Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_H14
         (841 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0447 + 17688248-17688319,17688414-17688515,17688852-176889...    42   6e-04
11_01_0632 - 5069425-5069441,5070656-5070809,5070889-5071050,507...    33   0.28 
11_08_0083 + 28256844-28258760                                         32   0.65 
11_03_0039 - 9145639-9146378,9149199-9149538                           30   2.0  
07_01_0139 - 1014952-1015165,1015271-1015350,1015420-1015629,101...    29   6.1  
07_03_1421 - 26451012-26451155,26451256-26451322,26451605-264516...    28   8.1  

>09_04_0447 +
           17688248-17688319,17688414-17688515,17688852-17688981,
           17689198-17689290,17689363-17689451,17689889-17689969,
           17690118-17690207,17690653-17690772,17690877-17690927,
           17691125-17691171,17691321-17691378,17691451-17691507
          Length = 329

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 44/206 (21%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
 Frame = +1

Query: 154 KLLIEGKTKQVFDVPDQPGYCLLLNKDRITAGDGVKAHDLEGKAAISNQTNAKVFEILKS 333
           +L  +GK + V++  +   + +L+  DR +A D V A  +  K  + N+T+   F+  + 
Sbjct: 18  RLAAKGKVRDVYESGE---HLVLVTTDRQSAFDRVLA-SIPFKGQVLNETSLWWFDRTRH 73

Query: 334 AGIKTAFVKIASETAFLSKKCEMIPIEWVTRRLATGS-----FLKRNPGV----PEGFRF 486
                A V    +   ++K+C + P+E+V R   TGS     +   N G         R 
Sbjct: 74  I-TPNAVVSSPDKNVTIAKRCSVFPVEFVVRGYVTGSTDTSLWTVYNKGARNYCGNVLRD 132

Query: 487 TPPKQETFFKDDANHDPQWSEEQI-ISAKFNYNGLLIGRDEVDYMRKATILIFEILEKAW 663
              K +    +      + ++  + ++ +   N  L+ +++ D  R   + +F   ++  
Sbjct: 133 GMVKNQKLSANILTPTTKAADHDVPVTPEEIINSGLMSKEDFDEARSKALSLFAYGQEVA 192

Query: 664 ALRDCAPIDMKIEFGVDTEGSIVLAD 741
                  +D K EFG   +G+I+L D
Sbjct: 193 LENGLILVDTKYEFGKTADGTIMLID 218


>11_01_0632 -
           5069425-5069441,5070656-5070809,5070889-5071050,
           5071270-5072199
          Length = 420

 Score = 33.1 bits (72), Expect = 0.28
 Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +1

Query: 583 GLLIGRDEVDYMRKATILIFEILEKAWALRDCAPIDM-KIEFGVDTE 720
           GL IG DE D  R   I +F  ++    LR CAP+DM +++F  D++
Sbjct: 61  GLRIGSDEEDTARVREIRVF--VDHLLLLRGCAPLDMCELKFWFDSD 105


>11_08_0083 + 28256844-28258760
          Length = 638

 Score = 31.9 bits (69), Expect = 0.65
 Identities = 20/51 (39%), Positives = 27/51 (52%)
 Frame = +1

Query: 409 IEWVTRRLATGSFLKRNPGVPEGFRFTPPKQETFFKDDANHDPQWSEEQII 561
           IE   RRL   S   R  GVP  FR    K ET  ++D + DP+  EE+++
Sbjct: 413 IEETGRRL---SICARQFGVPFKFRAIAAKWETVRREDLHLDPEEEEEEVL 460


>11_03_0039 - 9145639-9146378,9149199-9149538
          Length = 359

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
 Frame = +1

Query: 451 KRNPGVPEGF---RFTPPKQETFFKDDANHDPQWSEEQIISAKFNYNGLLIGRDEVDYM- 618
           KRNP VP+G+       P  ET   D   +  +++ + +  AKFN     I +  VD + 
Sbjct: 202 KRNPPVPQGYYGCGLVLPVAETLVADLCGNPLEYAVQLVRKAKFNVTDEYI-KSTVDMIA 260

Query: 619 -RKATILIFEILEKAWALRDCAPI-DMKIEFG 708
            RK   L   ++++ + + D   I + KI+FG
Sbjct: 261 SRKWPSL---VVDRTYVVSDITTIGEDKIDFG 289


>07_01_0139 -
           1014952-1015165,1015271-1015350,1015420-1015629,
           1015925-1016044,1016650-1016709,1017129-1017204,
           1018189-1018352,1018428-1018490,1018815-1018902,
           1018997-1019647,1019965-1020449
          Length = 736

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
 Frame = +1

Query: 55  RDPHRIGSSLHSYLRSKIAKMSHPKQVGQYKLGKLLIEGKTKQVFDVPD-QPGYCLLLNK 231
           R P  I S   S +     K+  P   GQ++ G+LL  G    V++  + Q G    + +
Sbjct: 330 RPPGAINSMQTSIVNQSAPKVEMPSVAGQWQKGRLLGSGTFGCVYEATNRQTGALCAMKE 389

Query: 232 DRITAGDGVKAHDLE 276
             I   D   A  L+
Sbjct: 390 VNIIPDDAKSAESLK 404


>07_03_1421 -
           26451012-26451155,26451256-26451322,26451605-26451657,
           26451736-26451806,26453340-26453482,26453858-26453919,
           26454008-26454100,26454203-26454314,26454432-26454547,
           26454625-26454787,26454829-26455349,26455429-26455528,
           26457472-26457552,26457666-26457877
          Length = 645

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +1

Query: 151 GKLLIEGKT-KQVFDVPDQPGYCLLLNKDRITAGDGVKAHDLEG 279
           G  L+ G+T K+  +V ++   CL LN  R   GD VK +   G
Sbjct: 349 GTSLVNGETQKKAEEVLEEVLLCLTLNNLRADRGDNVKENSCHG 392


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,967,010
Number of Sequences: 37544
Number of extensions: 524081
Number of successful extensions: 1286
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1285
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)