Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_G02
(952 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 45 2e-05
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 42 2e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 40 5e-04
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 39 0.001
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 39 0.001
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 38 0.003
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 38 0.003
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 35 0.019
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 31 0.18
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 31 0.24
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 30 0.55
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.73
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 28 1.7
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 5.1
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 27 5.1
SPBC800.09 |sum2||G2/M transition checkpoint protein Sum2|Schizo... 27 5.1
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 26 9.0
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 44.8 bits (101), Expect = 2e-05
Identities = 41/124 (33%), Positives = 44/124 (35%), Gaps = 18/124 (14%)
Frame = +1
Query: 622 GRXPPRXPPXPPXXXPPXG---PPXPXN---AGXPAPAPXXPXXG-PA-PPXXPLSRXGX 777
GR P PP PP P G PP + + PAP P P PA PP SR
Sbjct: 357 GRSAP--PPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTST 414
Query: 778 XPAPXP-----GGXXHPPXGAPXXXXRG----PPXXXXPPXGPPXGPGLXGR-XXPPRXX 927
P P P P AP G PP P PP G+ PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 928 APPP 939
APPP
Sbjct: 475 APPP 478
Score = 40.3 bits (90), Expect = 4e-04
Identities = 35/114 (30%), Positives = 37/114 (32%), Gaps = 12/114 (10%)
Frame = +1
Query: 637 RXPPXPPXXXPPXGPPXPXNAGXPA--PAPXXPXXGPAPPXXPLSRXGXXPAPXPGGXXH 810
R PP PP G P N + P P P A PL G P P
Sbjct: 310 RPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPP----- 364
Query: 811 PPXGAPXXXXRGPPXXXX-----PPXGPPXGPGLXGRXXPP-----RXXAPPPP 942
PP AP + PP PP PP PG PP R PP P
Sbjct: 365 PPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVP 418
Score = 37.9 bits (84), Expect = 0.002
Identities = 21/57 (36%), Positives = 22/57 (38%), Gaps = 4/57 (7%)
Frame = +1
Query: 631 PPRXPPXPPXXXP---PXGPPXPXNAGXPAPAP-XXPXXGPAPPXXPLSRXGXXPAP 789
PP PP P P P PP P +A P P P P PP P PAP
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 36.7 bits (81), Expect = 0.005
Identities = 30/110 (27%), Positives = 33/110 (30%), Gaps = 2/110 (1%)
Frame = +1
Query: 625 RXPPRXPPXPPXXXPPXGPPXPXNAGXPAPAPXXPXXGPAPPXXPLSRXGXXPAPXPGGX 804
R P R P PP PP P +P P P ++ P P P
Sbjct: 240 RPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRP-IAPVSMNPAINSTSKPPLPPPSSR 298
Query: 805 XH-PPXGAPXXXXRGPPXXXXPPXG-PPXGPGLXGRXXPPRXXAPPPPXR 948
A PP G PP G G PP PPPP R
Sbjct: 299 VSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPP----PPPPPR 344
Score = 36.3 bits (80), Expect = 0.006
Identities = 29/94 (30%), Positives = 31/94 (32%), Gaps = 8/94 (8%)
Frame = +1
Query: 622 GRXPPRXPPX--------PPXXXPPXGPPXPXNAGXPAPAPXXPXXGPAPPXXPLSRXGX 777
GR P PP PP PP PP + P+ P P PA P P S
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIA 456
Query: 778 XPAPXPGGXXHPPXGAPXXXXRGPPXXXXPPXGP 879
P P G PP P PP P P
Sbjct: 457 PPLP-AGMPAAPP--LPPAAPAPPPAPAPAPAAP 487
Score = 31.9 bits (69), Expect = 0.14
Identities = 28/112 (25%), Positives = 31/112 (27%), Gaps = 9/112 (8%)
Frame = +1
Query: 631 PPRXPPXP-------PXXXPPXGPPXPXNAGXPAPAPXXPXXGPAPPXXPLSRXGXXPAP 789
PP PP P P PP P + + A PP P SR P
Sbjct: 267 PPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPP 326
Query: 790 XPGGXXHP--PXGAPXXXXRGPPXXXXPPXGPPXGPGLXGRXXPPRXXAPPP 939
G + P P PP G P R P PPP
Sbjct: 327 IGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 28.3 bits (60), Expect = 1.7
Identities = 22/85 (25%), Positives = 24/85 (28%)
Frame = +1
Query: 694 NAGXPAPAPXXPXXGPAPPXXPLSRXGXXPAPXPGGXXHPPXGAPXXXXRGPPXXXXPPX 873
+AG P P P P R AP P P G PP P
Sbjct: 220 SAGTPTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAP-- 277
Query: 874 GPPXGPGLXGRXXPPRXXAPPPPXR 948
P + PP PPP R
Sbjct: 278 -VSMNPAINSTSKPP---LPPPSSR 298
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 41.5 bits (93), Expect = 2e-04
Identities = 34/92 (36%), Positives = 34/92 (36%), Gaps = 4/92 (4%)
Frame = -3
Query: 938 GGGAXXLGGXXRPXRPGPXG----GPXGGXXXXGGPRXXXXGAPXGGCXXPPGXGAGXXP 771
GGG GG PGP G G GG G G P GG PG G G P
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGP-GGFEGGPG-GFGGGP 244
Query: 770 XRERGXXGGAGPXXGXXGAGAGXPAXXGXGGP 675
G GG G G G G G G GGP
Sbjct: 245 GGFGGGLGGFGGGPGGFGGGPG-----GHGGP 271
Score = 34.7 bits (76), Expect = 0.019
Identities = 27/71 (38%), Positives = 27/71 (38%), Gaps = 5/71 (7%)
Frame = -3
Query: 827 GAPXGGCXXPP----GXGAGXXPXRERGXXGGAGPXXGXXGAGAGXPAXXGXGGPXG-GX 663
G GG PP G G E GG G G G G P G GGP G G
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFG-GGPGGFGG 249
Query: 662 XXGGXGGXRGG 630
GG GG GG
Sbjct: 250 GLGGFGGGPGG 260
Score = 29.1 bits (62), Expect = 0.96
Identities = 29/90 (32%), Positives = 29/90 (32%), Gaps = 9/90 (10%)
Frame = -3
Query: 941 GGGGAXXLGGXXRPXRPGPXGG---------PXGGXXXXGGPRXXXXGAPXGGCXXPPGX 789
GG G G P PG GG GG GG G P G P G
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGF 247
Query: 788 GAGXXPXRERGXXGGAGPXXGXXGAGAGXP 699
G G G GG G G G G G P
Sbjct: 248 GGGLG-----GFGGGPGGFGGGPG-GHGGP 271
Score = 27.9 bits (59), Expect = 2.2
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 4/48 (8%)
Frame = -3
Query: 761 RGXXGGAGPXXGXXGAGAGXPAXXGXGGPXG----GXXXGGXGGXRGG 630
RG GG G G+G P G GG G G GG GG GG
Sbjct: 183 RGHNGGGFGGFGG-GSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGG 229
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 39.9 bits (89), Expect = 5e-04
Identities = 31/104 (29%), Positives = 33/104 (31%), Gaps = 2/104 (1%)
Frame = +1
Query: 646 PXPPXXXPPXGPPXPXNAGXPAP--APXXPXXGPAPPXXPLSRXGXXPAPXPGGXXHPPX 819
P P PP P PAP AP P A P P+ G P P P PP
Sbjct: 1095 PKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP-SGAPPVPKP-SVAAPPV 1152
Query: 820 GAPXXXXRGPPXXXXPPXGPPXGPGLXGRXXPPRXXAPPPPXRE 951
AP P P P G+ P P PP E
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSE 1196
Score = 38.7 bits (86), Expect = 0.001
Identities = 30/98 (30%), Positives = 31/98 (31%), Gaps = 1/98 (1%)
Frame = +1
Query: 652 PPXXXPPXGPPXPXNAGXPAPAPXXPXXGP-APPXXPLSRXGXXPAPXPGGXXHPPXGAP 828
PP P PP P P P P P APP P P P G PP AP
Sbjct: 1032 PPIPVPSTAPPVPIPTSTP-PVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGA--PPVPAP 1088
Query: 829 XXXXRGPPXXXXPPXGPPXGPGLXGRXXPPRXXAPPPP 942
P P P P + P APP P
Sbjct: 1089 SGIPPVPKPSVAAP--PVPKPSVAVPPVPAPSGAPPVP 1124
Score = 38.7 bits (86), Expect = 0.001
Identities = 33/108 (30%), Positives = 34/108 (31%), Gaps = 8/108 (7%)
Frame = +1
Query: 643 PPXP-PXXXPPXGPPXPXNAGXPAP--APXXPXXGPAPPXXPLSRXGXXPAPXP--GGXX 807
PP P P PP P PAP AP P A P P G P P P G
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
Query: 808 HPPXGAPXXXXR---GPPXXXXPPXGPPXGPGLXGRXXPPRXXAPPPP 942
PP + G P P PP G P A PP
Sbjct: 1191 VPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 38.3 bits (85), Expect = 0.002
Identities = 31/98 (31%), Positives = 32/98 (32%), Gaps = 1/98 (1%)
Frame = +1
Query: 652 PPXXXPPXGPPXPXNAGXPAPAPXXPXXGPAPPXXPLSRXGXXPAPXPGGXXHPPXGAPX 831
PP P PP P + AP P APP P P P P G PP P
Sbjct: 1112 PPVPAPSGAPPVPKPS---VAAPPVPVPSGAPPV-PKPSVAAPPVPAPSGA--PP--VPK 1163
Query: 832 XXXRGPPXXXXPPXGPP-XGPGLXGRXXPPRXXAPPPP 942
PP PP P PP APP P
Sbjct: 1164 PSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVP 1201
Score = 37.9 bits (84), Expect = 0.002
Identities = 37/107 (34%), Positives = 38/107 (35%), Gaps = 7/107 (6%)
Frame = +1
Query: 643 PPXP-PXXXPPXGPPXPXNAGXPAP----APXXPXXGPAPPXXPLSRXGXXPAPXPGGXX 807
PP P P PP P P A P P AP P A P P + G P P P
Sbjct: 1112 PPVPAPSGAPPV--PKPSVAAPPVPVPSGAPPVPKPSVAAPPVP-APSGAPPVPKP-SVA 1167
Query: 808 HPPXGAPXXXXRGPPXXXXPPXG-PPXGPGLXGRXXP-PRXXAPPPP 942
PP AP G P P G PP P P P PP P
Sbjct: 1168 APPVPAP---SSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVP 1211
Score = 37.1 bits (82), Expect = 0.004
Identities = 27/105 (25%), Positives = 32/105 (30%), Gaps = 1/105 (0%)
Frame = +1
Query: 631 PPRXPPXPPXXXPPXGPPXPXNAGX-PAPAPXXPXXGPAPPXXPLSRXGXXPAPXPGGXX 807
P PP P P P A PAP+ P P+ P+ + P P
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSG 1119
Query: 808 HPPXGAPXXXXRGPPXXXXPPXGPPXGPGLXGRXXPPRXXAPPPP 942
PP P PP P P + P APP P
Sbjct: 1120 APP--VPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVP 1162
Score = 36.3 bits (80), Expect = 0.006
Identities = 34/110 (30%), Positives = 35/110 (31%), Gaps = 6/110 (5%)
Frame = +1
Query: 631 PPRXPPXP-PXXXPPXGPPXPXNAGXPAPAPXXPXXG-PAP---PXXPLSRXGXXPAPXP 795
P PP P P PP P P A P P P PAP P P P P P
Sbjct: 1079 PSGAPPVPAPSGIPPV--PKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Query: 796 GGXXHPPXGAPXXXXRGPPXXXXPPXGPPXGPGLXGRXXP-PRXXAPPPP 942
G PP P PP P P + P P PP P
Sbjct: 1137 SGA--PP--VPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP 1182
Score = 32.3 bits (70), Expect = 0.10
Identities = 30/105 (28%), Positives = 31/105 (29%), Gaps = 3/105 (2%)
Frame = +1
Query: 637 RXPPXPPXXXPPXGPPXPXNAGXPAPAPXXPXXGPAP---PXXPLSRXGXXPAPXPGGXX 807
R PP P P P P P P P P P P S G AP
Sbjct: 1010 RVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAP------ 1063
Query: 808 HPPXGAPXXXXRGPPXXXXPPXGPPXGPGLXGRXXPPRXXAPPPP 942
PP AP P P G P P G P+ PP
Sbjct: 1064 -PPVPAPSSEIPSIP----APSGAPPVPAPSGIPPVPKPSVAAPP 1103
Score = 30.7 bits (66), Expect = 0.31
Identities = 27/101 (26%), Positives = 28/101 (27%), Gaps = 3/101 (2%)
Frame = +1
Query: 646 PXPPXXXPPXGPPXPXNAGXPAPA---PXXPXXGPAPPXXPLSRXGXXPAPXPGGXXHPP 816
P P PP P P PA P P APP P G P P P P
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP-VPKPSVGVPPVPPPSTAPPVP 1220
Query: 817 XGAPXXXXRGPPXXXXPPXGPPXGPGLXGRXXPPRXXAPPP 939
+ P PP P PR P P
Sbjct: 1221 TPSAGLPPVPVPTAKAPPVPAPSSEA--PSVSTPRSSVPSP 1259
Score = 28.3 bits (60), Expect = 1.7
Identities = 22/62 (35%), Positives = 22/62 (35%)
Frame = +1
Query: 643 PPXPPXXXPPXGPPXPXNAGXPAPAPXXPXXGPAPPXXPLSRXGXXPAPXPGGXXHPPXG 822
P PP PP P P P P P APP P G P P P PP
Sbjct: 1190 PVPPPSEAPPV--PKPSVGVPPVPPP-----STAPP-VPTPSAGLPPVPVPTAKA-PPVP 1240
Query: 823 AP 828
AP
Sbjct: 1241 AP 1242
Score = 27.5 bits (58), Expect = 2.9
Identities = 25/88 (28%), Positives = 27/88 (30%), Gaps = 3/88 (3%)
Frame = +1
Query: 688 PXNAGXPAPAPXXPXXGPAPPXXPLSRXGXXPAPXPGGXXHPPXGAPXXXXRGPPXXXXP 867
P N G A P PP P+S P P HPP P P
Sbjct: 951 PSNDGRKASGPRPAAPPSIPPPLPVSNILSSPTSEP-PKDHPPSAPLSKPVSTSP--AAP 1007
Query: 868 PXGPPXGPGLXGRXXP---PRXXAPPPP 942
P P L + P P APP P
Sbjct: 1008 LARVPPVPKLSSKAPPVPLPSADAPPIP 1035
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 38.7 bits (86), Expect = 0.001
Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Frame = +1
Query: 631 PPRXPPX--PPXXXPPXGPPXPXNAGXPAPAPXXPXXGPAPPXXPLSRXGXXPAPXPG 798
PP P PP P PP P + P AP P P+ P PL P PG
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPG 1747
Score = 31.1 bits (67), Expect = 0.24
Identities = 16/58 (27%), Positives = 18/58 (31%)
Frame = +1
Query: 622 GRXPPRXPPXPPXXXPPXGPPXPXNAGXPAPAPXXPXXGPAPPXXPLSRXGXXPAPXP 795
G P P P P P +A P P P P+ P P P P P
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 28.7 bits (61), Expect = 1.3
Identities = 19/67 (28%), Positives = 24/67 (35%), Gaps = 6/67 (8%)
Frame = +1
Query: 643 PPXPPXXXPPXGPPXPXNAGXPA-----PAPXXPXXGPAPPXXP-LSRXGXXPAPXPGGX 804
PP P PP P P + P+ P+ P P+ P S P+P P
Sbjct: 1478 PPAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPATAPSSTLPPSQSSFAHVPSPAPPAP 1537
Query: 805 XHPPXGA 825
HP A
Sbjct: 1538 QHPSAAA 1544
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 38.7 bits (86), Expect = 0.001
Identities = 26/80 (32%), Positives = 26/80 (32%), Gaps = 2/80 (2%)
Frame = +1
Query: 709 APAPXXPXXGPAPPXXPLSRXGXXPAPXPGGXXHPPXGAPXXXXRGPPXXXX--PPXGPP 882
APAP P PP R P P P P AP PP P PP
Sbjct: 127 APAPPTPQSELRPPTSAPPRPSIPP-PSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Query: 883 XGPGLXGRXXPPRXXAPPPP 942
P L P PPPP
Sbjct: 186 SAPSLPSAVPPMPPKVPPPP 205
Score = 37.5 bits (83), Expect = 0.003
Identities = 28/98 (28%), Positives = 33/98 (33%), Gaps = 2/98 (2%)
Frame = +1
Query: 631 PPRXPPXPPXXXPPXGPPXPXNAGXPAPA--PXXPXXGPAPPXXPLSRXGXXPAPXPGGX 804
P + PP P PP P P + AP+ P P P PLS+ AP
Sbjct: 161 PSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQ-----APVANTS 215
Query: 805 XHPPXGAPXXXXRGPPXXXXPPXGPPXGPGLXGRXXPP 918
P AP P P P GP + PP
Sbjct: 216 SRPSSFAP-PAGHAPNVTSESPKFPNRGPSIPSASVPP 252
Score = 36.3 bits (80), Expect = 0.006
Identities = 30/90 (33%), Positives = 31/90 (34%), Gaps = 6/90 (6%)
Frame = +1
Query: 625 RXPPRXPPXP--PXXXPPXGPPXPXNAGXPAPAPXXPXXGPAPPXX-PLSRXGXXPA--P 789
R P PP P P P PP P A P P+ P PA P P S A P
Sbjct: 138 RPPTSAPPRPSIPPPSPASAPPIPSKA-PPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPP 196
Query: 790 XPGGXXHPPXG-APXXXXRGPPXXXXPPXG 876
P PP AP P PP G
Sbjct: 197 MPPKVPPPPLSQAPVANTSSRPSSFAPPAG 226
Score = 34.7 bits (76), Expect = 0.019
Identities = 29/105 (27%), Positives = 32/105 (30%), Gaps = 4/105 (3%)
Frame = +1
Query: 634 PRXPPXPP----XXXPPXGPPXPXNAGXPAPAPXXPXXGPAPPXXPLSRXGXXPAPXPGG 801
P P PP PP P + P+PA P APP P S P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPP-IPSS---LPPPAQPAA 179
Query: 802 XXHPPXGAPXXXXRGPPXXXXPPXGPPXGPGLXGRXXPPRXXAPP 936
P AP PP P P + P APP
Sbjct: 180 PVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPP 224
Score = 34.7 bits (76), Expect = 0.019
Identities = 25/85 (29%), Positives = 27/85 (31%), Gaps = 2/85 (2%)
Frame = +1
Query: 631 PPRXPPXPPXXXPPXGPPXPXNAGXPAPAPXXPXXGPAPPXXPLSRXGXXPAPXPGGXXH 810
PP P P PP P P P P AP SR AP G +
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSF-APPAGHAPN 230
Query: 811 PPXGAPXXXXRGP--PXXXXPPXGP 879
+P RGP P PP P
Sbjct: 231 VTSESPKFPNRGPSIPSASVPPVPP 255
Score = 27.9 bits (59), Expect = 2.2
Identities = 17/76 (22%), Positives = 21/76 (27%)
Frame = +1
Query: 712 PAPXXPXXGPAPPXXPLSRXGXXPAPXPGGXXHPPXGAPXXXXRGPPXXXXPPXGPPXGP 891
PA G P + + AP P PP PP P P
Sbjct: 99 PALGGLFAGGMPKLRHIGKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAP 158
Query: 892 GLXGRXXPPRXXAPPP 939
+ + P PPP
Sbjct: 159 PIPSKAPPIPSSLPPP 174
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 37.5 bits (83), Expect = 0.003
Identities = 20/44 (45%), Positives = 20/44 (45%)
Frame = -3
Query: 761 RGXXGGAGPXXGXXGAGAGXPAXXGXGGPXGGXXXGGXGGXRGG 630
RG GG G G G G G GG GG GG GG RGG
Sbjct: 15 RGGRGGFNGGRGGFGGGRGGARGGGRGGARGGR--GGRGGARGG 56
Score = 30.7 bits (66), Expect = 0.31
Identities = 20/55 (36%), Positives = 21/55 (38%)
Frame = -3
Query: 788 GAGXXPXRERGXXGGAGPXXGXXGAGAGXPAXXGXGGPXGGXXXGGXGGXRGGXR 624
G G G GG G G G G G GG GG GG G RGG +
Sbjct: 17 GRGGFNGGRGGFGGGRGGARGG-GRGGARGGRGGRGGARGGR--GGSSGGRGGAK 68
Score = 29.9 bits (64), Expect = 0.55
Identities = 19/60 (31%), Positives = 20/60 (33%)
Frame = -3
Query: 935 GGAXXLGGXXRPXRPGPXGGPXGGXXXXGGPRXXXXGAPXGGCXXPPGXGAGXXPXRERG 756
GG GG R G GG GG GG R G+ G G P R G
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGAKVIIEPHRHAG 82
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 37.5 bits (83), Expect = 0.003
Identities = 20/53 (37%), Positives = 21/53 (39%)
Frame = +1
Query: 637 RXPPXPPXXXPPXGPPXPXNAGXPAPAPXXPXXGPAPPXXPLSRXGXXPAPXP 795
+ PP PP P P P A P P P GP PP P G P P P
Sbjct: 730 KSPPPPP---PAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 37.5 bits (83), Expect = 0.003
Identities = 28/79 (35%), Positives = 28/79 (35%)
Frame = +1
Query: 706 PAPAPXXPXXGPAPPXXPLSRXGXXPAPXPGGXXHPPXGAPXXXXRGPPXXXXPPXGPPX 885
P PA P PAP P PAP GG PP P GPP PP PP
Sbjct: 735 PPPAVIVPTPAPAPIPVP------PPAPIMGGPPPPPP-PPGVAGAGPPP---PPPPPPA 784
Query: 886 GPGLXGRXXPPRXXAPPPP 942
R P A P P
Sbjct: 785 VSAGGSRYYAPAPQAEPEP 803
Score = 35.1 bits (77), Expect = 0.015
Identities = 23/78 (29%), Positives = 26/78 (33%)
Frame = +1
Query: 709 APAPXXPXXGPAPPXXPLSRXGXXPAPXPGGXXHPPXGAPXXXXRGPPXXXXPPXGPPXG 888
+P+P P P P P P AP P PP PP
Sbjct: 709 SPSPLLPDVSDTVEEQQKLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPP-PPPP 767
Query: 889 PGLXGRXXPPRXXAPPPP 942
PG+ G PP PPPP
Sbjct: 768 PGVAGAGPPP--PPPPPP 783
Score = 31.9 bits (69), Expect = 0.14
Identities = 20/60 (33%), Positives = 21/60 (35%)
Frame = +1
Query: 634 PRXPPXPPXXXPPXGPPXPXNAGXPAPAPXXPXXGPAPPXXPLSRXGXXPAPXPGGXXHP 813
P PP P PP PP P AG P P P PP + AP P P
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPP------PPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 28.7 bits (61), Expect = 1.3
Identities = 19/50 (38%), Positives = 19/50 (38%), Gaps = 7/50 (14%)
Frame = +1
Query: 631 PPRXP----PXPPXXXPPXGPPXPXNAGXPAPAPXXP---XXGPAPPXXP 759
PP P P P P PP P G P P P P GP PP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPP-PPPPPPGVAGAGPPPPPPP 781
Score = 25.8 bits (54), Expect = 9.0
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 5/38 (13%)
Frame = +1
Query: 622 GRXPPRXPPXPPXXXPPXGPPXP--XNAGXP---APAP 720
G PP PP PP PP P +AG APAP
Sbjct: 760 GPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAP 797
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 34.7 bits (76), Expect = 0.019
Identities = 24/74 (32%), Positives = 25/74 (33%)
Frame = -3
Query: 845 PRXXXXGAPXGGCXXPPGXGAGXXPXRERGXXGGAGPXXGXXGAGAGXPAXXGXGGPXGG 666
P+ P G P G G RG G G G G G GG GG
Sbjct: 119 PKTVGPKKPKGARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFG-GGSRGG 177
Query: 665 XXXGGXGGXRGGXR 624
G GG RGG R
Sbjct: 178 SRGGFRGGSRGGFR 191
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 31.5 bits (68), Expect = 0.18
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = +1
Query: 643 PPXPPXXXPPXGPPXPXNAGXPAPAPXXPXXGPAPPXXPLSRXGXXPAPXP 795
PP PP P GPP AP P GP +S PAP P
Sbjct: 1883 PPPPPMALPKAGPP------SAAPTSALPPAGPPAGATAISGNPGMPAPVP 1927
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 31.1 bits (67), Expect = 0.24
Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Frame = +1
Query: 631 PPRXPPXPPXXXPPXGPPXPX-NAGXPA-PAPXXPXXGPAP-PXXPLSRX-GXXPAPXPG 798
PP PP PP GPP N+ PA PA PAP P +R G P P P
Sbjct: 48 PP--PPSVDHSAPPSGPPPSYSNSAAPATPAASASSAAPAPAPAASQNRAYGAAPQPYPP 105
Query: 799 GXXHP 813
+P
Sbjct: 106 QGGYP 110
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 29.9 bits (64), Expect = 0.55
Identities = 30/102 (29%), Positives = 31/102 (30%), Gaps = 10/102 (9%)
Frame = +1
Query: 631 PPRXPPXPPXXXPPXG---PPXPXNAGXP----APAPXXPXXGPAPPXXPLSRXGXXPAP 789
P P PP P G PP P G P + P P PP P G P
Sbjct: 487 PGTSAPLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPAVP 546
Query: 790 -XPG--GXXHPPXGAPXXXXRGPPXXXXPPXGPPXGPGLXGR 906
PG G PP GAP P G G R
Sbjct: 547 AMPGIPGATAPP-GAPGSYNTSESSNLNAPPGVSMPNGYSNR 587
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.5 bits (63), Expect = 0.73
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 622 GRXPPRXPPXPPXXXPPXGPPXPXNAG 702
G PP PP PP PP PP P G
Sbjct: 7 GNPPP--PPPPPGFEPPSQPPPPPPPG 31
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +1
Query: 865 PPXGPPXGPGLXGRXXPPRXXAPPPP 942
PP PP P G P + PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 5.1
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +3
Query: 657 PXXPPXXPPPPXXRXXACAGPPXP 728
P PP PPPP + PP P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 28.3 bits (60), Expect = 1.7
Identities = 27/110 (24%), Positives = 29/110 (26%), Gaps = 8/110 (7%)
Frame = +1
Query: 643 PPXPPXXXPPXGPPXPXNAGXPA----PAPXXPXXGPAPPXXPLSRXGXXPAPXPGGXXH 810
PP P P P P P P P G P P+ P P
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 293
Query: 811 PPXGAPXXXXRGPPXXXXPPXGPPXGPGLXGRXXP----PRXXAPPPPXR 948
P P P PP PG P P PPPP +
Sbjct: 294 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPFK 343
Score = 27.9 bits (59), Expect = 2.2
Identities = 27/108 (25%), Positives = 28/108 (25%), Gaps = 8/108 (7%)
Frame = +1
Query: 643 PPXPPXXXPPXGPPXPXNAGXPA----PAPXXPXXGPAPPXXPLSRXGXXPAPXPGGXXH 810
PP P P P P P P P G P P+ P P
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 267
Query: 811 PPXGAPXXXXRGPPXXXXPPXGPPXGPGLXGRXXP----PRXXAPPPP 942
P P P PP PG P P PPPP
Sbjct: 268 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 27.9 bits (59), Expect = 2.2
Identities = 27/108 (25%), Positives = 28/108 (25%), Gaps = 8/108 (7%)
Frame = +1
Query: 643 PPXPPXXXPPXGPPXPXNAGXPA----PAPXXPXXGPAPPXXPLSRXGXXPAPXPGGXXH 810
PP P P P P P P P G P P+ P P
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 280
Query: 811 PPXGAPXXXXRGPPXXXXPPXGPPXGPGLXGRXXP----PRXXAPPPP 942
P P P PP PG P P PPPP
Sbjct: 281 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 5.1
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +1
Query: 787 PXPGGXXHPPXGAPXXXXRGPPXXXXPPXGPPXGPGLXGRXXPPRXXAPPP 939
P G P AP PP PP L PP PPP
Sbjct: 148 PSASGVNAPTVSAPNSMV-SPPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 26.6 bits (56), Expect = 5.1
Identities = 23/86 (26%), Positives = 23/86 (26%), Gaps = 4/86 (4%)
Frame = +1
Query: 631 PPRXPPXPPXXXPPXGPPXPXNAGXPAPAPXXPXXGPAPPXXPLSRXGXXP----APXPG 798
PP P P P A P P P G PLS P PG
Sbjct: 211 PPGFSPATPAPTSAANTPATIAATSIPPVPNVPLVGATTAVPPLSIPNVLPFTAAQHFPG 270
Query: 799 GXXHPPXGAPXXXXRGPPXXXXPPXG 876
P P G P PP G
Sbjct: 271 MPAMPMMNVPMGPG-GAPLVPPPPPG 295
>SPBC800.09 |sum2||G2/M transition checkpoint protein
Sum2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 26.6 bits (56), Expect = 5.1
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Frame = +1
Query: 787 PXPGGXXH---PPXGAPXXXXRGPPXXXXPPXGPPXGPGL 897
P P G + PP GAP P PP G P G L
Sbjct: 120 PNPYGAPYQQAPPAGAPYYMYPNAPAQFVPPGGLPLGTPL 159
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 25.8 bits (54), Expect = 9.0
Identities = 26/105 (24%), Positives = 27/105 (25%), Gaps = 2/105 (1%)
Frame = +1
Query: 634 PRXPPXPPXXXPPXGPPXPXNAGXPAPAPXXPXXGPAPPXXPLSRXGXXPAPXPGGXXHP 813
P P P PP P P P P P P P P P R P P
Sbjct: 581 PVAPEVPSVPQPPVAPVVPEAPSVPQP-PVAP-VAPEVPSVP-QRPAVPVVPEAPSVPQP 637
Query: 814 PXGAPXXXXRGPPXXXXPPXGP--PXGPGLXGRXXPPRXXAPPPP 942
P P P P P P P + P P
Sbjct: 638 PAAPVVPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQP 682
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,816,296
Number of Sequences: 5004
Number of extensions: 25289
Number of successful extensions: 285
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 152
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 485316198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -