Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_F24
         (868 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            26   0.39 
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   2.8  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   2.8  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   6.4  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   6.4  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   6.4  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    22   6.4  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 26.2 bits (55), Expect = 0.39
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -3

Query: 161 IRTLHSGFRNSPRTPTIIETVQPTSLQPVLDLSN 60
           +RT++S  RN  RT       QP   Q V+D  N
Sbjct: 217 LRTIYSRVRNLNRTHGFPNDAQPYIFQEVIDYGN 250


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +2

Query: 764 PXXXPXPPPPXXPGP 808
           P   P PPPP   GP
Sbjct: 339 PKPAPPPPPPSSSGP 353


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = -2

Query: 600 LSVFINCW*PTTW*SSVNKLFSTPQAKKSWTACSACWVG 484
           +S FI CW P    + V      P A  ++ +    W+G
Sbjct: 378 MSAFIVCWLPFFVLALVRPFLKNPDAIPAFLSSLFLWLG 416


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 487 RQLLPKVANETDPYGYIIVV 428
           R LLPK   E  PY  ++VV
Sbjct: 601 RLLLPKGKKEGMPYNVLVVV 620


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -1

Query: 397 RSFINFSVASSHE*IAQVLE 338
           RSF+ FS+  S + +A+V++
Sbjct: 296 RSFVPFSIERSSQSVAEVMD 315


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 487 RQLLPKVANETDPYGYIIVV 428
           R LLPK   E  PY  ++VV
Sbjct: 601 RLLLPKGKKEGMPYNVLVVV 620


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 6/29 (20%), Positives = 17/29 (58%)
 Frame = -3

Query: 227 DSSGAVYDVTPCHSIR*WEFRRIRTLHSG 141
           ++ G +YD++    +   E++ ++ +H G
Sbjct: 316 EAEGGIYDISNKRRLGLTEYQAVKEMHDG 344


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 249,023
Number of Sequences: 438
Number of extensions: 6080
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)