Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_H07
         (1446 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332...    32   1.3  
06_03_0310 - 19453047-19453160,19453240-19453338,19453441-194535...    30   3.9  
10_07_0161 - 13674631-13675433,13675793-13675862                       29   6.9  
02_04_0400 - 22608519-22608844,22609044-22609122                       29   9.1  

>01_01_0446 +
           3321832-3322232,3322398-3322455,3322810-3323748,
           3324504-3324654,3324740-3324818,3325826-3325934
          Length = 578

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 19/54 (35%), Positives = 19/54 (35%)
 Frame = -3

Query: 946 GXXXXXRGEXXGWGGGGXXGGXXXXXXXXGXXXXRMGXGGXXWWCWRGGXXGXG 785
           G     RG   G GGGG  GG        G      G GG      RGG  G G
Sbjct: 44  GGGGGGRGRGGGGGGGGGYGGGGVGGGYGGGGGGYGGGGGGYGGGGRGGGGGGG 97


>06_03_0310 -
           19453047-19453160,19453240-19453338,19453441-19453513,
           19453598-19453708,19453795-19453956,19454064-19454340,
           19454542-19455160,19455256-19455471
          Length = 556

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 327 PXAPXXPPPXSLXLTXXKCPXIXPPLSKTPXP 422
           P AP  PPP +   T  + P   PP + TP P
Sbjct: 168 PHAPAPPPPQAPAPTPPQAPAPTPPRAPTPTP 199


>10_07_0161 - 13674631-13675433,13675793-13675862
          Length = 290

 Score = 29.5 bits (63), Expect = 6.9
 Identities = 15/41 (36%), Positives = 15/41 (36%)
 Frame = -3

Query: 907 GGGGXXGGXXXXXXXXGXXXXRMGXGGXXWWCWRGGXXGXG 785
           GGGG  GG        G    R   GG     W GG  G G
Sbjct: 186 GGGGWTGGGNGGGGSGGGGGARGSSGGGGGGGWAGGGGGQG 226


>02_04_0400 - 22608519-22608844,22609044-22609122
          Length = 134

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 16/47 (34%), Positives = 17/47 (36%)
 Frame = -3

Query: 925 GEXXGWGGGGXXGGXXXXXXXXGXXXXRMGXGGXXWWCWRGGXXGXG 785
           G   G GGGG  GG        G      G GG  +  W GG    G
Sbjct: 59  GGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGGYYPPWNGGYYPPG 105


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,219,407
Number of Sequences: 37544
Number of extensions: 87617
Number of successful extensions: 1360
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4594434768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)