Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_G09
         (921 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   2.2  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    23   3.0  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   3.0  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   5.2  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   6.8  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   6.8  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   9.0  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 13/49 (26%), Positives = 21/49 (42%)
 Frame = +2

Query: 215 TPTQVKDQPSVTFEAEADAFYTLVFTDPDNYDGPELVYREWHHWLVGNI 361
           TP  ++   S+    +  A   L+ +DP        VY +W HW   N+
Sbjct: 829 TPNLLRYFASIATNPKEQAQLNLLASDP-------AVYEDWRHWKFPNL 870


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 388 DSIGIHRLRNHPXVLGSI 441
           D+ G+H L   P +LG I
Sbjct: 327 DTCGVHNLHGMPGILGGI 344


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 696  PPXPPPPP 719
            PP PPPPP
Sbjct: 1355 PPPPPPPP 1362


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +2

Query: 50  YFFWRSYRHDVLIMSLVAQAFEASK 124
           +F+WR Y   V     + Q F  +K
Sbjct: 265 FFYWRIYNAAVSTTKAINQGFRTTK 289


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 699 PXPPPPPXR 725
           P PPPPP R
Sbjct: 374 PLPPPPPIR 382


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 699  PXPPPPPXR 725
            P PPPPP R
Sbjct: 1857 PEPPPPPPR 1865


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 337 PFTVDQLRSIVVIRVREHERIKSISLGLKSDR 242
           PF VDQ R +  + V  ++ + S SL + S++
Sbjct: 70  PFDVDQWRGMTFVTVPRYKGVPS-SLNVISEK 100


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,253
Number of Sequences: 438
Number of extensions: 6896
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29992872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)