = 5/61 (8%)
Frame = +3
Query: 750 PTTHXXXXXPPVPXXXPPPAPXXXPG----XXPPGKPPXXPPPXSR-PXPLXRXPGPALF 914
P+ H PP P P PG P P P P S+ P + P P++
Sbjct: 1439 PSNHAPQVVPPAPMHAVAPVQPKAPGMVTNAPAPSSAPAPPAPVSQLPPAVPNVPVPSMI 1498
Query: 915 P 917
P
Sbjct: 1499 P 1499
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/33 (39%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = +2
Query: 716 PGXLPXXAPPPPNXPSXKXXAPGPXXAP-PPXP 811
P + AP P P AP P AP PP P
Sbjct: 1449 PAPMHAVAPVQPKAPGMVTNAPAPSSAPAPPAP 1481
Score = 25.8 bits (54), Expect = 8.6
Identities = 15/67 (22%), Positives = 20/67 (29%), Gaps = 1/67 (1%)
Frame = +3
Query: 513 GXXXGAPFRSPPPXTXXPXAXRLGXPXXAPPRAGIRXPXXSGXXPGXXP-XXPXXXPXGP 689
G P +PP ++ P PP + P + P P P P
Sbjct: 1680 GMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASS 1739
Query: 690 APRTKGP 710
AP P
Sbjct: 1740 APSVPNP 1746
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 35.5 bits (78), Expect = 0.011
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 783 VPXXXPPPAPXXXPGXXPPGKPPXXPPP 866
+P PPP P PG PP +PP PPP
Sbjct: 4 LPPGNPPPPPPP-PGFEPPSQPPPPPPP 30
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 834 PPGKPPXXPPPXSRPXPLXRXPGP 905
PPG PP PPP P P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 25.8 bits (54), Expect = 8.6
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 686 PXXPYQGPALPGXLPXXAPPPPNXP 760
P P P PG P PPPP P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 35.5 bits (78), Expect = 0.011
Identities = 27/79 (34%), Positives = 27/79 (34%), Gaps = 1/79 (1%)
Frame = -3
Query: 877 GRXXGG-GXXGGXPGGXXPGXXXGAGGGXXXGTGGXXFXXWVVGGGXGXXGKXPXQXGPL 701
G GG G GG GG PG G G G G GGG G P G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFG-- 241
Query: 700 VRGAGPXGXXXGXXGXXPG 644
G G G G G PG
Sbjct: 242 -GGPGGFGGGLGGFGGGPG 259
Score = 33.5 bits (73), Expect = 0.043
Identities = 24/60 (40%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
Frame = -3
Query: 877 GRXXGG-GXXGGXPGGXX--PGXXXGAGGGXXXGTGGXXFXXWVVGGGXGXXGKXPXQXG 707
G GG G GG PGG PG G GG G GG GGG G G P G
Sbjct: 217 GHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGF-------GGGPGGFGGGPGGHG 269
Score = 32.7 bits (71), Expect = 0.075
Identities = 24/79 (30%), Positives = 27/79 (34%)
Frame = -3
Query: 823 GXXXGAGGGXXXGTGGXXFXXWVVGGGXGXXGKXPXQXGPLVRGAGPXGXXXGXXGXXPG 644
G G GG G+GG GG G G+ G G GP G G G G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGF--G 241
Query: 643 XXPXFXGNRIPALGGAXXG 587
P G + GG G
Sbjct: 242 GGPGGFGGGLGGFGGGPGG 260
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 32.3 bits (70), Expect = 0.100
Identities = 26/107 (24%), Positives = 29/107 (27%)
Frame = +3
Query: 600 PPRAGIRXPXXSGXXPGXXPXXPXXXPXGPAPRTKGPXCXGXFPXXPXPPPTTHXXXXXP 779
P +G+ P S P P AP T P P P PPP
Sbjct: 148 PSASGVNAPTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNP-PPPPPPPPAVEDQAADA 206
Query: 780 PVPXXXPPPAPXXXPGXXPPGKPPXXPPPXSRPXPLXRXPGPALFPP 920
P P PP P + P P P P PP
Sbjct: 207 NEPDDYYSSGRAVSPEI-----PPTYTPKQADPLPAPPPPPPPTLPP 248
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 29.1 bits (62), Expect = 0.93
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 862 GGXXGGXPGGXXPGXXXGAGGGXXXG 785
GG GG PGG G GA GG G
Sbjct: 612 GGAPGGAPGGMPGGAPGGAPGGADNG 637
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 29.1 bits (62), Expect = 0.93
Identities = 22/73 (30%), Positives = 24/73 (32%), Gaps = 9/73 (12%)
Frame = +3
Query: 729 PXXPXPPPTTHXXXXX--PPVPXXX------PPPAPXXXPGXXPPGKPPXXPPPXSRPXP 884
P PPP H PP P PPP PG P P P P P
Sbjct: 203 PGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 262
Query: 885 -LXRXPGPALFPP 920
+ PG + PP
Sbjct: 263 PMHHEPGEHMPPP 275
Score = 29.1 bits (62), Expect = 0.93
Identities = 22/73 (30%), Positives = 24/73 (32%), Gaps = 9/73 (12%)
Frame = +3
Query: 729 PXXPXPPPTTHXXXXX--PPVPXXX------PPPAPXXXPGXXPPGKPPXXPPPXSRPXP 884
P PPP H PP P PPP PG P P P P P
Sbjct: 216 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 275
Query: 885 -LXRXPGPALFPP 920
+ PG + PP
Sbjct: 276 PMHHEPGEHMPPP 288
Score = 29.1 bits (62), Expect = 0.93
Identities = 22/73 (30%), Positives = 24/73 (32%), Gaps = 9/73 (12%)
Frame = +3
Query: 729 PXXPXPPPTTHXXXXX--PPVPXXX------PPPAPXXXPGXXPPGKPPXXPPPXSRPXP 884
P PPP H PP P PPP PG P P P P P
Sbjct: 229 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 288
Query: 885 -LXRXPGPALFPP 920
+ PG + PP
Sbjct: 289 PMHHEPGEHMPPP 301
Score = 29.1 bits (62), Expect = 0.93
Identities = 22/73 (30%), Positives = 24/73 (32%), Gaps = 9/73 (12%)
Frame = +3
Query: 729 PXXPXPPPTTHXXXXX--PPVPXXX------PPPAPXXXPGXXPPGKPPXXPPPXSRPXP 884
P PPP H PP P PPP PG P P P P P
Sbjct: 242 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 301
Query: 885 -LXRXPGPALFPP 920
+ PG + PP
Sbjct: 302 PMHHEPGEHMPPP 314
Score = 29.1 bits (62), Expect = 0.93
Identities = 22/73 (30%), Positives = 24/73 (32%), Gaps = 9/73 (12%)
Frame = +3
Query: 729 PXXPXPPPTTHXXXXX--PPVPXXX------PPPAPXXXPGXXPPGKPPXXPPPXSRPXP 884
P PPP H PP P PPP PG P P P P P
Sbjct: 255 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 314
Query: 885 -LXRXPGPALFPP 920
+ PG + PP
Sbjct: 315 PMHHEPGEHMPPP 327
Score = 29.1 bits (62), Expect = 0.93
Identities = 22/73 (30%), Positives = 24/73 (32%), Gaps = 9/73 (12%)
Frame = +3
Query: 729 PXXPXPPPTTHXXXXX--PPVPXXX------PPPAPXXXPGXXPPGKPPXXPPPXSRPXP 884
P PPP H PP P PPP PG P P P P P
Sbjct: 268 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 327
Query: 885 -LXRXPGPALFPP 920
+ PG + PP
Sbjct: 328 PMHHEPGEHMPPP 340
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 28.3 bits (60), Expect = 1.6
Identities = 21/63 (33%), Positives = 21/63 (33%)
Frame = -3
Query: 877 GRXXGGGXXGGXPGGXXPGXXXGAGGGXXXGTGGXXFXXWVVGGGXGXXGKXPXQXGPLV 698
GR G GG GG G G GG G GG GG G G G
Sbjct: 10 GRGGSRGGRGGFNGGRG-GFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAK 68
Query: 697 RGA 689
GA
Sbjct: 69 GGA 71
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/62 (27%), Positives = 19/62 (30%)
Frame = +3
Query: 690 APRTKGPXCXGXFPXXPXPPPTTHXXXXXPPVPXXXPPPAPXXXPGXXPPGKPPXXPPPX 869
APR + P P P P + PP P P PP P PP
Sbjct: 24 APRKREPARTVSTPAFMEPAPVSKKPLP-PPTRRLPRKPLPFRSTSLQPPSSQPPAPPTH 82
Query: 870 SR 875
R
Sbjct: 83 QR 84
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +3
Query: 747 PPTTHXXXXXPPVPXXXPPPAPXXXPGXXPPGKPPXXPPPXSRPXPLXRXPGPALFP 917
PPTT P P P P PP PP P P P P P
Sbjct: 494 PPTTFAPPGVPLPPIPGAPGMPNLNMSQ-PPMVPPGMALPPGMPAPFPGYPAVPAMP 549
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.2 bits (55), Expect = 6.5
Identities = 14/47 (29%), Positives = 16/47 (34%)
Frame = +3
Query: 738 PXPPPTTHXXXXXPPVPXXXPPPAPXXXPGXXPPGKPPXXPPPXSRP 878
P PPPT P + PP P PP PP +P
Sbjct: 908 PPPPPTASMTASAPAI---ASPPPPKVGETYHPPTASGTRVPPVQQP 951
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 25.8 bits (54), Expect = 8.6
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = -3
Query: 694 GAGPXGXXXGXXGXXP-GXXPXFXGNRIPALGGAXXGXPNR 575
G G G G G G F G R GGA G PNR
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGGRGRGRGGARSGNPNR 486
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Frame = -3
Query: 877 GRXXGGGXXG-GXPGGXXPGXXXGAGGG 797
G GGG G G PGG G GGG
Sbjct: 439 GSFPGGGFPGGGFPGGSYNSQGFGMGGG 466
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 25.8 bits (54), Expect = 8.6
Identities = 27/111 (24%), Positives = 31/111 (27%), Gaps = 5/111 (4%)
Frame = +3
Query: 543 PPPXTXXPXAXRLGXPXXAP--PRA-GIRXPXXSGXXPGXX--PXXPXXXPXGPAPRTKG 707
PP P + P AP P A + P + P P P AP
Sbjct: 577 PPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQ 636
Query: 708 PXCXGXFPXXPXPPPTTHXXXXXPPVPXXXPPPAPXXXPGXXPPGKPPXXP 860
P P P P P P PPA P +PP P
Sbjct: 637 PPAAPVVPEVPSVPQRP-AVPVVPEAPSVPQPPAAPVVPEVPSVPQPPAVP 686
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,335,344
Number of Sequences: 5004
Number of extensions: 35142
Number of successful extensions: 442
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 185
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 468512460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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