Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_G22
         (912 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosom...    29   6.7  
BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p pro...    29   6.7  
AE014296-2186|AAF49883.1|  697|Drosophila melanogaster CG10969-P...    29   6.7  
AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA ...    29   6.7  
U31961-18|AAA84417.1|  642|Drosophila melanogaster protein ( Dro...    29   8.8  
AE014297-2248|AAF55347.1|  630|Drosophila melanogaster CG10328-P...    29   8.8  

>DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosomal
           protein naturalvariant protein.
          Length = 277

 Score = 29.5 bits (63), Expect = 6.7
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +3

Query: 708 GTKKSSETCY*ST*GSEERL*KVNMGKRVRKIRXSVHFRR 827
           GT K+      +    ++++ K   G R RKIR +VHFRR
Sbjct: 130 GTAKAKAVALLNAKKVQKKIIKGAFGTRARKIRANVHFRR 169


>BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p
           protein.
          Length = 269

 Score = 29.5 bits (63), Expect = 6.7
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +3

Query: 708 GTKKSSETCY*ST*GSEERL*KVNMGKRVRKIRXSVHFRR 827
           GT K+      +    ++++ K   G R RKIR +VHFRR
Sbjct: 122 GTAKAKAVALLNAKKVQKKIIKGAFGTRARKIRTNVHFRR 161


>AE014296-2186|AAF49883.1|  697|Drosophila melanogaster CG10969-PA
           protein.
          Length = 697

 Score = 29.5 bits (63), Expect = 6.7
 Identities = 10/24 (41%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
 Frame = -3

Query: 289 CFRAKG-CFRARPSCFRARPSCFR 221
           CF+ +  CF+ +PSC + +PSC +
Sbjct: 331 CFQQQQPCFQQKPSCLQQKPSCLQ 354



 Score = 29.1 bits (62), Expect = 8.8
 Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = -3

Query: 289 CFRAK-GCFRARPSCFRARPSCFR 221
           C + K  C + +PSC + +PSCF+
Sbjct: 345 CLQQKPSCLQQKPSCLQQQPSCFQ 368


>AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA
           protein.
          Length = 277

 Score = 29.5 bits (63), Expect = 6.7
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +3

Query: 708 GTKKSSETCY*ST*GSEERL*KVNMGKRVRKIRXSVHFRR 827
           GT K+      +    ++++ K   G R RKIR +VHFRR
Sbjct: 130 GTAKAKAVALLNAKKVQKKIIKGAFGTRARKIRTNVHFRR 169


>U31961-18|AAA84417.1|  642|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 642

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 57  PPKKQPEKSGSPGQTRGKEXGNSQNXGWSX*GXGS 161
           PPK      G+P + + +  GN+QN G    G G+
Sbjct: 46  PPKLNAASDGNPAEKKARLGGNTQNGGGVAGGGGT 80


>AE014297-2248|AAF55347.1|  630|Drosophila melanogaster CG10328-PA
           protein.
          Length = 630

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 57  PPKKQPEKSGSPGQTRGKEXGNSQNXGWSX*GXGS 161
           PPK      G+P + + +  GN+QN G    G G+
Sbjct: 34  PPKLNAASDGNPAEKKARLGGNTQNGGGVAGGGGT 68


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,196,415
Number of Sequences: 53049
Number of extensions: 351240
Number of successful extensions: 1173
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1171
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4464466254
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)