Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_G05
(901 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 38 0.002
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 36 0.010
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 35 0.014
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.073
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 33 0.073
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.17
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.29
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.52
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 28 1.6
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 37.9 bits (84), Expect = 0.002
Identities = 26/104 (25%), Positives = 31/104 (29%), Gaps = 7/104 (6%)
Frame = +3
Query: 603 PPXPXXXAXLRXGPPSXSXPHAPLXSXXSXXXXPPXPPPXGPXXXIXPTXGXXXXXXXS- 779
PP P + PP P + + S + PP P P G P+ S
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSV 1109
Query: 780 ------XPXGPPXXPPPPXRPXXXXVXPXXXPPPXPXXPXPPXP 893
P G P P P V P P P PP P
Sbjct: 1110 AVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVP 1153
Score = 36.7 bits (81), Expect = 0.004
Identities = 27/102 (26%), Positives = 30/102 (29%)
Frame = +3
Query: 588 PAXXXPPXPXXXAXLRXGPPSXSXPHAPLXSXXSXXXXPPXPPPXGPXXXIXPTXGXXXX 767
P+ PP P PS + P P S PP P P + P
Sbjct: 1145 PSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSG----IPPVPKPAAGVPPVPPPSEAPPV 1200
Query: 768 XXXSXPXGPPXXPPPPXRPXXXXVXPXXXPPPXPXXPXPPXP 893
S G P PPP P P P P PP P
Sbjct: 1201 PKPSV--GVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 31.9 bits (69), Expect = 0.13
Identities = 25/97 (25%), Positives = 27/97 (27%)
Frame = +3
Query: 603 PPXPXXXAXLRXGPPSXSXPHAPLXSXXSXXXXPPXPPPXGPXXXIXPTXGXXXXXXXSX 782
PP P PS + P P S PP P P G P+
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVA----VPPVPAPSGAPPVPKPSVAAPPVPV--- 1135
Query: 783 PXGPPXXPPPPXRPXXXXVXPXXXPPPXPXXPXPPXP 893
P G P P P P P P PP P
Sbjct: 1136 PSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
Score = 29.9 bits (64), Expect = 0.52
Identities = 24/100 (24%), Positives = 29/100 (29%)
Frame = +3
Query: 585 SPAXXXPPXPXXXAXLRXGPPSXSXPHAPLXSXXSXXXXPPXPPPXGPXXXIXPTXGXXX 764
+P+ PP P A + PP P P S PP PPP P+ G
Sbjct: 1173 APSSGIPPVPKPAAGVPPVPPPSEAPPVPKPS----VGVPPVPPPSTAPPVPTPSAGLPP 1228
Query: 765 XXXXSXPXGPPXXPPPPXRPXXXXVXPXXXPPPXPXXPXP 884
+ PP P P P P P
Sbjct: 1229 VPVPT-AKAPPVPAPSSEAPSVSTPRSSVPSPHSNASPSP 1267
Score = 28.7 bits (61), Expect = 1.2
Identities = 25/102 (24%), Positives = 28/102 (27%)
Frame = +3
Query: 588 PAXXXPPXPXXXAXLRXGPPSXSXPHAPLXSXXSXXXXPPXPPPXGPXXXIXPTXGXXXX 767
P+ PP P P+ S P P S + PP P P I G
Sbjct: 1027 PSADAPPIPVPSTAPPVPIPT-STPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPV 1085
Query: 768 XXXSXPXGPPXXPPPPXRPXXXXVXPXXXPPPXPXXPXPPXP 893
P G P P P PP PP P
Sbjct: 1086 PA---PSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVP 1124
Score = 28.7 bits (61), Expect = 1.2
Identities = 25/102 (24%), Positives = 29/102 (28%), Gaps = 3/102 (2%)
Frame = +3
Query: 588 PAXXXPPXPXXXAXLRXGPPSXSXPHAPLXSXXSXXXXPPXPPPXGPXXXIXPTXGXXXX 767
P+ PP P PS + P P+ S PP P P + G
Sbjct: 1107 PSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGA-----PPVPKPSVAAPPVPAPSGAPPV 1161
Query: 768 XXXSXPXGPPXXPP---PPXRPXXXXVXPXXXPPPXPXXPXP 884
S P P PP V P P P P P
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 26.6 bits (56), Expect = 4.8
Identities = 23/84 (27%), Positives = 25/84 (29%), Gaps = 5/84 (5%)
Frame = +3
Query: 648 SXSXPHAPLXSXXSXXXXPPXPPP-XGPXXXIXPTXGXXXXXXXSXPXGPPXXPPP---- 812
S P PL S + PP P P P I + P PP P P
Sbjct: 1018 SSKAPPVPLPSADA----PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEI 1073
Query: 813 PXRPXXXXVXPXXXPPPXPXXPXP 884
P P P P P P P
Sbjct: 1074 PSIPAPSGAPPVPAPSGIPPVPKP 1097
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 35.5 bits (78), Expect = 0.010
Identities = 26/85 (30%), Positives = 27/85 (31%), Gaps = 3/85 (3%)
Frame = +3
Query: 642 PPSXSXPHAPLXSXXSXXXXPPXP--PPXGPXXXIXPTXGXXXXXXXSXPXGPPXXPPPP 815
PPS P P PP P PP P P S P PP P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASA-PPIPSKAPPIPSSLP--PPAQPAAP 180
Query: 816 XR-PXXXXVXPXXXPPPXPXXPXPP 887
+ P P PP P P PP
Sbjct: 181 VKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 30.7 bits (66), Expect = 0.29
Identities = 28/105 (26%), Positives = 31/105 (29%), Gaps = 2/105 (1%)
Frame = +3
Query: 585 SPAXXXPPXPXXXAXLRXGPPSXSXPHAPLXSXXSXXXXPPXPPPXGPXXXIXPTXGXXX 764
SPA PP P + P + P AP+ S S P PP P P
Sbjct: 153 SPASA-PPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPV 211
Query: 765 XXXXSXPXGPPXXPPPPXRPXXXXVXP--XXXPPPXPXXPXPPXP 893
S P PP P P P P PP P
Sbjct: 212 ANTSSRPSS--FAPPAGHAPNVTSESPKFPNRGPSIPSASVPPVP 254
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.1 bits (77), Expect = 0.014
Identities = 23/83 (27%), Positives = 24/83 (28%)
Frame = +3
Query: 645 PSXSXPHAPLXSXXSXXXXPPXPPPXGPXXXIXPTXGXXXXXXXSXPXGPPXXPPPPXRP 824
P S P P S PP P P P+ S P G P PP P
Sbjct: 396 PGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSL--PPSAPPSLPMGAPAAPPLPPSA 453
Query: 825 XXXXVXPXXXPPPXPXXPXPPXP 893
P P P P P P
Sbjct: 454 PIAPPLPAGMPAAPPLPPAAPAP 476
Score = 31.5 bits (68), Expect = 0.17
Identities = 32/113 (28%), Positives = 34/113 (30%), Gaps = 7/113 (6%)
Frame = +3
Query: 576 GKVSPAXXXPPXPXXXAXLRXGPPSXSXPHAPLXSXX-------SXXXXPPXPPPXGPXX 734
G VS PP P + S S P P S + PP PPP
Sbjct: 262 GTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRN 321
Query: 735 XIXPTXGXXXXXXXSXPXGPPXXPPPPXRPXXXXVXPXXXPPPXPXXPXPPXP 893
P G S PP PPPP P PP P PP P
Sbjct: 322 RGKPPIGNGS----SNSSLPP--PPPP--PRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 30.7 bits (66), Expect = 0.29
Identities = 26/106 (24%), Positives = 29/106 (27%), Gaps = 3/106 (2%)
Frame = +3
Query: 585 SPAXXXPPXPXXXAXLRXGPPSXSXPHAPLXSXXSXXXXPPXPPPXGPXXX--IXPTXGX 758
S A PP P R P +A S P PP P P+
Sbjct: 382 SRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPM 441
Query: 759 XXXXXXSXPXGPPXXPP-PPXRPXXXXVXPXXXPPPXPXXPXPPXP 893
P P PP P P + P PP P P P
Sbjct: 442 GAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 27.5 bits (58), Expect = 2.7
Identities = 25/103 (24%), Positives = 30/103 (29%), Gaps = 6/103 (5%)
Frame = +3
Query: 603 PPXPXXXAXLRXGPPSXSXPHAPLXSXXSXXXXPPXPPPXGPXXXIXPTXGXXXXXXXSX 782
PP P + G P P+ + S PP PPP P + +
Sbjct: 311 PPPPPPPSRRNRGKP-------PIGNGSSNSSLPPPPPP--PRSNAAGSIPLPPQGRSAP 361
Query: 783 PXGPPXXPP------PPXRPXXXXVXPXXXPPPXPXXPXPPXP 893
P PP P PP P PP P P P
Sbjct: 362 PPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALP 404
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.7 bits (71), Expect = 0.073
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 783 PXGPPXXPPPPXRPXXXXVXPXXXPPPXPXXPXPPXP 893
P P PPPP P P PPP P P P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/38 (36%), Positives = 15/38 (39%), Gaps = 4/38 (10%)
Frame = +2
Query: 767 PPXLXXXXPPPP----XPXPXXPXSXXRFXXXPPPPXP 868
PP + PPPP P P P PPPP P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 32.7 bits (71), Expect = 0.073
Identities = 22/79 (27%), Positives = 24/79 (30%)
Frame = +3
Query: 642 PPSXSXPHAPLXSXXSXXXXPPXPPPXGPXXXIXPTXGXXXXXXXSXPXGPPXXPPPPXR 821
PPS + P L S + PP PPP P S PP
Sbjct: 173 PPSAAAPATSLPSDYN----PPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYT 228
Query: 822 PXXXXVXPXXXPPPXPXXP 878
P P PPP P P
Sbjct: 229 PKQADPLPAPPPPPPPTLP 247
Score = 31.5 bits (68), Expect = 0.17
Identities = 25/84 (29%), Positives = 25/84 (29%), Gaps = 2/84 (2%)
Frame = +3
Query: 642 PPSXSXPHA--PLXSXXSXXXXPPXPPPXGPXXXIXPTXGXXXXXXXSXPXGPPXXPPPP 815
PPS P A P S S PP PPP P S PP
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPPPPPP-PAVEDQAADANEPDDYYSSGRAVSPEIPPT 226
Query: 816 XRPXXXXVXPXXXPPPXPXXPXPP 887
P P PPP P PP
Sbjct: 227 YTPKQ--ADPLPAPPPPPPPTLPP 248
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.5 bits (68), Expect = 0.17
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = -3
Query: 806 GXXGGAXXXRGXXXGXXPXXXGDXGXRXXGGRXGRXGXAGGXG 678
G GG+ RG G G G GGR G G GG G
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRG 51
Score = 27.1 bits (57), Expect = 3.6
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Frame = -3
Query: 893 GXGGXXGXXGG--GGXXXXXNXPXXXAXXGXGXXGGAXXXRGXXXG 762
G GG G GG GG A G G GGA RG G
Sbjct: 17 GRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSG 62
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 30.7 bits (66), Expect = 0.29
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +3
Query: 714 PPXGPXXXIXPTXGXXXXXXXSXPXGPPXXPPPPXRPXXXXVXPXXXPPPXP 869
PP P I PT PPPP P P PPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.1 bits (62), Expect = 0.90
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +2
Query: 767 PPXLXXXXPPPPXPXPXXPXSXXRFXXXPPPPXP 868
PP P P P P P + PPPP P
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 795 PXXPPPPXRPXXXXVXPXXXPPPXPXXPXPPXP 893
P PPP P PPP P PP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPP 764
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.9 bits (64), Expect = 0.52
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 792 PPXXPPPPXRPXXXXVXPXXXPPPXPXXPXPP 887
PP PPPP P P PP P P PP
Sbjct: 5 PPGNPPPPPPP------PGFEPPSQPPPPPPP 30
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = +3
Query: 606 PXPXXXAXLRXGPPSXSXPHAPLXSXXSXXXXPPXPPPXGP 728
P P P + S P AP+ + S P PPP P
Sbjct: 1062 PAPSTVTSAASSPSNISKPSAPVANNVSKPSAVPPPPPPPP 1102
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,056,970
Number of Sequences: 5004
Number of extensions: 29199
Number of successful extensions: 195
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 128
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 454497130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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