Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_G04
         (832 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    25   0.65 
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   4.6  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   8.0  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   8.0  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   8.0  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   8.0  

>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 25.4 bits (53), Expect = 0.65
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
 Frame = +2

Query: 296 YNREIFNDDRGKLTGQAYGTRVLGPGGDSTNYGG---RLDWANKNAQATIDLNRQIGGR 463
           Y + ++  D+  +TG AYG   + PG  S  + G     ++ N   +   ++ R  GGR
Sbjct: 60  YKQRVY--DKNGMTGDAYGGLNIRPGQPSRQHAGFEFGKEYKNGFIKGQSEVQRGPGGR 116


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -2

Query: 822 FLGNVIFLINCTXNPS*QS-TRSYLSN 745
           F+GN+I  I    NPS Q+ T  YL N
Sbjct: 48  FVGNIITCIVIWRNPSMQTPTNYYLFN 74


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 138 FCVNTHQSCSEDIKQICIHFELYQVSLLKTE 46
           + VNT Q  + D +Q  IH+E  Q ++L T+
Sbjct: 276 YYVNTEQFRTSDYQQNDIHYEGVQ-NILDTQ 305


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 100 YIFATTLVCVNAEVYGPSDYAEDYSISGQSSRPT 201
           ++FA T  C+N  VYG  +  +    +  S+RPT
Sbjct: 302 FLFACTNSCMNPIVYGAFNIRDR---NKTSARPT 332


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 138 FCVNTHQSCSEDIKQICIHFELYQVSLLKTE 46
           + VNT Q  + D +Q  IH+E  Q ++L T+
Sbjct: 276 YYVNTEQFRTSDYQQNDIHYEGVQ-NILDTQ 305


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 138 FCVNTHQSCSEDIKQICIHFELYQVSLLKTE 46
           + VNT Q  + D +Q  IH+E  Q ++L T+
Sbjct: 276 YYVNTEQFRTSDYQQNDIHYEGVQ-NILDTQ 305


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,387
Number of Sequences: 438
Number of extensions: 5391
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26581563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)