Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_H07
         (1446 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81555-7|CAB04518.1|  561|Caenorhabditis elegans Hypothetical pr...    30   4.7  
U97407-6|AAB52481.1|  751|Caenorhabditis elegans Tyrosinase prot...    29   8.2  

>Z81555-7|CAB04518.1|  561|Caenorhabditis elegans Hypothetical
           protein F58E10.3a protein.
          Length = 561

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 16/47 (34%), Positives = 18/47 (38%)
 Frame = -3

Query: 925 GEXXGWGGGGXXGGXXXXXXXXGXXXXRMGXGGXXWWCWRGGXXGXG 785
           G   G+GGGG  GG        G      G GG     + GG  G G
Sbjct: 19  GSRGGYGGGGRGGGGGGYSGGRGGGYGGGGGGGYGGGGYGGGGRGGG 65


>U97407-6|AAB52481.1|  751|Caenorhabditis elegans Tyrosinase protein
           4 protein.
          Length = 751

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 16/45 (35%), Positives = 17/45 (37%)
 Frame = -3

Query: 925 GEXXGWGGGGXXGGXXXXXXXXGXXXXRMGXGGXXWWCWRGGXXG 791
           G+  GWGG G  GG        G      G GG     W GG  G
Sbjct: 688 GDNGGWGGNG--GGGWGNNDPWGGSRWGGGRGGWGGGGWGGGGWG 730


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,932,915
Number of Sequences: 27780
Number of extensions: 54532
Number of successful extensions: 416
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 373
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4131451166
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)