Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_G21
(933 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 42 2e-04
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 35 0.019
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 32 0.13
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.23
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.23
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.31
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.54
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 29 1.2
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 28 1.6
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 28 2.2
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 28 2.2
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 5.0
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 6.6
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 8.7
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 8.7
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 41.5 bits (93), Expect = 2e-04
Identities = 20/48 (41%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Frame = +2
Query: 470 KXPPPPPXGXX---PFXFPPPXXPXPPKXXXXPPPPPXPGXXXVXXPP 604
K PPPPP P P P P P PPPPP PG PP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
Score = 35.1 bits (77), Expect = 0.014
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Frame = +1
Query: 478 PPPPXXXXXXSFSPPXXPXPPKXXTX---PPPXPXPGXXPXXXPPP 606
PPPP + +P P PP PPP P PG PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 32.3 bits (70), Expect = 0.10
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +2
Query: 476 PPPPPXGXXPFXFPPPXXPXPPKXXXXPPPPPXP 577
PPP P PPP P P PPPPP P
Sbjct: 752 PPPAPI----MGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 31.9 bits (69), Expect = 0.13
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +2
Query: 476 PPPPPXGXXPFXFPPPXXPXPPKXXXXPPPPPXP 577
P PPP P PP P PP PPPP P
Sbjct: 750 PVPPPA---PIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 31.9 bits (69), Expect = 0.13
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +2
Query: 476 PPPPPXGXXPFXFPPPXXPXPPKXXXXPPPPPXP 577
PP P G P PPP P PPPPP P
Sbjct: 753 PPAPIMGGPP---PPPPPPGVAGAGPPPPPPPPP 783
Score = 31.1 bits (67), Expect = 0.23
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = +1
Query: 478 PPPPXXXXXXSFSPPXXPXPPKXXTXPPPXPXPGXXPXXXPPPG 609
PPPP +P P P PPP P G P PPPG
Sbjct: 732 PPPPPPAVIVP-TPAPAPIP-----VPPPAPIMGGPPPPPPPPG 769
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Frame = +1
Query: 529 PXPPKXXTXPPPXPXPGXXPXXXPPPGGXLXXFPPXN-XGXXPP 657
P PP P P P P P P GG PP G PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPP 776
Score = 25.8 bits (54), Expect = 8.7
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 555 PPPXPPXRGXXXXPPPP 605
PPP PP PPPP
Sbjct: 763 PPPPPPGVAGAGPPPPP 779
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.7 bits (76), Expect = 0.019
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +2
Query: 476 PPPPPXGXXPFXFPPPXXPXPPKXXXXPPPPPXPGXXXVXXPPQG 610
PPPPP PPP P P PPPP P P G
Sbjct: 1707 PPPPPMSVP----PPPSAPPMPAGPPSAPPPPLPASSAPSVPNPG 1747
Score = 31.1 bits (67), Expect = 0.23
Identities = 16/49 (32%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
Frame = +1
Query: 463 PXXXXPPPPXXXXXXSFSPPXXPXPPKXXTXPPPXPX-PGXXPXXXPPP 606
P P P S P P PP PP P P P PPP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 30.7 bits (66), Expect = 0.31
Identities = 17/55 (30%), Positives = 17/55 (30%), Gaps = 1/55 (1%)
Frame = +2
Query: 443 GGXXXFXXXKXPPPPPXGXXPFXFPPPXXPXPPKXXXXPP-PPPXPGXXXVXXPP 604
GG PP P P P P PP PP PP P PP
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.9 bits (69), Expect = 0.13
Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Frame = +2
Query: 470 KXPPPPPXGXXPFXFPPPXXPXPPKXXXXPPPPP--XPGXXXVXXPPQG 610
K PPPPP PP PPPPP + PPQG
Sbjct: 309 KRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQG 357
Score = 31.5 bits (68), Expect = 0.18
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Frame = +2
Query: 476 PPPPPXGXXPFXF--PPPXXPXPPKXXXXPPPPPXPGXXXVXXPPQG 610
PPPPP P PPP PPP PG PP G
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLG 407
Score = 28.7 bits (61), Expect = 1.2
Identities = 20/65 (30%), Positives = 22/65 (33%), Gaps = 10/65 (15%)
Frame = +3
Query: 543 KXXXPPPXPPXRGXXXXPP----------PPRGXFXXXSPKXXXXLXPPKXXFXPPPXPK 692
K PPP PP R PP PP + L P PPP P+
Sbjct: 308 KKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPR 367
Query: 693 XAPXT 707
AP T
Sbjct: 368 SAPST 372
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/58 (29%), Positives = 19/58 (32%)
Frame = +1
Query: 433 PPGGXXXXFXPXXXXPPPPXXXXXXSFSPPXXPXPPKXXTXPPPXPXPGXXPXXXPPP 606
PP G PPPP S P PP+ + PPP P PP
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAGSI-----PLPPQGRSAPPPPPPRSAPSTGRQPP 377
Score = 27.5 bits (58), Expect = 2.9
Identities = 16/53 (30%), Positives = 16/53 (30%), Gaps = 1/53 (1%)
Frame = +1
Query: 478 PPPPXXXXXXSFSPPXXPXPPKXXTXPPPXPXPGXXPXXXP-PPGGXLXXFPP 633
PPPP PP PPP P P PP G PP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPP 364
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +1
Query: 478 PPPPXXXXXXSFSPPXXPXPPKXXTXPPPXPXPGXXPXXXPP 603
PP P +P P T PP P P P PP
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPP 429
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 476 PPPPPXGXXPFXFPPPXXPXPPKXXXXPPPPPXP 577
PP PP P PP P PPP P
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/61 (26%), Positives = 16/61 (26%)
Frame = +2
Query: 476 PPPPPXGXXPFXFPPPXXPXPPKXXXXPPPPPXPGXXXVXXPPQGXVXLXFPQXTXGPXP 655
PPP G PP P PP P PP L P P
Sbjct: 391 PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP 450
Query: 656 P 658
P
Sbjct: 451 P 451
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 31.1 bits (67), Expect = 0.23
Identities = 18/61 (29%), Positives = 20/61 (32%)
Frame = +2
Query: 476 PPPPPXGXXPFXFPPPXXPXPPKXXXXPPPPPXPGXXXVXXPPQGXVXLXFPQXTXGPXP 655
P P P PP P P+ P PP P V PQ P+ P P
Sbjct: 578 PVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQP 637
Query: 656 P 658
P
Sbjct: 638 P 638
Score = 29.5 bits (63), Expect = 0.71
Identities = 18/61 (29%), Positives = 20/61 (32%)
Frame = +2
Query: 476 PPPPPXGXXPFXFPPPXXPXPPKXXXXPPPPPXPGXXXVXXPPQGXVXLXFPQXTXGPXP 655
P P P P P P+ P PP P V PQ V P+ P P
Sbjct: 548 PAAPVVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQP 607
Query: 656 P 658
P
Sbjct: 608 P 608
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/62 (29%), Positives = 20/62 (32%), Gaps = 1/62 (1%)
Frame = +2
Query: 476 PPPPPXGXXPFXFPP-PXXPXPPKXXXXPPPPPXPGXXXVXXPPQGXVXLXFPQXTXGPX 652
PP P P P P P+ P PP P V PQ P+ P
Sbjct: 607 PPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQRPAVPVVPEAPSVPQ 666
Query: 653 PP 658
PP
Sbjct: 667 PP 668
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/47 (29%), Positives = 16/47 (34%)
Frame = +2
Query: 518 PPXXPXPPKXXXXPPPPPXPGXXXVXXPPQGXVXLXFPQXTXGPXPP 658
PP P P+ P PP P PQ V P+ P P
Sbjct: 577 PPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRP 623
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.1 bits (67), Expect = 0.23
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 1/61 (1%)
Frame = +2
Query: 476 PPPPPXGXXPFXFPPPXXPXPPKXXXXPPPPPXPG-XXXVXXPPQGXVXLXFPQXTXGPX 652
P P P P PP P PK PP P P V P G + P P
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPV 1239
Query: 653 P 655
P
Sbjct: 1240 P 1240
Score = 29.9 bits (64), Expect = 0.54
Identities = 18/62 (29%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Frame = +2
Query: 476 PPPPPXGXXPFXFPPPXXPXPPKXXXXPPPPPXPGXXXVXXPPQGXV-XLXFPQXTXGPX 652
P P P G P P P P PP P P PP + P P
Sbjct: 1151 PVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPV 1210
Query: 653 PP 658
PP
Sbjct: 1211 PP 1212
Score = 29.1 bits (62), Expect = 0.94
Identities = 15/59 (25%), Positives = 18/59 (30%)
Frame = +1
Query: 481 PPPXXXXXXSFSPPXXPXPPKXXTXPPPXPXPGXXPXXXPPPGGXLXXFPPXNXGXXPP 657
P P +P P PK PP P P P P + PP + P
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVP 1201
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Frame = +2
Query: 476 PPPPPXGXXPFXFPPPXXPXPPKXXXXPPPPPXP-GXXXVXXP 601
P P P G P P P PK PP P P G V P
Sbjct: 1084 PVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/59 (28%), Positives = 17/59 (28%)
Frame = +2
Query: 479 PPPPXGXXPFXFPPPXXPXPPKXXXXPPPPPXPGXXXVXXPPQGXVXLXFPQXTXGPXP 655
P P P P P PK PP P P P V P T P P
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/49 (28%), Positives = 15/49 (30%)
Frame = +3
Query: 555 PPPXPPXRGXXXXPPPPRGXFXXXSPKXXXXLXPPKXXFXPPPXPKXAP 701
PP P G P P G P + P P P P AP
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAP 1217
Score = 27.1 bits (57), Expect = 3.8
Identities = 16/60 (26%), Positives = 17/60 (28%)
Frame = +2
Query: 476 PPPPPXGXXPFXFPPPXXPXPPKXXXXPPPPPXPGXXXVXXPPQGXVXLXFPQXTXGPXP 655
P P P G P P P P PP P P G + P P P
Sbjct: 1113 PVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 476 PPPPPXGXXPFXFPPPXXPXPPKXXXXPPPPPXP 577
P PPP P P P P PP P P
Sbjct: 1209 PVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/58 (25%), Positives = 16/58 (27%)
Frame = +2
Query: 482 PPPXGXXPFXFPPPXXPXPPKXXXXPPPPPXPGXXXVXXPPQGXVXLXFPQXTXGPXP 655
P P G P P P P PP P P G + P P P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVP 1134
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/59 (25%), Positives = 16/59 (27%)
Frame = +2
Query: 479 PPPPXGXXPFXFPPPXXPXPPKXXXXPPPPPXPGXXXVXXPPQGXVXLXFPQXTXGPXP 655
P P P P P P PP P G V P + P P P
Sbjct: 1124 PKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP 1182
Score = 26.2 bits (55), Expect = 6.6
Identities = 19/63 (30%), Positives = 20/63 (31%), Gaps = 2/63 (3%)
Frame = +2
Query: 476 PPPPPXGXXPFXFPPPXXPXPPKXXXXPPPPPXP--GXXXVXXPPQGXVXLXFPQXTXGP 649
P P P G P P P P PP P P V P G + P P
Sbjct: 1132 PVPVPSGAPPVPKPSVAAPPVPAPSGAPP-VPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
Query: 650 XPP 658
PP
Sbjct: 1191 VPP 1193
Score = 25.8 bits (54), Expect = 8.7
Identities = 16/59 (27%), Positives = 19/59 (32%)
Frame = +3
Query: 555 PPPXPPXRGXXXXPPPPRGXFXXXSPKXXXXLXPPKXXFXPPPXPKXAPXTQXGXXPGG 731
PPP P P P G +P + PK PP PK + P G
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPV--PKPSVAAPPVPKPSVAVPPVPAPSG 1119
Score = 25.8 bits (54), Expect = 8.7
Identities = 18/60 (30%), Positives = 19/60 (31%), Gaps = 1/60 (1%)
Frame = +2
Query: 479 PPPPXGXXPFXFPPP-XXPXPPKXXXXPPPPPXPGXXXVXXPPQGXVXLXFPQXTXGPXP 655
P P G P P P PP P P P G V PP + P P P
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPV-PPPSTAPPVPTPSAGLPPVP 1230
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 30.7 bits (66), Expect = 0.31
Identities = 24/69 (34%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Frame = -2
Query: 635 FGGXXXKXPPGGGXXXGXXPGXGXGGGXVXFLGGXGXXGGEXEXXXXXXGGG-GXXXXGK 459
FGG PPG G G G G G GG G G E GGG G G
Sbjct: 193 FGGGSGGPPPGPGGFGGFG-GFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGL 251
Query: 458 KXXXXPPGG 432
PGG
Sbjct: 252 GGFGGGPGG 260
Score = 30.7 bits (66), Expect = 0.31
Identities = 19/45 (42%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = -1
Query: 606 WGGXXTXXXPGXGGGGGXXXXFGGX-GXXGGGK-XXGXXPXGGGG 478
+GG G GG GG FGG G GGG G P G GG
Sbjct: 226 FGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 28.7 bits (61), Expect = 1.2
Identities = 20/61 (32%), Positives = 21/61 (34%)
Frame = -1
Query: 657 GGXGPXVXWGKXX*TXPWGGXXTXXXPGXGGGGGXXXXFGGXGXXGGGKXXGXXPXGGGG 478
G GP G +GG G GGG GG G GGG GG G
Sbjct: 196 GSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFG 255
Query: 477 G 475
G
Sbjct: 256 G 256
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -1
Query: 576 GXGGGGGXXXXFGGXGXXGGGKXXGXXPXGGGGG 475
G GGG FGG G GG G GG GG
Sbjct: 184 GHNGGG-----FGGFGGGSGGPPPGPGGFGGFGG 212
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.9 bits (64), Expect = 0.54
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = +2
Query: 476 PPPPPXGXXPFXFPPPXXPXPPKXXXXPPPPPXPG 580
PPPPP PPP P + PPPPP PG
Sbjct: 9 PPPPP--------PPPGFEPPSQ----PPPPPPPG 31
Score = 29.5 bits (63), Expect = 0.71
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +1
Query: 517 PPXXPXPPKXXTXPPPXPXPGXXPXXXPPPG 609
PP P PP PPP P P PPPG
Sbjct: 5 PPGNPPPPP----PPPGFEPPSQPPPPPPPG 31
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Frame = -1
Query: 576 GXGG--GGGXXXXFGGXGXXGGGKXXGXXPXGGGGGXXXXXKXXXPP 442
G GG GGG GG G GG + GG GG K P
Sbjct: 31 GRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGAKVIIEP 77
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = -1
Query: 576 GXGGGGGXXXXFGGX--GXXGGGKXXGXXPXGGGGG 475
G GG G FGG G GGG+ GG GG
Sbjct: 17 GRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGG 52
Score = 27.1 bits (57), Expect = 3.8
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -1
Query: 576 GXGGGGGXXXXF-GGXGXXGGGKXXGXXPXGGGGG 475
G GG G F GG G GGG+ G GG GG
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGR--GGARGGGRGG 42
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +2
Query: 476 PPPPPXGXXPFXFPPPXXPXPPKXXXXPPPPPXPG 580
PPPPP P P PPK PP G
Sbjct: 908 PPPPPTASMTASAPAIASPPPPKVGETYHPPTASG 942
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 27.9 bits (59), Expect = 2.2
Identities = 21/78 (26%), Positives = 22/78 (28%), Gaps = 5/78 (6%)
Frame = +1
Query: 436 PGGXXXXFXPXXXXPPPPXXXXXXSFSP-----PXXPXPPKXXTXPPPXPXPGXXPXXXP 600
PG P PP FSP P P P + P P P
Sbjct: 279 PGSQPALVTPKHKMNVPPMGMYPLPFSPLPSAAPPIPFSPNVSSHPHMAFLPATVPTHSA 338
Query: 601 PPGGXLXXFPPXNXGXXP 654
PPG FP N P
Sbjct: 339 PPGFVPYDFPITNDKMYP 356
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 27.9 bits (59), Expect = 2.2
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 576 GXGGGGGXXXXFGGXGXXGGGKXXG 502
G GG G FGG G GGG+ G
Sbjct: 451 GGRGGFGGRGGFGGRGGFGGGRGRG 475
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Frame = -1
Query: 579 PGXGGGG-GXXXXFGGXGXXGGGKXXGXXPXGGGGG 475
P GGG G FGG G GG G G GG
Sbjct: 443 PRTGGGSRGGRGGFGGRGGFGGRGGFGGGRGRGRGG 478
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/50 (32%), Positives = 16/50 (32%), Gaps = 2/50 (4%)
Frame = +1
Query: 463 PXXXXPPPPXXXXXXSFS-PPXXPXPPKXXTXPPPXPXPG-XXPXXXPPP 606
P PP P S PP PP PP P P PPP
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 4/34 (11%)
Frame = +2
Query: 479 PPPPXGXXPFXFPP--PXXP--XPPKXXXXPPPP 568
PPP P PP P P PP PPPP
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/35 (37%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Frame = +2
Query: 503 PFXFPPPXXPXP-PKXXXXPPPPPXPGXXXVXXPP 604
P P P P P P PPPPP PP
Sbjct: 725 PQVTPAPPTPAPTPAVKHHPPPPPVRSSISPSMPP 759
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/43 (32%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Frame = +2
Query: 479 PPPPXGXXPFX-FPPPXXPXPPKXXXXPPPPPXPGXXXVXXPP 604
PPPP P PPP P PPP + PP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 250
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/43 (32%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Frame = +2
Query: 479 PPPPXGXXPFX-FPPPXXPXPPKXXXXPPPPPXPGXXXVXXPP 604
PPPP P PPP P PPP + PP
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/43 (32%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Frame = +2
Query: 479 PPPPXGXXPFX-FPPPXXPXPPKXXXXPPPPPXPGXXXVXXPP 604
PPPP P PPP P PPP + PP
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/43 (32%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Frame = +2
Query: 479 PPPPXGXXPFX-FPPPXXPXPPKXXXXPPPPPXPGXXXVXXPP 604
PPPP P PPP P PPP + PP
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/43 (32%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Frame = +2
Query: 479 PPPPXGXXPFX-FPPPXXPXPPKXXXXPPPPPXPGXXXVXXPP 604
PPPP P PPP P PPP + PP
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/43 (32%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Frame = +2
Query: 479 PPPPXGXXPFX-FPPPXXPXPPKXXXXPPPPPXPGXXXVXXPP 604
PPPP P PPP P PPP + PP
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/43 (32%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Frame = +2
Query: 479 PPPPXGXXPFX-FPPPXXPXPPKXXXXPPPPPXPGXXXVXXPP 604
PPPP P PPP P PPP + PP
Sbjct: 286 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/43 (32%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Frame = +2
Query: 479 PPPPXGXXPFX-FPPPXXPXPPKXXXXPPPPPXPGXXXVXXPP 604
PPPP P PPP P PPP + PP
Sbjct: 299 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +2
Query: 485 PPXGXXPFXFPPPXXPXPPKXXXXPPPPPXP 577
PP P P P PPPPP P
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,771,782
Number of Sequences: 5004
Number of extensions: 28550
Number of successful extensions: 408
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 214
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 473333082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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