Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_H13
(849 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 28 1.5
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 28 1.9
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 2.5
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 3.4
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/48 (29%), Positives = 16/48 (33%)
Frame = +3
Query: 540 PPXLPSXPKXGGGGXXXPPPPXKXXXXXXGPPXPXPXXXASXXPXPPP 683
PP P+ P PP PP P P + P PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 26.6 bits (56), Expect = 4.4
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 540 PPXLPSXPKXGGGGXXXPPPP 602
PP P P G G PPPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPP 781
Score = 26.2 bits (55), Expect = 5.9
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +3
Query: 540 PPXLPSXPKXGGGGXXXPPPPXKXXXXXXGPPXPXPXXXAS 662
P +P P G PPPP PP P P S
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVS 786
Score = 25.8 bits (54), Expect = 7.8
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +3
Query: 540 PPXLPSXPKXGGGGXXXPPPPXKXXXXXXGPPXPXPXXXA 659
P +P GG PPPP PP P P A
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSA 787
Score = 25.8 bits (54), Expect = 7.8
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +3
Query: 594 PPPXKXXXXXXGPPXPXPXXXASXXPXPPP 683
PPP PP P A P PPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.9 bits (59), Expect = 1.9
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = +3
Query: 549 LPSXPKXGGGGXXXPPPPXKXXXXXXGPPXPXPXXXASXXPXPPPK 686
+P P G PPPP PP P P PP K
Sbjct: 298 MPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPFK 343
Score = 27.5 bits (58), Expect = 2.5
Identities = 13/44 (29%), Positives = 14/44 (31%)
Frame = +3
Query: 549 LPSXPKXGGGGXXXPPPPXKXXXXXXGPPXPXPXXXASXXPXPP 680
+P P G PPPP PP P P PP
Sbjct: 207 MPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 250
Score = 27.5 bits (58), Expect = 2.5
Identities = 13/44 (29%), Positives = 14/44 (31%)
Frame = +3
Query: 549 LPSXPKXGGGGXXXPPPPXKXXXXXXGPPXPXPXXXASXXPXPP 680
+P P G PPPP PP P P PP
Sbjct: 220 MPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 27.5 bits (58), Expect = 2.5
Identities = 13/44 (29%), Positives = 14/44 (31%)
Frame = +3
Query: 549 LPSXPKXGGGGXXXPPPPXKXXXXXXGPPXPXPXXXASXXPXPP 680
+P P G PPPP PP P P PP
Sbjct: 233 MPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 27.5 bits (58), Expect = 2.5
Identities = 13/44 (29%), Positives = 14/44 (31%)
Frame = +3
Query: 549 LPSXPKXGGGGXXXPPPPXKXXXXXXGPPXPXPXXXASXXPXPP 680
+P P G PPPP PP P P PP
Sbjct: 246 MPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 27.5 bits (58), Expect = 2.5
Identities = 13/44 (29%), Positives = 14/44 (31%)
Frame = +3
Query: 549 LPSXPKXGGGGXXXPPPPXKXXXXXXGPPXPXPXXXASXXPXPP 680
+P P G PPPP PP P P PP
Sbjct: 259 MPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 27.5 bits (58), Expect = 2.5
Identities = 13/44 (29%), Positives = 14/44 (31%)
Frame = +3
Query: 549 LPSXPKXGGGGXXXPPPPXKXXXXXXGPPXPXPXXXASXXPXPP 680
+P P G PPPP PP P P PP
Sbjct: 272 MPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 27.5 bits (58), Expect = 2.5
Identities = 13/44 (29%), Positives = 14/44 (31%)
Frame = +3
Query: 549 LPSXPKXGGGGXXXPPPPXKXXXXXXGPPXPXPXXXASXXPXPP 680
+P P G PPPP PP P P PP
Sbjct: 285 MPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.5 bits (58), Expect = 2.5
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 733 APPPPXPXXAXXXAAPXP 786
APPPP P A AAP P
Sbjct: 4 APPPPPPAPAPAAAAPAP 21
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.1 bits (57), Expect = 3.4
Identities = 21/65 (32%), Positives = 22/65 (33%), Gaps = 7/65 (10%)
Frame = +3
Query: 513 LXXXKXXKXPPXLPSX-----PKXGGGGXXX--PPPPXKXXXXXXGPPXPXPXXXASXXP 671
L K PP PS P G G PPPP G P P S P
Sbjct: 304 LAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGS-IPLPPQGRSAPP 362
Query: 672 XPPPK 686
PPP+
Sbjct: 363 PPPPR 367
Score = 26.2 bits (55), Expect = 5.9
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = +3
Query: 549 LPSXPKXGGGGXXXPPPPXKXXXXXXGPPXPXPXXXASXXPXPPP 683
+P P+ G PPPP PP S P PPP
Sbjct: 351 IPLPPQ--GRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 26.2 bits (55), Expect = 5.9
Identities = 12/44 (27%), Positives = 12/44 (27%)
Frame = +3
Query: 552 PSXPKXGGGGXXXPPPPXKXXXXXXGPPXPXPXXXASXXPXPPP 683
P P PPP PP P P P PP
Sbjct: 362 PPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPP 405
Score = 25.8 bits (54), Expect = 7.8
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = +3
Query: 591 PPPPXKXXXXXXGPPXPXPXXXASXXPXPPPKK 689
PPPP PP +S P PPP +
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPR 344
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,474,907
Number of Sequences: 5004
Number of extensions: 17180
Number of successful extensions: 87
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 420459900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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