Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_G22
         (912 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0350 + 9239138-9240218,9240755-9240906,9241392-9241457,924...    31   1.7  
03_01_0082 + 653041-653137,653219-653496,653596-653689,653804-65...    29   6.8  
06_03_0975 - 26471438-26472109,26472189-26472284,26472372-264724...    28   9.0  

>02_02_0350 +
           9239138-9240218,9240755-9240906,9241392-9241457,
           9242715-9242951
          Length = 511

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 21/81 (25%), Positives = 30/81 (37%)
 Frame = +3

Query: 345 KTXKLEKPASRLNKQPVKLASRKTLKPAKTCWRQKXXXXXXXXXXXXXXXXXHPHFKLAE 524
           K   LE  A+R      KL S++ LK     W  K                 HP+ +  +
Sbjct: 47  KIFNLENVATREEANDAKLISKRNLKALTLVWSAKQLSIGSGVLDGLQP---HPNLRALD 103

Query: 525 KKN*FSSHCKTWLC*SSSIEG 587
            +N   S   TWLC    ++G
Sbjct: 104 IRNHGGSTGPTWLCGDVCVKG 124


>03_01_0082 +
           653041-653137,653219-653496,653596-653689,653804-653886,
           654027-654247,654395-654533,654628-654710,654824-655036,
           655099-655494,655587-655758,656085-656276,656363-656569,
           656661-656753,656957-657156,657329-657838,658114-658184,
           658322-658963,659057-659207,659425-659665
          Length = 1360

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 17/51 (33%), Positives = 21/51 (41%)
 Frame = +3

Query: 18  HYREFLRFCFVTMPPKKQPEKSGSPGQTRGKEXGNSQNXGWSX*GXGSFCS 170
           H RE    CF+       PEKS +     G E G  +  G S    G +CS
Sbjct: 784 HGREVHSLCFIDPAGYSNPEKSSNLYIATGCEDGTMRLTGNSINSAGKWCS 834


>06_03_0975 -
           26471438-26472109,26472189-26472284,26472372-26472482,
           26472494-26472530,26472566-26472576,26472674-26473050,
           26474310-26474895
          Length = 629

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = -3

Query: 304 GATAXCFRAKGCFRARPSCFRARPSCFRAXCP 209
           G  + C   KGCF   P CF A    F    P
Sbjct: 317 GTVSQCVLIKGCFSLFPDCFEAALDVFTEEPP 348


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,594,909
Number of Sequences: 37544
Number of extensions: 214712
Number of successful extensions: 541
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 538
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)