Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_H01
         (881 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       25   1.2  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   4.9  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   6.5  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   6.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   6.5  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +2

Query: 629 PPXAXXXTPXIPXATTXTXPPPTPXXP 709
           PP A    P IP  +  +  PP P  P
Sbjct: 410 PPSAGAPMPPIPNMSNMSGMPPLPNMP 436



 Score = 23.8 bits (49), Expect = 2.1
 Identities = 14/40 (35%), Positives = 14/40 (35%), Gaps = 5/40 (12%)
 Frame = +2

Query: 530 SXXXPXQXPSPXFXPPPXXXXXKP-----PPPXXPPRXPP 634
           S   P   PSP   P        P     PPP  PP  PP
Sbjct: 17  SSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56



 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/26 (34%), Positives = 10/26 (38%)
 Frame = +2

Query: 686 PPPTPXXPLXXXPPPPGAXXXPXPPP 763
           P  +P  P    PP P     P  PP
Sbjct: 27  PHQSPQAPQRGSPPNPSQGPPPGGPP 52


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -1

Query: 455 VGGVFFXXSTTICLFIYSVDINSY 384
           + GVF+  STT+   +Y++  N +
Sbjct: 332 MSGVFYYLSTTVNPLLYNIMSNKF 355


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 247  CILRGPSPRPTLLQA 291
            C+LR  +P P +L+A
Sbjct: 1106 CVLRASTPAPVVLEA 1120


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -3

Query: 486 WXFLWLVFXXCXGG 445
           W FLW+VF     G
Sbjct: 2   WHFLWIVFLALANG 15


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 13/45 (28%), Positives = 17/45 (37%)
 Frame = +3

Query: 168 LTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSLPLS 302
           +TT  T+     TTT   T  N +     T   P+ D      LS
Sbjct: 658 ITTITTTTTTTTTTTTTTTTPNTTQNASATTPPPQVDEVDDKELS 702


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,598
Number of Sequences: 438
Number of extensions: 7675
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)