Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_H09
         (876 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical p...   161   5e-40
Z73098-4|CAD44145.1|  565|Caenorhabditis elegans Hypothetical pr...    29   5.8  
Z73098-3|CAD44144.1|  501|Caenorhabditis elegans Hypothetical pr...    29   5.8  
Z67880-1|CAA91794.1|  256|Caenorhabditis elegans Hypothetical pr...    29   5.8  
AF067936-5|AAC19211.1|  430|Caenorhabditis elegans Hypothetical ...    28   7.6  
AF067936-4|AAC19210.1|  903|Caenorhabditis elegans Hypothetical ...    28   7.6  

>U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical
           protein F13H8.7 protein.
          Length = 387

 Score =  161 bits (392), Expect = 5e-40
 Identities = 87/189 (46%), Positives = 114/189 (60%), Gaps = 2/189 (1%)
 Frame = +1

Query: 118 LESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXF--PAKDEQ 291
           +E+ +   L G  L+E  RI +GR       L+ SSI              +   A+ EQ
Sbjct: 11  VETALAEKLDGVSLDEVERILYGRPYRA---LEISSIAEKLAQDGDFQLSGYIVDAQKEQ 67

Query: 292 TRPPRIVKVGIVQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNMPF 471
           TR PR+V+V  +Q+ I  PT   V EQ+ AI  +V  +I+ A   G N+I  QE W MPF
Sbjct: 68  TRAPRLVRVAAIQNKIHRPTTDSVVEQRDAIHQRVGAMIEAAASAGANVIGLQEAWTMPF 127

Query: 472 AFCTREKQPWCEFAESDEDGPTTXFLRELAIKYAMVIVSSILERDEKPSDILWNTAVVIS 651
           AFCTRE+ PW EFAES   GPTT FL +LA+K+ +VI+S ILERDE+  D++WNTAVVIS
Sbjct: 128 AFCTRERLPWTEFAESVYTGPTTQFLSKLAVKHDIVIISPILERDEEKDDVIWNTAVVIS 187

Query: 652 DXGNVIGET 678
             G VIG +
Sbjct: 188 HTGRVIGRS 196



 Score = 85.0 bits (201), Expect = 6e-17
 Identities = 35/60 (58%), Positives = 40/60 (66%)
 Frame = +3

Query: 672 GNIARTHIPRVGXFNESNYXMEGTPGHPVFATRYGXIXVNXCFRRXHXLNWMMFGXNGPE 851
           G   + HIPRVG FNES Y ME T GHPVF T+YG I +N C+ R H  NWMM+  NG E
Sbjct: 194 GRSRKNHIPRVGDFNESTYYMESTLGHPVFETKYGRIGINICYGRHHPQNWMMYALNGAE 253


>Z73098-4|CAD44145.1|  565|Caenorhabditis elegans Hypothetical
           protein T21C9.3b protein.
          Length = 565

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +1

Query: 376 KAIFNKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 510
           K +F+  ++  D   +  +NI+ F E   MP   FC   +Q W  F
Sbjct: 46  KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90


>Z73098-3|CAD44144.1|  501|Caenorhabditis elegans Hypothetical
           protein T21C9.3a protein.
          Length = 501

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +1

Query: 376 KAIFNKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 510
           K +F+  ++  D   +  +NI+ F E   MP   FC   +Q W  F
Sbjct: 46  KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90


>Z67880-1|CAA91794.1|  256|Caenorhabditis elegans Hypothetical
           protein C34E7.3 protein.
          Length = 256

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = -2

Query: 554 SRRKXVVGPSSSDSANSHHGCFSLVQNAKGMFHNSWKQMMLTPSWPATS 408
           SR K     +SS   +  HG + +V+ AK  F + +++  +TPS P T+
Sbjct: 197 SRMKIRKDSNSSKKEDMEHGDWWIVRVAKMGFESCFQRRRITPSPPPTN 245


>AF067936-5|AAC19211.1|  430|Caenorhabditis elegans Hypothetical
           protein C24G6.2b protein.
          Length = 430

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 15/58 (25%), Positives = 28/58 (48%)
 Frame = +1

Query: 478 CTREKQPWCEFAESDEDGPTTXFLRELAIKYAMVIVSSILERDEKPSDILWNTAVVIS 651
           C  E +P C   E  ++G    FLRE   KY M +    +   + P +  ++T ++++
Sbjct: 154 CVTESEPLCLVVEYCDNGDLLKFLRE-RCKYMMKLDDLGINYHDPPENENYDTNMIVT 210


>AF067936-4|AAC19210.1|  903|Caenorhabditis elegans Hypothetical
           protein C24G6.2a protein.
          Length = 903

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 15/58 (25%), Positives = 28/58 (48%)
 Frame = +1

Query: 478 CTREKQPWCEFAESDEDGPTTXFLRELAIKYAMVIVSSILERDEKPSDILWNTAVVIS 651
           C  E +P C   E  ++G    FLRE   KY M +    +   + P +  ++T ++++
Sbjct: 627 CVTESEPLCLVVEYCDNGDLLKFLRE-RCKYMMKLDDLGINYHDPPENENYDTNMIVT 683


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,285,909
Number of Sequences: 27780
Number of extensions: 368910
Number of successful extensions: 1025
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)