Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_H07
         (1446 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X05285-1|CAA28903.1|  147|Drosophila melanogaster fibrillarin pr...    31   3.9  
AE013599-3536|AAF46950.1|  344|Drosophila melanogaster CG9888-PA...    31   3.9  

>X05285-1|CAA28903.1|  147|Drosophila melanogaster fibrillarin
           protein.
          Length = 147

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 19/54 (35%), Positives = 19/54 (35%)
 Frame = -3

Query: 946 GXXXXXRGEXXGWGGGGXXGGXXXXXXXXGXXXXRMGXGGXXWWCWRGGXXGXG 785
           G     RG   G GGGG   G        G    R G GG      RGG  G G
Sbjct: 24  GGGGGFRGRGGGGGGGGGGFGGGRGRGGGGDRGGRGGFGGGRGGGGRGGGGGGG 77


>AE013599-3536|AAF46950.1|  344|Drosophila melanogaster CG9888-PA
           protein.
          Length = 344

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 19/54 (35%), Positives = 19/54 (35%)
 Frame = -3

Query: 946 GXXXXXRGEXXGWGGGGXXGGXXXXXXXXGXXXXRMGXGGXXWWCWRGGXXGXG 785
           G     RG   G GGGG   G        G    R G GG      RGG  G G
Sbjct: 17  GGGGGFRGRGGGGGGGGGGFGGGRGRGGGGDRGGRGGFGGGRGGGGRGGGGGGG 70


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,547,686
Number of Sequences: 53049
Number of extensions: 121661
Number of successful extensions: 1298
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1163
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 7985782008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)