Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_G08
         (857 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0426 + 20667639-20667938                                         29   3.6  
11_04_0312 - 16259612-16260231,16260264-16262796                       28   8.3  
04_04_0524 - 25916869-25916876,25917352-25917506,25917712-259178...    28   8.3  

>06_03_0426 + 20667639-20667938
          Length = 99

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = -3

Query: 177 SRSWLEVSADSSTTPALAASMHIANTSEKFHFVRSLSDRLQVCKSN 40
           SR++L  S   S + A+AAS  +   S     +R   DR Q+C+SN
Sbjct: 50  SRTFLLWSLKVSRSYAMAASSAVLKVSRVVKLLRWWQDREQLCRSN 95


>11_04_0312 - 16259612-16260231,16260264-16262796
          Length = 1050

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = -2

Query: 802 CGLPRRSRSYPSSKASLNWRL*MKNRTSFSYLAGWKNHCSLVLSALLP 659
           C L     SYP  KA +  ++ M   +S+++L G +     +L +L P
Sbjct: 392 CALSELESSYPLEKAEVLQKIYMPLESSYNHLEGDEKKSLFLLCSLFP 439


>04_04_0524 -
           25916869-25916876,25917352-25917506,25917712-25917841,
           25918013-25918094,25918180-25918213,25918271-25918327,
           25918686-25918791,25920755-25920881
          Length = 232

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -2

Query: 595 LYLVLWILKYTLLFSHQGNELPTDEFSMLV 506
           L L+ +IL+Y L F  + N LP D F+ LV
Sbjct: 47  LCLLWYILRYVLGFFQRYNLLPRDSFTFLV 76


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,606,772
Number of Sequences: 37544
Number of extensions: 446439
Number of successful extensions: 1277
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1277
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)