Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_G06
         (911 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373...    25   2.6  
04_03_0513 - 16681227-16683936,16685572-16685966                       29   3.9  

>01_06_0823 + 32234588-32234936,32236354-32237093,32237260-32237343,
            32237909-32239263,32240399-32240460,32240544-32241144,
            32241229-32241310,32241778-32241840
          Length = 1111

 Score = 24.6 bits (51), Expect(2) = 2.6
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +1

Query: 862  PXPPPKTPXLXXTQP 906
            P PPP  P L  TQP
Sbjct: 984  PPPPPSPPPLPITQP 998



 Score = 23.8 bits (49), Expect(2) = 2.6
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = +1

Query: 769  APXXLIITTXPPXTXXFXPGXSXVNTGXXPXPXPPP 876
            AP   I ++  P T    PG S   +   P P PPP
Sbjct: 937  APLPFIPSSVTPLTQF--PGGSAQQSEKRPPPPPPP 970


>04_03_0513 - 16681227-16683936,16685572-16685966
          Length = 1034

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +2

Query: 266  QQGLLHKHESLRKFHDDVQGRIPSQEFGILDLL 364
            Q G+LH+ ESL    +D+ G IP QE   LD L
Sbjct: 905  QLGMLHQLESLDLSSNDLSGEIP-QELASLDFL 936


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,242,627
Number of Sequences: 37544
Number of extensions: 318199
Number of successful extensions: 1166
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1147
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)