Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_H12
         (913 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC142728-1|AAI42729.1|  417|Homo sapiens SAMD14 protein protein.       32   2.5  
BC141822-1|AAI41823.1|  417|Homo sapiens SAMD14 protein protein.       32   2.5  
BC047081-1|AAH47081.1|  427|Homo sapiens SAMD14 protein protein.       32   2.5  
BC029872-1|AAH29872.1|  247|Homo sapiens SAMD14 protein protein.       32   2.5  
AL500527-5|CAH72218.1| 1664|Homo sapiens peroxisome proliferator...    31   7.7  
AF325193-1|AAK11573.1| 1664|Homo sapiens PGC-1 related co-activa...    31   7.7  
AB011167-1|BAA25521.2| 1666|Homo sapiens KIAA0595 protein protein.     31   7.7  

>BC142728-1|AAI42729.1|  417|Homo sapiens SAMD14 protein protein.
          Length = 417

 Score = 32.3 bits (70), Expect = 2.5
 Identities = 22/78 (28%), Positives = 27/78 (34%)
 Frame = +3

Query: 477 KASXRPGTVKRPPLLAXFHRLRPP*XASQXSTLXSEVAXPDRTXKIPGVSPWXAPSLRPP 656
           K S   G+   P          P   ASQ STL  +   P  + KIP   PW       P
Sbjct: 246 KGSASSGSTTSPTCSPKHEGFSPKKSASQESTLSDDSTPPSSSPKIPS-GPWQEAKCSYP 304

Query: 657 CSRPLAAYPEYLXRPFLP 710
                 +  E+L  P  P
Sbjct: 305 YHTLSQSSDEFLDEPLPP 322


>BC141822-1|AAI41823.1|  417|Homo sapiens SAMD14 protein protein.
          Length = 417

 Score = 32.3 bits (70), Expect = 2.5
 Identities = 22/78 (28%), Positives = 27/78 (34%)
 Frame = +3

Query: 477 KASXRPGTVKRPPLLAXFHRLRPP*XASQXSTLXSEVAXPDRTXKIPGVSPWXAPSLRPP 656
           K S   G+   P          P   ASQ STL  +   P  + KIP   PW       P
Sbjct: 246 KGSASSGSTTSPTCSPKHEGFSPKKSASQESTLSDDSTPPSSSPKIPS-GPWQEAKCSYP 304

Query: 657 CSRPLAAYPEYLXRPFLP 710
                 +  E+L  P  P
Sbjct: 305 YHTLSQSSDEFLDEPLPP 322


>BC047081-1|AAH47081.1|  427|Homo sapiens SAMD14 protein protein.
          Length = 427

 Score = 32.3 bits (70), Expect = 2.5
 Identities = 22/78 (28%), Positives = 27/78 (34%)
 Frame = +3

Query: 477 KASXRPGTVKRPPLLAXFHRLRPP*XASQXSTLXSEVAXPDRTXKIPGVSPWXAPSLRPP 656
           K S   G+   P          P   ASQ STL  +   P  + KIP   PW       P
Sbjct: 256 KGSASSGSTTSPTCSPKHEGFSPKKSASQESTLSDDSTPPSSSPKIPS-GPWQEAKCSYP 314

Query: 657 CSRPLAAYPEYLXRPFLP 710
                 +  E+L  P  P
Sbjct: 315 YHTLSQSSDEFLDEPLPP 332


>BC029872-1|AAH29872.1|  247|Homo sapiens SAMD14 protein protein.
          Length = 247

 Score = 32.3 bits (70), Expect = 2.5
 Identities = 22/78 (28%), Positives = 27/78 (34%)
 Frame = +3

Query: 477 KASXRPGTVKRPPLLAXFHRLRPP*XASQXSTLXSEVAXPDRTXKIPGVSPWXAPSLRPP 656
           K S   G+   P          P   ASQ STL  +   P  + KIP   PW       P
Sbjct: 76  KGSASSGSTTSPTCSPKHEGFSPKKSASQESTLSDDSTPPSSSPKIPS-GPWQEAKCSYP 134

Query: 657 CSRPLAAYPEYLXRPFLP 710
                 +  E+L  P  P
Sbjct: 135 YHTLSQSSDEFLDEPLPP 152


>AL500527-5|CAH72218.1| 1664|Homo sapiens peroxisome
            proliferator-activated receptor gamma,pus laevis)
            protein.
          Length = 1664

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
 Frame = +3

Query: 438  QNQGITQXRTCEQKASXRPGTVKRPPLLAXFHRLRPP*XASQXSTLXSEVAXPDRTXKIP 617
            Q Q  T+ R+ +      P   + P  LA    L  P   ++ + L      P     +P
Sbjct: 762  QRQAETEERSPQPPTGKWPSLPETPTGLADIPCLVIPPAPAKKTALQRSPETPLEICLVP 821

Query: 618  -GVSPWXAPSLRPPCSRPLAAYP 683
             G SP  +PS  PP S+P+A+ P
Sbjct: 822  VGPSP-ASPSPEPPVSKPVASSP 843


>AF325193-1|AAK11573.1| 1664|Homo sapiens PGC-1 related co-activator
            protein.
          Length = 1664

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
 Frame = +3

Query: 438  QNQGITQXRTCEQKASXRPGTVKRPPLLAXFHRLRPP*XASQXSTLXSEVAXPDRTXKIP 617
            Q Q  T+ R+ +      P   + P  LA    L  P   ++ + L      P     +P
Sbjct: 762  QRQAETEERSPQPPTGKWPSLPETPTGLADIPCLVIPPAPAKKTALQRSPETPLEICLVP 821

Query: 618  -GVSPWXAPSLRPPCSRPLAAYP 683
             G SP  +PS  PP S+P+A+ P
Sbjct: 822  VGPSP-ASPSPEPPVSKPVASSP 843


>AB011167-1|BAA25521.2| 1666|Homo sapiens KIAA0595 protein protein.
          Length = 1666

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
 Frame = +3

Query: 438  QNQGITQXRTCEQKASXRPGTVKRPPLLAXFHRLRPP*XASQXSTLXSEVAXPDRTXKIP 617
            Q Q  T+ R+ +      P   + P  LA    L  P   ++ + L      P     +P
Sbjct: 764  QRQAETEERSPQPPTGKWPSLPETPTGLADIPCLVIPPAPAKKTALQRSPETPLEICLVP 823

Query: 618  -GVSPWXAPSLRPPCSRPLAAYP 683
             G SP  +PS  PP S+P+A+ P
Sbjct: 824  VGPSP-ASPSPEPPVSKPVASSP 845


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,641,987
Number of Sequences: 237096
Number of extensions: 1913081
Number of successful extensions: 6341
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6329
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11825849886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)