Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_H15
(974 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.41
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.41
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.41
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.9
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.9
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.9
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 5.0
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 6.6
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 28 8.8
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 25 9.8
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.41
Identities = 20/64 (31%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Frame = +3
Query: 705 PPXPPPLXXASXXFPPXXLPXA-PPXAXTWXXXPXXXGXXPXXGVXXXXXXXXXGXPXPP 881
PP PP L + PP P PP P G P G G P PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 882 RXPP 893
PP
Sbjct: 773 PPPP 776
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.41
Identities = 20/64 (31%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Frame = +3
Query: 705 PPXPPPLXXASXXFPPXXLPXA-PPXAXTWXXXPXXXGXXPXXGVXXXXXXXXXGXPXPP 881
PP PP L + PP P PP P G P G G P PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 882 RXPP 893
PP
Sbjct: 773 PPPP 776
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.41
Identities = 20/64 (31%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Frame = +3
Query: 705 PPXPPPLXXASXXFPPXXLPXA-PPXAXTWXXXPXXXGXXPXXGVXXXXXXXXXGXPXPP 881
PP PP L + PP P PP P G P G G P PP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Query: 882 RXPP 893
PP
Sbjct: 356 PPPP 359
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.9
Identities = 33/117 (28%), Positives = 34/117 (29%)
Frame = -3
Query: 915 SPPGXXXEGGXAGGGXXRXGEGGXAEXRQXXGXXPXXXXRXXRXRRXGXPXAGXXAGNXL 736
+PP GG GGG G GG A G G G G
Sbjct: 49 APPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGG- 107
Query: 735 KRLXGEGGWVGWXXXXXGQGXEGGXGXEPRGSXXXVXXGKXCVXGXXLXIGGGGXKG 565
G GG G G G GG G G G C G GGGG G
Sbjct: 108 GGCGGGGGGCGGGGGGCG-GGGGGCGGGGGGGCGGGSSG-GCGGGSSGGCGGGGGGG 162
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.9
Identities = 33/117 (28%), Positives = 34/117 (29%)
Frame = -3
Query: 915 SPPGXXXEGGXAGGGXXRXGEGGXAEXRQXXGXXPXXXXRXXRXRRXGXPXAGXXAGNXL 736
+PP GG GGG G GG A G G G G
Sbjct: 49 APPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGG- 107
Query: 735 KRLXGEGGWVGWXXXXXGQGXEGGXGXEPRGSXXXVXXGKXCVXGXXLXIGGGGXKG 565
G GG G G G GG G G G C G GGGG G
Sbjct: 108 GGCGGGGGGCGGGGGGCG-GGGGGCGGGGGGGCGGGSSG-GCGGGSSGGCGGGGGGG 162
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/65 (29%), Positives = 20/65 (30%), Gaps = 3/65 (4%)
Frame = +3
Query: 705 PPXPP---PLXXASXXFPPXXLPXAPPXAXTWXXXPXXXGXXPXXGVXXXXXXXXXGXPX 875
PP PP P S PP +PP T P G P G P
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 298
Query: 876 PPRXP 890
PP P
Sbjct: 299 PPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/65 (29%), Positives = 20/65 (30%), Gaps = 3/65 (4%)
Frame = +3
Query: 705 PPXPP---PLXXASXXFPPXXLPXAPPXAXTWXXXPXXXGXXPXXGVXXXXXXXXXGXPX 875
PP PP P S PP +PP T P G P G P
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 319
Query: 876 PPRXP 890
PP P
Sbjct: 320 PPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/65 (29%), Positives = 20/65 (30%), Gaps = 3/65 (4%)
Frame = +3
Query: 705 PPXPP---PLXXASXXFPPXXLPXAPPXAXTWXXXPXXXGXXPXXGVXXXXXXXXXGXPX 875
PP PP P S PP +PP T P G P G P
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 304
Query: 876 PPRXP 890
PP P
Sbjct: 305 PPPPP 309
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.5 bits (63), Expect = 3.8
Identities = 35/135 (25%), Positives = 35/135 (25%)
Frame = -3
Query: 969 GX*GTLGXXPGGRXXMTHSPPGXXXEGGXAGGGXXRXGEGGXAEXRQXXGXXPXXXXRXX 790
G G G G PP GG GGG G GG G
Sbjct: 37 GGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGG 96
Query: 789 RXRRXGXPXAGXXAGNXLKRLXGEGGWVGWXXXXXGQGXEGGXGXEPRGSXXXVXXGKXC 610
G G A G G G G G GG G G G C
Sbjct: 97 GGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGC 156
Query: 609 VXGXXLXIGGGGXKG 565
G GGGG G
Sbjct: 157 GGGGGGCGGGGGGCG 171
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.1 bits (62), Expect = 5.0
Identities = 34/132 (25%), Positives = 36/132 (27%)
Frame = -3
Query: 960 GTLGXXPGGRXXMTHSPPGXXXEGGXAGGGXXRXGEGGXAEXRQXXGXXPXXXXRXXRXR 781
G G GG PG GG GGG GG G
Sbjct: 127 GGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGG 186
Query: 780 RXGXPXAGXXAGNXLKRLXGEGGWVGWXXXXXGQGXEGGXGXEPRGSXXXVXXGKXCVXG 601
G G G G GG+ G G G G G P G G G
Sbjct: 187 GFGGGGMGGYGGG-----MGGGGYGGGGMGGGGYGGGGDGGYGPSGG-----YGGGYGPG 236
Query: 600 XXLXIGGGGXKG 565
+GGGG G
Sbjct: 237 GGYGMGGGGGGG 248
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = -3
Query: 951 GXXPGGRXXMTHSPPGXXXEGGXAGGGXXRXGEGG 847
G P +H+P G GG +GGG G G
Sbjct: 156 GGPPPPAPSFSHAPSGGYSSGGSSGGGYSSGGSSG 190
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.3 bits (60), Expect = 8.8
Identities = 32/128 (25%), Positives = 36/128 (28%), Gaps = 3/128 (2%)
Frame = -3
Query: 939 GGRXXMTHSPPGXXXEGGXAGGGXXRXGEGGXAEXRQXXGXXPXXXXRXXRXRRXGXPXA 760
GG ++ G GG GGG GG G R G
Sbjct: 44 GGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGR--GGGGR 101
Query: 759 GXXAGNXLKRLXGEGGWVGWXXXXXGQGXEGGXGXEPRGSXXXVXXGK---XCVXGXXLX 589
G GN G G W G G G G G RG G+ G
Sbjct: 102 GDWGGN---NNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPPGSNGGGDWG 158
Query: 588 IGGGGXKG 565
GGG +G
Sbjct: 159 GNGGGGRG 166
Score = 28.3 bits (60), Expect = 8.8
Identities = 31/109 (28%), Positives = 33/109 (30%)
Frame = -3
Query: 891 GGXAGGGXXRXGEGGXAEXRQXXGXXPXXXXRXXRXRRXGXPXAGXXAGNXLKRLXGEGG 712
GG GGG G GG G R G G GN +GG
Sbjct: 69 GGNNGGGGNWGGNGGGRG--DWGGNGGGGRGGGGRGDWGGNNNGG--GGNWGGGGNNDGG 124
Query: 711 WVGWXXXXXGQGXEGGXGXEPRGSXXXVXXGKXCVXGXXLXIGGGGXKG 565
W G G GG G + RG G G GGGG G
Sbjct: 125 WGGNNGGGGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRGG 173
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 24.6 bits (51), Expect(2) = 9.8
Identities = 19/71 (26%), Positives = 21/71 (29%), Gaps = 1/71 (1%)
Frame = -3
Query: 723 GEGGWVGWXXXXXGQGXEGGXGXEPRGSXXX-VXXGKXCVXGXXLXIGGGGXKGXXXEVL 547
G GG G G GG G P+ + G GGGG G
Sbjct: 363 GGGGGGGGAAAGGGYNAGGGGGGAPQAAPAPQAAPAPAAPAGGGYNAGGGGGAGGGGGYA 422
Query: 546 VGVGXXXVXRR 514
G G RR
Sbjct: 423 GGAGAGSYRRR 433
Score = 21.8 bits (44), Expect(2) = 9.8
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = -3
Query: 942 PGGRXXMTHSPPGXXXEGGXAGGGXXRXGEGGXA 841
P G P G G GGG R GG A
Sbjct: 318 PAGGGGGGDFPAGGGGGGYSTGGGGGRADSGGAA 351
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,039,109
Number of Sequences: 27780
Number of extensions: 194879
Number of successful extensions: 885
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2531861596
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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